RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 RBM42Q9BTD8 480 aaKnown RBP25.83■■□□□ 1.72
SQLE-206ENST00000523430 MSH5O43196 834 aa25.82■■□□□ 1.72
SQLE-206ENST00000523430 SRGAP3O43295 1099 aa25.82■■□□□ 1.72
SQLE-206ENST00000523430 FAM98CQ17RN3 349 aaKnown RBP25.82■■□□□ 1.72
SQLE-206ENST00000523430 BMP2KLQ5H9B9 411 aa25.82■■□□□ 1.72
SQLE-206ENST00000523430 TTLL7Q6ZT98 887 aa25.82■■□□□ 1.72
SQLE-206ENST00000523430 VSIG10Q8N0Z9 540 aa25.82■■□□□ 1.72
SQLE-206ENST00000523430 FNBP4Q8N3X1 1017 aaPredicted RBP25.82■■□□□ 1.72
SQLE-206ENST00000523430 PLBD2Q8NHP8 589 aa25.82■■□□□ 1.72
SQLE-206ENST00000523430 TJP1Q07157 1748 aa25.81■■□□□ 1.72
SQLE-206ENST00000523430 HSPA1LP34931 641 aa25.81■■□□□ 1.72
SQLE-206ENST00000523430 SLC4A9Q96Q91 983 aa25.81■■□□□ 1.72
SQLE-206ENST00000523430 GCKRQ14397 625 aa25.8■■□□□ 1.72
SQLE-206ENST00000523430 SUCLG2Q96I99 432 aa25.8■■□□□ 1.72
SQLE-206ENST00000523430 ACSBG1Q96GR2 724 aa25.79■■□□□ 1.72
SQLE-206ENST00000523430 KAZALD1Q96I82 304 aa25.79■■□□□ 1.72
SQLE-206ENST00000523430 GSPT1P15170 499 aaKnown RBP25.78■■□□□ 1.72
SQLE-206ENST00000523430 MTX1Q13505 466 aa25.78■■□□□ 1.72
SQLE-206ENST00000523430 LRRCC1Q9C099 1032 aa25.78■■□□□ 1.72
SQLE-206ENST00000523430 A0A0G2JS52 829 aa25.77■■□□□ 1.72
SQLE-206ENST00000523430 ATP5J2-PTCD1G3V325 749 aa25.77■■□□□ 1.72
SQLE-206ENST00000523430 TEX13AQ9BXU3 409 aaPredicted RBP25.77■■□□□ 1.72
SQLE-206ENST00000523430 USP21Q9UK80 565 aa25.77■■□□□ 1.72
SQLE-206ENST00000523430 IPO9Q96P70 1041 aaKnown RBP25.76■■□□□ 1.71
SQLE-206ENST00000523430 BICC1Q9H694 974 aaKnown RBP25.76■■□□□ 1.71
SQLE-206ENST00000523430 ZBTB3Q9H5J0 574 aa25.75■■□□□ 1.71
SQLE-206ENST00000523430 KAT6BQ8WYB5 2073 aa25.75■■□□□ 1.71
SQLE-206ENST00000523430 SURF6O75683 361 aaKnown RBP25.74■■□□□ 1.71
SQLE-206ENST00000523430 STARD3NLO95772 234 aa25.74■■□□□ 1.71
SQLE-206ENST00000523430 TTC22Q5TAA0 569 aa25.74■■□□□ 1.71
SQLE-206ENST00000523430 ZNF330Q9Y3S2 320 aaPredicted RBP25.74■■□□□ 1.71
SQLE-206ENST00000523430 THSD7AQ9UPZ6 1657 aa25.74■■□□□ 1.71
SQLE-206ENST00000523430 HDAC5Q9UQL6 1122 aa25.74■■□□□ 1.71
SQLE-206ENST00000523430 JARID2Q92833 1246 aaPredicted RBP25.73■■□□□ 1.71
SQLE-206ENST00000523430 CYP19A1P11511 503 aaPredicted RBP25.72■■□□□ 1.71
SQLE-206ENST00000523430 MEX3CQ5U5Q3 659 aaKnown RBP25.72■■□□□ 1.71
SQLE-206ENST00000523430 SALL3Q9BXA9 1300 aa25.72■■□□□ 1.71
SQLE-206ENST00000523430 EPHA10Q5JZY3 1008 aa25.7■■□□□ 1.71
SQLE-206ENST00000523430 UBE3BQ7Z3V4 1068 aa25.7■■□□□ 1.71
SQLE-206ENST00000523430 RAB11FIP3O75154 756 aa25.7■■□□□ 1.7
SQLE-206ENST00000523430 IL1RAPL2Q9NP60 686 aa25.7■■□□□ 1.7
SQLE-206ENST00000523430 MYT1Q01538 1121 aa25.69■■□□□ 1.7
SQLE-206ENST00000523430 ZBTB1Q9Y2K1 713 aa25.69■■□□□ 1.7
SQLE-206ENST00000523430 A0A087WZG4 1122 aa25.68■■□□□ 1.7
SQLE-206ENST00000523430 KCNQ2O43526 872 aa25.68■■□□□ 1.7
SQLE-206ENST00000523430 PDE1AP54750 535 aa25.68■■□□□ 1.7
SQLE-206ENST00000523430 MFAP1P55081 439 aaKnown RBP25.68■■□□□ 1.7
SQLE-206ENST00000523430 TSHZ3Q63HK5 1081 aa25.68■■□□□ 1.7
SQLE-206ENST00000523430 PA2G4Q9UQ80 394 aaKnown RBP25.68■■□□□ 1.7
SQLE-206ENST00000523430 CICQ96RK0 1608 aaPredicted RBP25.68■■□□□ 1.7
SQLE-206ENST00000523430 CASP7P55210 303 aa25.68■■□□□ 1.7
SQLE-206ENST00000523430 RHPN1Q8TCX5 695 aa25.68■■□□□ 1.7
SQLE-206ENST00000523430 NOP58Q9Y2X3 529 aaKnown RBP25.68■■□□□ 1.7
SQLE-206ENST00000523430 OSBPL3Q9H4L5 887 aa25.67■■□□□ 1.7
SQLE-206ENST00000523430 UPF2Q9HAU5 1272 aaKnown RBP25.67■■□□□ 1.7
SQLE-206ENST00000523430 COL15A1P39059 1388 aa25.67■■□□□ 1.7
SQLE-206ENST00000523430 TUBGCP6Q96RT7 1819 aa25.67■■□□□ 1.7
SQLE-206ENST00000523430 MX1P20591 662 aa25.66■■□□□ 1.7
SQLE-206ENST00000523430 KIF6Q6ZMV9 814 aa25.66■■□□□ 1.7
SQLE-206ENST00000523430 TBC1D9Q6ZT07 1266 aa25.66■■□□□ 1.7
SQLE-206ENST00000523430 PALLDQ8WX93 1383 aa25.66■■□□□ 1.7
SQLE-206ENST00000523430 CWC25Q9NXE8 425 aaPredicted RBP25.66■■□□□ 1.7
SQLE-206ENST00000523430 AFF2P51816 1311 aa25.66■■□□□ 1.7
SQLE-206ENST00000523430 KIF1BPQ96EK5 621 aa25.66■■□□□ 1.7
SQLE-206ENST00000523430 TBC1D32Q96NH3 1257 aa25.66■■□□□ 1.7
SQLE-206ENST00000523430 CDC45O75419 566 aa25.64■■□□□ 1.7
SQLE-206ENST00000523430 OS9Q13438 667 aaPredicted RBP25.64■■□□□ 1.7
SQLE-206ENST00000523430 HSP90AB4PQ58FF6 505 aa25.64■■□□□ 1.7
SQLE-206ENST00000523430 RREB1Q92766 1687 aa25.64■■□□□ 1.69
SQLE-206ENST00000523430 SDSP20132 328 aa25.64■■□□□ 1.69
SQLE-206ENST00000523430 LOC102724428A0A0B4J2F2 783 aa25.63■■□□□ 1.69
SQLE-206ENST00000523430 SIK1P57059 783 aa25.63■■□□□ 1.69
SQLE-206ENST00000523430 MAP3K15Q6ZN16 1313 aa25.62■■□□□ 1.69
SQLE-206ENST00000523430 H7C1W4 665 aa25.62■■□□□ 1.69
SQLE-206ENST00000523430 ATP6V1AP38606 617 aa25.62■■□□□ 1.69
SQLE-206ENST00000523430 RTL5Q5HYW3 569 aaPredicted RBP25.62■■□□□ 1.69
SQLE-206ENST00000523430 NUTM1Q86Y26 1132 aa25.62■■□□□ 1.69
SQLE-206ENST00000523430 CCDC191Q8NCU4 936 aa25.62■■□□□ 1.69
SQLE-206ENST00000523430 ISCA1Q9BUE6 129 aa25.62■■□□□ 1.69
SQLE-206ENST00000523430 ITPK1Q13572 414 aa25.62■■□□□ 1.69
SQLE-206ENST00000523430 RABL6Q3YEC7 729 aaPredicted RBP25.62■■□□□ 1.69
SQLE-206ENST00000523430 DDRGK1Q96HY6 314 aa25.62■■□□□ 1.69
SQLE-206ENST00000523430 ARXQ96QS3 562 aa25.62■■□□□ 1.69
SQLE-206ENST00000523430 TCIRG1Q13488 830 aa25.61■■□□□ 1.69
SQLE-206ENST00000523430 KLHDC4Q8TBB5 520 aa25.61■■□□□ 1.69
SQLE-206ENST00000523430 STAP2Q9UGK3 403 aa25.61■■□□□ 1.69
SQLE-206ENST00000523430 ATRNO75882 1429 aa25.61■■□□□ 1.69
SQLE-206ENST00000523430 GJD4Q96KN9 370 aaPredicted RBP25.6■■□□□ 1.69
SQLE-206ENST00000523430 ANKRD36CQ5JPF3 1778 aa25.6■■□□□ 1.69
SQLE-206ENST00000523430 COL5A3P25940 1745 aaPredicted RBP25.6■■□□□ 1.69
SQLE-206ENST00000523430 NHSQ6T4R5 1651 aa25.59■■□□□ 1.69
SQLE-206ENST00000523430 HLFQ16534 295 aa25.59■■□□□ 1.69
SQLE-206ENST00000523430 INTS5Q6P9B9 1019 aaKnown RBP25.59■■□□□ 1.69
SQLE-206ENST00000523430 SIL1Q9H173 461 aa25.59■■□□□ 1.69
SQLE-206ENST00000523430 IL6STP40189 918 aaPredicted RBP25.58■■□□□ 1.69
SQLE-206ENST00000523430 FOXO4P98177 505 aa25.58■■□□□ 1.69
SQLE-206ENST00000523430 PTF1AQ7RTS3 328 aa25.58■■□□□ 1.69
SQLE-206ENST00000523430 ERC1Q8IUD2 1116 aa25.58■■□□□ 1.69
SQLE-206ENST00000523430 CRKLP46109 303 aaKnown RBP25.57■■□□□ 1.68
SQLE-206ENST00000523430 RFX5P48382 616 aaPredicted RBP25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms