RNA–Protein interactions for RNA: ENST00000540476.5

MDM1-211, Transcript of Mdm1 nuclear protein, humanhuman

TSL 4

Gene MDM1, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-211ENST00000540476 PRPF40BQ6NWY9 871 aaKnown RBP13.02□□□□□ -0.33
MDM1-211ENST00000540476 ZNF496Q96IT1 587 aaPredicted RBP13.02□□□□□ -0.33
MDM1-211ENST00000540476 PRDM10Q9NQV6 1147 aa13.02□□□□□ -0.33
MDM1-211ENST00000540476 SCN11AQ9UI33 1791 aa13.02□□□□□ -0.33
MDM1-211ENST00000540476 SBF1O95248 1867 aa13.02□□□□□ -0.33
MDM1-211ENST00000540476 SRGNP10124 158 aa13.01□□□□□ -0.33
MDM1-211ENST00000540476 CTCFP49711 727 aaPredicted RBP13.01□□□□□ -0.33
MDM1-211ENST00000540476 CCDC93Q567U6 631 aa13.01□□□□□ -0.33
MDM1-211ENST00000540476 ZNF652Q9Y2D9 606 aa13.01□□□□□ -0.33
MDM1-211ENST00000540476 CNTNAP1P78357 1384 aa13.01□□□□□ -0.33
MDM1-211ENST00000540476 TMEM88BA6NKF7 163 aa13□□□□□ -0.33
MDM1-211ENST00000540476 NBPF5PQ86XG9 351 aaPredicted RBP13□□□□□ -0.33
MDM1-211ENST00000540476 DZIP3Q86Y13 1208 aaKnown RBP13□□□□□ -0.33
MDM1-211ENST00000540476 CCDC24Q8N4L8 307 aa13□□□□□ -0.33
MDM1-211ENST00000540476 L3MBTL3Q96JM7 780 aaPredicted RBP13□□□□□ -0.33
MDM1-211ENST00000540476 TIAM2Q8IVF5 1701 aa12.99□□□□□ -0.33
MDM1-211ENST00000540476 U2SURPO15042 1029 aaKnown RBP12.99□□□□□ -0.33
MDM1-211ENST00000540476 NPR1P16066 1061 aa12.99□□□□□ -0.33
MDM1-211ENST00000540476 CLEC4GQ6UXB4 293 aa12.99□□□□□ -0.33
MDM1-211ENST00000540476 PNMA8AQ86V59 439 aaPredicted RBP12.99□□□□□ -0.33
MDM1-211ENST00000540476 PCGF6Q9BYE7 350 aa12.99□□□□□ -0.33
MDM1-211ENST00000540476 TAF1DQ9H5J8 278 aaPredicted RBP12.99□□□□□ -0.33
MDM1-211ENST00000540476 DLEC1Q9Y238 1755 aa12.99□□□□□ -0.33
MDM1-211ENST00000540476 PASKQ96RG2 1323 aa12.98□□□□□ -0.33
MDM1-211ENST00000540476 AFDNP55196 1824 aaKnown RBP12.98□□□□□ -0.33
MDM1-211ENST00000540476 FOXN1O15353 648 aa12.98□□□□□ -0.33
MDM1-211ENST00000540476 CAMTA2O94983 1202 aa12.98□□□□□ -0.33
MDM1-211ENST00000540476 POTEIP0CG38 1075 aa12.98□□□□□ -0.33
MDM1-211ENST00000540476 POTEJP0CG39 1038 aa12.98□□□□□ -0.33
MDM1-211ENST00000540476 EAPPQ56P03 285 aaPredicted RBP12.98□□□□□ -0.33
MDM1-211ENST00000540476 RTKN2Q8IZC4 609 aa12.98□□□□□ -0.33
MDM1-211ENST00000540476 HACL1Q9UJ83 578 aa12.98□□□□□ -0.33
MDM1-211ENST00000540476 CLEC11AQ9Y240 323 aa12.98□□□□□ -0.33
MDM1-211ENST00000540476 BTBD11A6QL63 1104 aa12.97□□□□□ -0.33
MDM1-211ENST00000540476 A1BGP04217 495 aa12.97□□□□□ -0.33
MDM1-211ENST00000540476 FKBP4Q02790 459 aaKnown RBP eCLIP12.97□□□□□ -0.33
MDM1-211ENST00000540476 TPTE2Q6XPS3 522 aa12.97□□□□□ -0.33
MDM1-211ENST00000540476 IL17REQ8NFR9 667 aa12.97□□□□□ -0.33
MDM1-211ENST00000540476 RGL2O15211 777 aa12.96□□□□□ -0.33
MDM1-211ENST00000540476 ALDH1B1P30837 517 aa12.96□□□□□ -0.33
MDM1-211ENST00000540476 VEGFBP49765 207 aa12.96□□□□□ -0.33
MDM1-211ENST00000540476 MAP2K1Q02750 393 aaPredicted RBP12.96□□□□□ -0.33
MDM1-211ENST00000540476 CC2D1BQ5T0F9 858 aaKnown RBP12.96□□□□□ -0.33
MDM1-211ENST00000540476 GTF2E1P29083 439 aaPredicted RBP12.95□□□□□ -0.34
MDM1-211ENST00000540476 EPHX2P34913 555 aa12.95□□□□□ -0.34
MDM1-211ENST00000540476 JDP2Q8WYK2 163 aa12.95□□□□□ -0.34
MDM1-211ENST00000540476 KLRG2A4D1S0 409 aaPredicted RBP12.94□□□□□ -0.34
MDM1-211ENST00000540476 ABCB7O75027 752 aa12.94□□□□□ -0.34
MDM1-211ENST00000540476 ITGBL1O95965 494 aaPredicted RBP12.94□□□□□ -0.34
MDM1-211ENST00000540476 SNRPA1P09661 255 aaKnown RBP12.94□□□□□ -0.34
MDM1-211ENST00000540476 DEFB115Q30KQ5 88 aa12.94□□□□□ -0.34
MDM1-211ENST00000540476 C7orf43Q8WVR3 580 aa12.94□□□□□ -0.34
MDM1-211ENST00000540476 RTF1Q92541 710 aaKnown RBP12.94□□□□□ -0.34
MDM1-211ENST00000540476 ZNF277Q9NRM2 450 aaPredicted RBP12.94□□□□□ -0.34
MDM1-211ENST00000540476 WBP1LQ9NX94 342 aa12.94□□□□□ -0.34
MDM1-211ENST00000540476 CEMIPQ8WUJ3 1361 aa12.94□□□□□ -0.34
MDM1-211ENST00000540476 SCN7AQ01118 1682 aa12.93□□□□□ -0.34
MDM1-211ENST00000540476 RASSF10A6NK89 507 aa12.93□□□□□ -0.34
MDM1-211ENST00000540476 LBX1P52954 281 aa12.93□□□□□ -0.34
MDM1-211ENST00000540476 CNTROBQ8N137 903 aa12.93□□□□□ -0.34
MDM1-211ENST00000540476 GPC2Q8N158 579 aa12.93□□□□□ -0.34
MDM1-211ENST00000540476 CFAP53Q96M91 514 aa12.93□□□□□ -0.34
MDM1-211ENST00000540476 BEGAINQ9BUH8 593 aa12.93□□□□□ -0.34
MDM1-211ENST00000540476 ABT1Q9ULW3 272 aaKnown RBP12.93□□□□□ -0.34
MDM1-211ENST00000540476 NIP7Q9Y221 180 aaKnown RBP eCLIP12.93□□□□□ -0.34
MDM1-211ENST00000540476 KIF7Q2M1P5 1343 aa12.92□□□□□ -0.34
MDM1-211ENST00000540476 UBR2Q8IWV8 1755 aa12.92□□□□□ -0.34
MDM1-211ENST00000540476 LMOD1P29536 600 aaPredicted RBP12.92□□□□□ -0.34
MDM1-211ENST00000540476 IARSP41252 1262 aaKnown RBP12.92□□□□□ -0.34
MDM1-211ENST00000540476 CC2D2BQ6DHV5 1058 aa12.92□□□□□ -0.34
MDM1-211ENST00000540476 NUDCQ9Y266 331 aa12.92□□□□□ -0.34
MDM1-211ENST00000540476 USP16Q9Y5T5 823 aa12.92□□□□□ -0.34
MDM1-211ENST00000540476 RNF123Q5XPI4 1314 aa12.91□□□□□ -0.34
MDM1-211ENST00000540476 ZNF541Q9H0D2 1346 aa12.91□□□□□ -0.34
MDM1-211ENST00000540476 FER1L6Q2WGJ9 1857 aa12.91□□□□□ -0.34
MDM1-211ENST00000540476 FZD9O00144 591 aa12.91□□□□□ -0.34
MDM1-211ENST00000540476 PER1O15534 1290 aaPredicted RBP12.91□□□□□ -0.34
MDM1-211ENST00000540476 EIF6P56537 245 aaKnown RBP12.91□□□□□ -0.34
MDM1-211ENST00000540476 GRIPAP1Q4V328 841 aa12.91□□□□□ -0.34
MDM1-211ENST00000540476 PRKAR2BP31323 418 aa12.9□□□□□ -0.34
MDM1-211ENST00000540476 ECE1P42892 770 aa12.9□□□□□ -0.34
MDM1-211ENST00000540476 PIP4K2AP48426 406 aaPredicted RBP12.9□□□□□ -0.34
MDM1-211ENST00000540476 POLA2Q14181 598 aa12.9□□□□□ -0.34
MDM1-211ENST00000540476 MAP1SQ66K74 1059 aaPredicted RBP12.9□□□□□ -0.34
MDM1-211ENST00000540476 SYNE4Q8N205 404 aa12.9□□□□□ -0.34
MDM1-211ENST00000540476 PSMD1Q99460 953 aa12.9□□□□□ -0.34
MDM1-211ENST00000540476 NYXQ9GZU5 481 aa12.9□□□□□ -0.34
MDM1-211ENST00000540476 NPC1L1Q9UHC9 1359 aa12.9□□□□□ -0.34
MDM1-211ENST00000540476 WDR33Q9C0J8 1336 aaKnown RBP12.89□□□□□ -0.35
MDM1-211ENST00000540476 ANKRD31Q8N7Z5 1873 aa12.89□□□□□ -0.35
MDM1-211ENST00000540476 COL11A2P13942 1736 aaPredicted RBP12.89□□□□□ -0.35
MDM1-211ENST00000540476 FAM177BA6PVY3 158 aa12.89□□□□□ -0.35
MDM1-211ENST00000540476 KCNQ3O43525 872 aa12.89□□□□□ -0.35
MDM1-211ENST00000540476 PAXIP1Q6ZW49 1069 aaPredicted RBP12.89□□□□□ -0.35
MDM1-211ENST00000540476 CCER1Q8TC90 406 aaPredicted RBP12.89□□□□□ -0.35
MDM1-211ENST00000540476 TMX4Q9H1E5 349 aaPredicted RBP12.89□□□□□ -0.35
MDM1-211ENST00000540476 SCN4AP35499 1836 aa12.88□□□□□ -0.35
MDM1-211ENST00000540476 HSPA8P11142 646 aaKnown RBP12.88□□□□□ -0.35
MDM1-211ENST00000540476 CNGB1Q14028 1251 aaPredicted RBP12.88□□□□□ -0.35
MDM1-211ENST00000540476 RPGRQ92834 1020 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms