RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 BRPF1P55201 1214 aaPredicted RBP12.52□□□□□ -0.41
COLCA1-203ENST00000532918 PPFIBP1Q86W92 1011 aa12.52□□□□□ -0.41
COLCA1-203ENST00000532918 LRRFIP2Q9Y608 721 aaKnown RBP12.52□□□□□ -0.41
COLCA1-203ENST00000532918 SPDYE4A6NLX3 237 aa12.52□□□□□ -0.41
COLCA1-203ENST00000532918 DEF6Q9H4E7 631 aa12.52□□□□□ -0.41
COLCA1-203ENST00000532918 UGGT2Q9NYU1 1516 aa12.52□□□□□ -0.41
COLCA1-203ENST00000532918 CBFA2T2O43439 604 aa12.52□□□□□ -0.41
COLCA1-203ENST00000532918 IBSPP21815 317 aaPredicted RBP12.52□□□□□ -0.41
COLCA1-203ENST00000532918 UBE3BQ7Z3V4 1068 aa12.52□□□□□ -0.41
COLCA1-203ENST00000532918 TRIM5Q9C035 493 aa12.52□□□□□ -0.41
COLCA1-203ENST00000532918 FLT4P35916 1363 aa12.51□□□□□ -0.41
COLCA1-203ENST00000532918 ADAMTS12P58397 1594 aa12.51□□□□□ -0.41
COLCA1-203ENST00000532918 FANCIQ9NVI1 1328 aa12.51□□□□□ -0.41
COLCA1-203ENST00000532918 TRAPPC3LQ5T215 181 aa12.51□□□□□ -0.41
COLCA1-203ENST00000532918 DCAF5Q96JK2 942 aa12.51□□□□□ -0.41
COLCA1-203ENST00000532918 PLCD4Q9BRC7 762 aa12.51□□□□□ -0.41
COLCA1-203ENST00000532918 ATP5J2-PTCD1G3V325 749 aa12.51□□□□□ -0.41
COLCA1-203ENST00000532918 EVI5LQ96CN4 794 aa12.51□□□□□ -0.41
COLCA1-203ENST00000532918 SSH1Q8WYL5 1049 aa12.51□□□□□ -0.41
COLCA1-203ENST00000532918 SIRT1Q96EB6 747 aa12.51□□□□□ -0.41
COLCA1-203ENST00000532918 ZC3H12CQ9C0D7 883 aaKnown RBP12.51□□□□□ -0.41
COLCA1-203ENST00000532918 SERPINC1P01008 464 aa12.5□□□□□ -0.41
COLCA1-203ENST00000532918 CCDC150Q8NCX0 1101 aa12.5□□□□□ -0.41
COLCA1-203ENST00000532918 ERCC4Q92889 916 aaPredicted RBP12.5□□□□□ -0.41
COLCA1-203ENST00000532918 ERLIN2O94905 339 aa12.5□□□□□ -0.41
COLCA1-203ENST00000532918 DZIP3Q86Y13 1208 aaKnown RBP12.5□□□□□ -0.41
COLCA1-203ENST00000532918 CCDC8Q9H0W5 538 aaPredicted RBP12.5□□□□□ -0.41
COLCA1-203ENST00000532918 RPRD2Q5VT52 1461 aaKnown RBP12.5□□□□□ -0.41
COLCA1-203ENST00000532918 CCDC194A0A1B0GVG4 234 aa12.5□□□□□ -0.41
COLCA1-203ENST00000532918 K7ELQ4 463 aaPredicted RBP12.5□□□□□ -0.41
COLCA1-203ENST00000532918 ANKRD2Q9GZV1 360 aa12.5□□□□□ -0.41
COLCA1-203ENST00000532918 KAT14Q9H8E8 782 aa12.5□□□□□ -0.41
COLCA1-203ENST00000532918 IFIT3O14879 490 aaKnown RBP12.5□□□□□ -0.41
COLCA1-203ENST00000532918 CASTP20810 708 aaKnown RBP12.5□□□□□ -0.41
COLCA1-203ENST00000532918 BAG6P46379 1132 aa12.5□□□□□ -0.41
COLCA1-203ENST00000532918 RBM17Q96I25 401 aaKnown RBP12.5□□□□□ -0.41
COLCA1-203ENST00000532918 BTG4Q9NY30 223 aa12.5□□□□□ -0.41
COLCA1-203ENST00000532918 NUP153P49790 1475 aaKnown RBP12.5□□□□□ -0.41
COLCA1-203ENST00000532918 SPATA32Q96LK8 384 aa12.49□□□□□ -0.41
COLCA1-203ENST00000532918 ALDH1L1O75891 902 aa12.49□□□□□ -0.41
COLCA1-203ENST00000532918 CCDC192P0DO97 292 aa12.49□□□□□ -0.41
COLCA1-203ENST00000532918 TSG101Q99816 390 aa12.49□□□□□ -0.41
COLCA1-203ENST00000532918 TSPY26PQ9H489 355 aa12.49□□□□□ -0.41
COLCA1-203ENST00000532918 ECHDC1Q9NTX5 307 aa12.49□□□□□ -0.41
COLCA1-203ENST00000532918 KIAA0556O60303 1618 aa12.49□□□□□ -0.41
COLCA1-203ENST00000532918 TRAPPC8Q9Y2L5 1435 aa12.49□□□□□ -0.41
COLCA1-203ENST00000532918 TSPY2A6NKD2 308 aa12.49□□□□□ -0.41
COLCA1-203ENST00000532918 F6X3S4 739 aa12.49□□□□□ -0.41
COLCA1-203ENST00000532918 GCP02774 474 aa12.49□□□□□ -0.41
COLCA1-203ENST00000532918 PLCG2P16885 1265 aa12.49□□□□□ -0.41
COLCA1-203ENST00000532918 SSRP1Q08945 709 aaKnown RBP12.49□□□□□ -0.41
COLCA1-203ENST00000532918 TNMDQ9H2S6 317 aa12.49□□□□□ -0.41
COLCA1-203ENST00000532918 PI4KAP2A4QPH2 592 aa12.49□□□□□ -0.41
COLCA1-203ENST00000532918 PI4KAP1Q8N8J0 262 aa12.49□□□□□ -0.41
COLCA1-203ENST00000532918 RALGAPBQ86X10 1494 aa12.49□□□□□ -0.41
COLCA1-203ENST00000532918 ARHGEF10O15013 1369 aa12.48□□□□□ -0.41
COLCA1-203ENST00000532918 ZFYP08048 801 aaPredicted RBP12.48□□□□□ -0.41
COLCA1-203ENST00000532918 TNNI2P48788 182 aa12.48□□□□□ -0.41
COLCA1-203ENST00000532918 RARSP54136 660 aaKnown RBP12.48□□□□□ -0.41
COLCA1-203ENST00000532918 SH2B1Q9NRF2 756 aaPredicted RBP12.48□□□□□ -0.41
COLCA1-203ENST00000532918 NKTRP30414 1462 aaKnown RBP12.48□□□□□ -0.41
COLCA1-203ENST00000532918 CABLES1Q8TDN4 633 aa12.48□□□□□ -0.41
COLCA1-203ENST00000532918 HMGN5P82970 282 aaKnown RBP12.48□□□□□ -0.41
COLCA1-203ENST00000532918 GOLGA8AA7E2F4 631 aa12.47□□□□□ -0.41
COLCA1-203ENST00000532918 GOLGA8BA8MQT2 603 aa12.47□□□□□ -0.41
COLCA1-203ENST00000532918 CETN2P41208 172 aa12.47□□□□□ -0.41
COLCA1-203ENST00000532918 NLRP5P59047 1200 aa12.47□□□□□ -0.41
COLCA1-203ENST00000532918 FGFR1OPO95684 399 aaKnown RBP12.47□□□□□ -0.41
COLCA1-203ENST00000532918 NEFHP12036 1026 aa12.47□□□□□ -0.41
COLCA1-203ENST00000532918 PRPF40BQ6NWY9 871 aaKnown RBP12.47□□□□□ -0.41
COLCA1-203ENST00000532918 XAGE3Q8WTP9 111 aa12.47□□□□□ -0.41
COLCA1-203ENST00000532918 PRPF40AO75400 957 aaKnown RBP12.47□□□□□ -0.41
COLCA1-203ENST00000532918 MFSD6Q6ZSS7 791 aa12.47□□□□□ -0.41
COLCA1-203ENST00000532918 STXBP4Q6ZWJ1 553 aa12.47□□□□□ -0.41
COLCA1-203ENST00000532918 SEPT11Q9NVA2 429 aaKnown RBP12.46□□□□□ -0.41
COLCA1-203ENST00000532918 CCNL1Q9UK58 526 aaPredicted RBP12.46□□□□□ -0.41
COLCA1-203ENST00000532918 SMTNL1A8MU46 457 aa12.46□□□□□ -0.41
COLCA1-203ENST00000532918 MBIPQ9NS73 344 aa12.46□□□□□ -0.41
COLCA1-203ENST00000532918 FBXO3Q9UK99 471 aa12.46□□□□□ -0.41
COLCA1-203ENST00000532918 UNC13AQ9UPW8 1703 aa12.46□□□□□ -0.41
COLCA1-203ENST00000532918 GOLIM4O00461 696 aa12.46□□□□□ -0.42
COLCA1-203ENST00000532918 NPATQ14207 1427 aa12.46□□□□□ -0.42
COLCA1-203ENST00000532918 ATP2B3Q16720 1220 aa12.46□□□□□ -0.42
COLCA1-203ENST00000532918 LEKR1Q6ZMV7 388 aa12.46□□□□□ -0.42
COLCA1-203ENST00000532918 COPS6Q7L5N1 327 aa12.46□□□□□ -0.42
COLCA1-203ENST00000532918 WDR62O43379 1518 aa12.45□□□□□ -0.42
COLCA1-203ENST00000532918 IL15P40933 162 aaPredicted RBP12.45□□□□□ -0.42
COLCA1-203ENST00000532918 GRM1Q13255 1194 aa12.45□□□□□ -0.42
COLCA1-203ENST00000532918 IL27Q8NEV9 243 aa12.45□□□□□ -0.42
COLCA1-203ENST00000532918 IP6K1Q92551 441 aa12.45□□□□□ -0.42
COLCA1-203ENST00000532918 TTLL5Q6EMB2 1281 aa12.45□□□□□ -0.42
COLCA1-203ENST00000532918 KSR2Q6VAB6 950 aa12.45□□□□□ -0.42
COLCA1-203ENST00000532918 C8orf76Q96K31 380 aa12.45□□□□□ -0.42
COLCA1-203ENST00000532918 DRC1Q96MC2 740 aa12.45□□□□□ -0.42
COLCA1-203ENST00000532918 GNPATO15228 680 aa12.45□□□□□ -0.42
COLCA1-203ENST00000532918 PYM1Q9BRP8 204 aaKnown RBP12.45□□□□□ -0.42
COLCA1-203ENST00000532918 TSPYL1Q9H0U9 437 aa12.45□□□□□ -0.42
COLCA1-203ENST00000532918 USP8P40818 1118 aa12.45□□□□□ -0.42
COLCA1-203ENST00000532918 USP21Q9UK80 565 aa12.45□□□□□ -0.42
COLCA1-203ENST00000532918 ABCC1P33527 1531 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms