RNA–Protein interactions for RNA: ENST00000529098.5

PDZD3-210, Transcript of PDZ domain containing 3, humanhuman

TSL 2

Gene PDZD3, Length 2,532 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-210ENST00000529098 RBM43Q6ZSC3 357 aaKnown RBP21.29■■□□□ 1
PDZD3-210ENST00000529098 CHMP4AQ9BY43 222 aa21.29■■□□□ 1
PDZD3-210ENST00000529098 SNX14Q9Y5W7 946 aa21.29■■□□□ 1
PDZD3-210ENST00000529098 FHOD1Q9Y613 1164 aa21.29■■□□□ 1
PDZD3-210ENST00000529098 TRERF1Q96PN7 1200 aa21.29■■□□□ 1
PDZD3-210ENST00000529098 KCND1Q9NSA2 647 aa21.29■■□□□ 1
PDZD3-210ENST00000529098 LIG1P18858 919 aa21.28■■□□□ 1
PDZD3-210ENST00000529098 KRT85P78386 507 aa21.28■■□□□ 1
PDZD3-210ENST00000529098 CAVIN2O95810 425 aa21.28■■□□□ 1
PDZD3-210ENST00000529098 MUM1L1Q5H9M0 696 aa21.28■■□□□ 1
PDZD3-210ENST00000529098 TEX35Q5T0J7 233 aa21.28■■□□□ 1
PDZD3-210ENST00000529098 HDGFL2Q7Z4V5 671 aaPredicted RBP21.28■■□□□ 1
PDZD3-210ENST00000529098 EXOC6BQ9Y2D4 811 aa21.28■■□□□ 1
PDZD3-210ENST00000529098 TTC6Q86TZ1 520 aa21.27■■□□□ 1
PDZD3-210ENST00000529098 CKAP2LQ8IYA6 745 aa21.27■■□□□ 1
PDZD3-210ENST00000529098 DDX19AQ9NUU7 478 aaKnown RBP21.27■■□□□ 1
PDZD3-210ENST00000529098 AOX1Q06278 1338 aa21.27■■□□□ 1
PDZD3-210ENST00000529098 ZNF165P49910 485 aa21.27■■□□□ 1
PDZD3-210ENST00000529098 TXLNBQ8N3L3 684 aa21.27■■□□□ 1
PDZD3-210ENST00000529098 ALKQ9UM73 1620 aa21.27■■□□□ 1
PDZD3-210ENST00000529098 SKILP12757 684 aa21.26■□□□□ 0.99
PDZD3-210ENST00000529098 PRAM1Q96QH2 718 aa21.26■□□□□ 0.99
PDZD3-210ENST00000529098 CDK12Q9NYV4 1490 aaPredicted RBP21.26■□□□□ 0.99
PDZD3-210ENST00000529098 SARM1Q6SZW1 724 aa21.26■□□□□ 0.99
PDZD3-210ENST00000529098 GTF3C6Q969F1 213 aa21.26■□□□□ 0.99
PDZD3-210ENST00000529098 MRFAP1L1Q96HT8 127 aa21.26■□□□□ 0.99
PDZD3-210ENST00000529098 IL25Q9H293 177 aa21.26■□□□□ 0.99
PDZD3-210ENST00000529098 PLPPR3Q6T4P5 718 aa21.25■□□□□ 0.99
PDZD3-210ENST00000529098 UNC5CLQ8IV45 518 aa21.25■□□□□ 0.99
PDZD3-210ENST00000529098 CLSTN2Q9H4D0 955 aa21.25■□□□□ 0.99
PDZD3-210ENST00000529098 DACT1Q9NYF0 836 aa21.25■□□□□ 0.99
PDZD3-210ENST00000529098 MINK1Q8N4C8 1332 aaPredicted RBP21.25■□□□□ 0.99
PDZD3-210ENST00000529098 YTHDC2Q9H6S0 1430 aaKnown RBP21.25■□□□□ 0.99
PDZD3-210ENST00000529098 CCAR2Q8N163 923 aaKnown RBP21.25■□□□□ 0.99
PDZD3-210ENST00000529098 ZSCAN31Q96LW9 406 aaPredicted RBP21.25■□□□□ 0.99
PDZD3-210ENST00000529098 VPS37CA5D8V6 355 aaPredicted RBP21.24■□□□□ 0.99
PDZD3-210ENST00000529098 PNMA6AP0CW24 399 aaPredicted RBP21.24■□□□□ 0.99
PDZD3-210ENST00000529098 IL13P35225 146 aa21.24■□□□□ 0.99
PDZD3-210ENST00000529098 L2HGDHQ9H9P8 463 aa21.24■□□□□ 0.99
PDZD3-210ENST00000529098 CHMP3Q9Y3E7 222 aa21.24■□□□□ 0.99
PDZD3-210ENST00000529098 PTPRMP28827 1452 aa21.24■□□□□ 0.99
PDZD3-210ENST00000529098 FAM83GA6ND36 823 aa21.24■□□□□ 0.99
PDZD3-210ENST00000529098 GNAI2P04899 355 aa21.24■□□□□ 0.99
PDZD3-210ENST00000529098 PLA2G4AP47712 749 aa21.24■□□□□ 0.99
PDZD3-210ENST00000529098 CEBPAP49715 358 aaPredicted RBP21.24■□□□□ 0.99
PDZD3-210ENST00000529098 PAXIP1Q6ZW49 1069 aaPredicted RBP21.24■□□□□ 0.99
PDZD3-210ENST00000529098 CCDC83Q8IWF9 413 aa21.24■□□□□ 0.99
PDZD3-210ENST00000529098 LARP6Q9BRS8 491 aaKnown RBP21.24■□□□□ 0.99
PDZD3-210ENST00000529098 SH2B1Q9NRF2 756 aaPredicted RBP21.24■□□□□ 0.99
PDZD3-210ENST00000529098 HYPKQ9NX55 129 aa21.24■□□□□ 0.99
PDZD3-210ENST00000529098 KIF20BQ96Q89 1820 aa21.23■□□□□ 0.99
PDZD3-210ENST00000529098 TNNT3P45378 269 aaPredicted RBP21.23■□□□□ 0.99
PDZD3-210ENST00000529098 CCT4P50991 539 aaKnown RBP21.23■□□□□ 0.99
PDZD3-210ENST00000529098 CLCN6P51797 869 aa21.23■□□□□ 0.99
PDZD3-210ENST00000529098 TPM4P67936 248 aa21.23■□□□□ 0.99
PDZD3-210ENST00000529098 RASSF4Q9H2L5 321 aa21.23■□□□□ 0.99
PDZD3-210ENST00000529098 TTC21AQ8NDW8 1320 aa21.22■□□□□ 0.99
PDZD3-210ENST00000529098 LARGE1O95461 756 aa21.22■□□□□ 0.99
PDZD3-210ENST00000529098 YY1AP1Q9H869 796 aa21.22■□□□□ 0.99
PDZD3-210ENST00000529098 AATKQ6ZMQ8 1374 aa21.22■□□□□ 0.99
PDZD3-210ENST00000529098 GOLGA6L4A6NEF3 574 aa21.22■□□□□ 0.99
PDZD3-210ENST00000529098 SGSM2O43147 1006 aa21.22■□□□□ 0.99
PDZD3-210ENST00000529098 ERCC6LQ2NKX8 1250 aa21.22■□□□□ 0.99
PDZD3-210ENST00000529098 RASEFQ8IZ41 740 aa21.22■□□□□ 0.99
PDZD3-210ENST00000529098 DNAJC25Q9H1X3 360 aa21.22■□□□□ 0.99
PDZD3-210ENST00000529098 TTC21BQ7Z4L5 1316 aa21.21■□□□□ 0.99
PDZD3-210ENST00000529098 CCZ1BP86790 482 aa21.21■□□□□ 0.99
PDZD3-210ENST00000529098 CCZ1P86791 482 aaPredicted RBP21.21■□□□□ 0.99
PDZD3-210ENST00000529098 SCAND2PQ9GZW5 306 aaPredicted RBP21.21■□□□□ 0.99
PDZD3-210ENST00000529098 NPHP3Q7Z494 1330 aa21.21■□□□□ 0.99
PDZD3-210ENST00000529098 ARID5BQ14865 1188 aa21.21■□□□□ 0.99
PDZD3-210ENST00000529098 LSG1Q9H089 658 aaKnown RBP21.21■□□□□ 0.99
PDZD3-210ENST00000529098 TRMT1Q9NXH9 659 aaKnown RBP21.21■□□□□ 0.99
PDZD3-210ENST00000529098 DLG5Q8TDM6 1919 aa21.21■□□□□ 0.99
PDZD3-210ENST00000529098 CCDC69A6NI79 296 aa21.2■□□□□ 0.98
PDZD3-210ENST00000529098 NPHP1O15259 732 aa21.2■□□□□ 0.98
PDZD3-210ENST00000529098 DCTN1Q14203 1278 aa21.2■□□□□ 0.98
PDZD3-210ENST00000529098 GOLGA6L19H0YKK7 550 aa21.2■□□□□ 0.98
PDZD3-210ENST00000529098 VPS53Q5VIR6 699 aa21.2■□□□□ 0.98
PDZD3-210ENST00000529098 RSPH14Q9UHP6 348 aa21.2■□□□□ 0.98
PDZD3-210ENST00000529098 TNRQ92752 1358 aa21.2■□□□□ 0.98
PDZD3-210ENST00000529098 ZRANB2O95218 330 aaKnown RBP eCLIP21.19■□□□□ 0.98
PDZD3-210ENST00000529098 FILIP1Q7Z7B0 1213 aa21.19■□□□□ 0.98
PDZD3-210ENST00000529098 RGS22Q8NE09 1264 aa21.19■□□□□ 0.98
PDZD3-210ENST00000529098 ARGLU1Q9NWB6 273 aaPredicted RBP21.19■□□□□ 0.98
PDZD3-210ENST00000529098 CASTP20810 708 aaKnown RBP21.19■□□□□ 0.98
PDZD3-210ENST00000529098 CCDC93Q567U6 631 aa21.19■□□□□ 0.98
PDZD3-210ENST00000529098 WAPLQ7Z5K2 1190 aa21.19■□□□□ 0.98
PDZD3-210ENST00000529098 CHL1O00533 1208 aa21.18■□□□□ 0.98
PDZD3-210ENST00000529098 FBLN1P23142 703 aa21.18■□□□□ 0.98
PDZD3-210ENST00000529098 CERS3Q8IU89 383 aa21.18■□□□□ 0.98
PDZD3-210ENST00000529098 NEK11Q8NG66 645 aa21.18■□□□□ 0.98
PDZD3-210ENST00000529098 SLC4A2P04920 1241 aa21.18■□□□□ 0.98
PDZD3-210ENST00000529098 IQCB1Q15051 598 aa21.18■□□□□ 0.98
PDZD3-210ENST00000529098 TUBB4AP04350 444 aa21.17■□□□□ 0.98
PDZD3-210ENST00000529098 ATP8B2P98198 1209 aa21.17■□□□□ 0.98
PDZD3-210ENST00000529098 GPS2Q13227 327 aa21.17■□□□□ 0.98
PDZD3-210ENST00000529098 LARP1BQ659C4 914 aaKnown RBP21.17■□□□□ 0.98
PDZD3-210ENST00000529098 TMCO3Q6UWJ1 677 aa21.17■□□□□ 0.98
PDZD3-210ENST00000529098 TEX2Q8IWB9 1127 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms