RNA–Protein interactions for RNA: ENST00000534189.1

CCDC180-213, Transcript of coiled-coil domain containing 180, humanhuman

TSL 3

Gene CCDC180, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180-213ENST00000534189 DLG5Q8TDM6 1919 aa21.41■■□□□ 1.02
CCDC180-213ENST00000534189 LMOD3Q0VAK6 560 aa21.4■■□□□ 1.02
CCDC180-213ENST00000534189 THUMPD2Q9BTF0 503 aaKnown RBP21.4■■□□□ 1.02
CCDC180-213ENST00000534189 PRAMEF22A3QJZ6 481 aa21.39■■□□□ 1.01
CCDC180-213ENST00000534189 SERPINB2P05120 415 aa21.39■■□□□ 1.01
CCDC180-213ENST00000534189 TMPOP42166 694 aaKnown RBP21.38■■□□□ 1.01
CCDC180-213ENST00000534189 CTCFP49711 727 aaPredicted RBP21.38■■□□□ 1.01
CCDC180-213ENST00000534189 BICDL1Q6ZP65 573 aa21.38■■□□□ 1.01
CCDC180-213ENST00000534189 DZIP3Q86Y13 1208 aaKnown RBP21.37■■□□□ 1.01
CCDC180-213ENST00000534189 RUNDC1Q96C34 613 aa21.37■■□□□ 1.01
CCDC180-213ENST00000534189 CNTNAP1P78357 1384 aa21.36■■□□□ 1.01
CCDC180-213ENST00000534189 EIF4A1P60842 406 aaKnown RBP21.36■■□□□ 1.01
CCDC180-213ENST00000534189 CCDC146Q8IYE0 955 aa21.36■■□□□ 1.01
CCDC180-213ENST00000534189 CAMTA2O94983 1202 aa21.35■■□□□ 1.01
CCDC180-213ENST00000534189 PIP4K2AP48426 406 aaPredicted RBP21.35■■□□□ 1.01
CCDC180-213ENST00000534189 TBC1D9BQ66K14 1250 aa21.35■■□□□ 1.01
CCDC180-213ENST00000534189 ADAMTS8Q9UP79 889 aa21.35■■□□□ 1.01
CCDC180-213ENST00000534189 ABHD8Q96I13 439 aa21.34■■□□□ 1.01
CCDC180-213ENST00000534189 SETDB2Q96T68 719 aa21.34■■□□□ 1.01
CCDC180-213ENST00000534189 BABAM1Q9NWV8 329 aa21.34■■□□□ 1.01
CCDC180-213ENST00000534189 TSPYL4Q9UJ04 414 aa21.34■■□□□ 1.01
CCDC180-213ENST00000534189 NEUROD2Q15784 382 aa21.33■■□□□ 1.01
CCDC180-213ENST00000534189 CHADLQ6NUI6 762 aa21.33■■□□□ 1.01
CCDC180-213ENST00000534189 ZNF652Q9Y2D9 606 aa21.33■■□□□ 1.01
CCDC180-213ENST00000534189 RRP7AQ9Y3A4 280 aaKnown RBP21.33■■□□□ 1.01
CCDC180-213ENST00000534189 TIAM2Q8IVF5 1701 aa21.32■■□□□ 1
CCDC180-213ENST00000534189 ZNF316A6NFI3 1004 aaPredicted RBP21.32■■□□□ 1
CCDC180-213ENST00000534189 NBPF26B4DH59 902 aa21.32■■□□□ 1
CCDC180-213ENST00000534189 DPY19L2Q6NUT2 758 aa21.32■■□□□ 1
CCDC180-213ENST00000534189 NBPF10Q6P3W6 841 aaKnown RBP21.32■■□□□ 1
CCDC180-213ENST00000534189 CLEC4GQ6UXB4 293 aa21.32■■□□□ 1
CCDC180-213ENST00000534189 NBPF15Q8N660 670 aa21.32■■□□□ 1
CCDC180-213ENST00000534189 WBP1LQ9NX94 342 aa21.32■■□□□ 1
CCDC180-213ENST00000534189 NFKBIEO00221 500 aa21.31■■□□□ 1
CCDC180-213ENST00000534189 RGS19P49795 217 aa21.31■■□□□ 1
CCDC180-213ENST00000534189 AIDAQ96BJ3 306 aa21.31■■□□□ 1
CCDC180-213ENST00000534189 CARMIL3Q8ND23 1372 aa21.31■■□□□ 1
CCDC180-213ENST00000534189 KDM3BQ7LBC6 1761 aa21.31■■□□□ 1
CCDC180-213ENST00000534189 AFDNP55196 1824 aaKnown RBP21.3■■□□□ 1
CCDC180-213ENST00000534189 RGL2O15211 777 aa21.3■■□□□ 1
CCDC180-213ENST00000534189 NPHP1O15259 732 aa21.3■■□□□ 1
CCDC180-213ENST00000534189 LBX1P52954 281 aa21.3■■□□□ 1
CCDC180-213ENST00000534189 PDZRN3Q9UPQ7 1066 aa21.3■■□□□ 1
CCDC180-213ENST00000534189 SCN7AQ01118 1682 aa21.3■■□□□ 1
CCDC180-213ENST00000534189 PASKQ96RG2 1323 aa21.29■■□□□ 1
CCDC180-213ENST00000534189 NRXN2Q9P2S2 1712 aa21.29■■□□□ 1
CCDC180-213ENST00000534189 H0YIN7 160 aa21.29■■□□□ 1
CCDC180-213ENST00000534189 POTEIP0CG38 1075 aa21.28■■□□□ 1
CCDC180-213ENST00000534189 POTEJP0CG39 1038 aa21.28■■□□□ 1
CCDC180-213ENST00000534189 VEGFBP49765 207 aa21.28■■□□□ 1
CCDC180-213ENST00000534189 C2CD5Q86YS7 1000 aa21.28■■□□□ 1
CCDC180-213ENST00000534189 BRIP1Q9BX63 1249 aa21.28■■□□□ 1
CCDC180-213ENST00000534189 CCDC88AQ3V6T2 1871 aa21.28■■□□□ 1
CCDC180-213ENST00000534189 PDE6BP35913 854 aa21.27■■□□□ 1
CCDC180-213ENST00000534189 MLLT1Q03111 559 aaPredicted RBP21.27■■□□□ 1
CCDC180-213ENST00000534189 PRR5LQ6MZQ0 368 aa21.27■■□□□ 1
CCDC180-213ENST00000534189 TTLL6Q8N841 843 aa21.27■■□□□ 1
CCDC180-213ENST00000534189 CNBD1Q8NA66 436 aa21.27■■□□□ 1
CCDC180-213ENST00000534189 LAMB4A4D0S4 1761 aa21.26■□□□□ 0.99
CCDC180-213ENST00000534189 ST5P78524 1137 aa21.26■□□□□ 0.99
CCDC180-213ENST00000534189 NGEFQ8N5V2 710 aa21.26■□□□□ 0.99
CCDC180-213ENST00000534189 TRIM35Q9UPQ4 493 aa21.26■□□□□ 0.99
CCDC180-213ENST00000534189 ERBB4Q15303 1308 aa21.26■□□□□ 0.99
CCDC180-213ENST00000534189 DLEC1Q9Y238 1755 aa21.25■□□□□ 0.99
CCDC180-213ENST00000534189 BCORQ6W2J9 1755 aa21.24■□□□□ 0.99
CCDC180-213ENST00000534189 CHL1O00533 1208 aa21.24■□□□□ 0.99
CCDC180-213ENST00000534189 HSPA8P11142 646 aaKnown RBP21.24■□□□□ 0.99
CCDC180-213ENST00000534189 MYL6BP14649 208 aa21.24■□□□□ 0.99
CCDC180-213ENST00000534189 KIF6Q6ZMV9 814 aa21.24■□□□□ 0.99
CCDC180-213ENST00000534189 NBPF5PQ86XG9 351 aaPredicted RBP21.24■□□□□ 0.99
CCDC180-213ENST00000534189 NIP7Q9Y221 180 aaKnown RBP eCLIP21.24■□□□□ 0.99
CCDC180-213ENST00000534189 LAS1LQ9Y4W2 734 aaKnown RBP21.24■□□□□ 0.99
CCDC180-213ENST00000534189 ERVV-1B6SEH8 477 aa21.23■□□□□ 0.99
CCDC180-213ENST00000534189 CCDC24Q8N4L8 307 aa21.23■□□□□ 0.99
CCDC180-213ENST00000534189 APAF1O14727 1248 aa21.22■□□□□ 0.99
CCDC180-213ENST00000534189 ANP32CO43423 234 aa21.22■□□□□ 0.99
CCDC180-213ENST00000534189 EIF2S2P20042 333 aaKnown RBP21.22■□□□□ 0.99
CCDC180-213ENST00000534189 HLFQ16534 295 aa21.22■□□□□ 0.99
CCDC180-213ENST00000534189 TPTE2Q6XPS3 522 aa21.22■□□□□ 0.99
CCDC180-213ENST00000534189 TMEM88BA6NKF7 163 aa21.21■□□□□ 0.99
CCDC180-213ENST00000534189 ERFEQ4G0M1 354 aa21.21■□□□□ 0.99
CCDC180-213ENST00000534189 ZNF622Q969S3 477 aaKnown RBP eCLIP21.21■□□□□ 0.99
CCDC180-213ENST00000534189 MAP3K15Q6ZN16 1313 aa21.21■□□□□ 0.99
CCDC180-213ENST00000534189 ITGBL1O95965 494 aaPredicted RBP21.2■□□□□ 0.98
CCDC180-213ENST00000534189 TTLL7Q6ZT98 887 aa21.2■□□□□ 0.98
CCDC180-213ENST00000534189 DICER1Q9UPY3 1922 aaKnown RBP21.19■□□□□ 0.98
CCDC180-213ENST00000534189 DDNO94850 711 aaPredicted RBP21.19■□□□□ 0.98
CCDC180-213ENST00000534189 GTF2E1P29083 439 aaPredicted RBP21.19■□□□□ 0.98
CCDC180-213ENST00000534189 CALD1Q05682 793 aaKnown RBP21.19■□□□□ 0.98
CCDC180-213ENST00000534189 LDHDQ86WU2 507 aa21.19■□□□□ 0.98
CCDC180-213ENST00000534189 CFAP44Q96MT7 982 aa21.19■□□□□ 0.98
CCDC180-213ENST00000534189 RASSF10A6NK89 507 aa21.17■□□□□ 0.98
CCDC180-213ENST00000534189 FAM177BA6PVY3 158 aa21.17■□□□□ 0.98
CCDC180-213ENST00000534189 STYK1Q6J9G0 422 aa21.17■□□□□ 0.98
CCDC180-213ENST00000534189 CNKSR1Q969H4 720 aa21.17■□□□□ 0.98
CCDC180-213ENST00000534189 NYXQ9GZU5 481 aa21.17■□□□□ 0.98
CCDC180-213ENST00000534189 ZBTB3Q9H5J0 574 aa21.17■□□□□ 0.98
CCDC180-213ENST00000534189 LTBP3Q9NS15 1303 aa21.16■□□□□ 0.98
CCDC180-213ENST00000534189 CCDC85CA6NKD9 419 aa21.16■□□□□ 0.98
CCDC180-213ENST00000534189 CCDC184Q52MB2 194 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms