RNA–Protein interactions for RNA: ENST00000523190.5

PVT1-217, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 443 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-217ENST00000523190 SMARCC1Q92922 1105 aaPredicted RBP8.46□□□□□ -1.06
PVT1-217ENST00000523190 SRCIN1Q9C0H9 1055 aa8.46□□□□□ -1.06
PVT1-217ENST00000523190 CICQ96RK0 1608 aaPredicted RBP8.46□□□□□ -1.06
PVT1-217ENST00000523190 KAT6BQ8WYB5 2073 aa8.45□□□□□ -1.06
PVT1-217ENST00000523190 ARFGEF2Q9Y6D5 1785 aa8.45□□□□□ -1.06
PVT1-217ENST00000523190 LOC102724428A0A0B4J2F2 783 aa8.45□□□□□ -1.06
PVT1-217ENST00000523190 STARD3NLO95772 234 aa8.45□□□□□ -1.06
PVT1-217ENST00000523190 CYP19A1P11511 503 aaPredicted RBP8.45□□□□□ -1.06
PVT1-217ENST00000523190 ATP6V1AP38606 617 aa8.45□□□□□ -1.06
PVT1-217ENST00000523190 SIK1P57059 783 aa8.45□□□□□ -1.06
PVT1-217ENST00000523190 RBM6P78332 1123 aaKnown RBP8.45□□□□□ -1.06
PVT1-217ENST00000523190 ITPK1Q13572 414 aa8.45□□□□□ -1.06
PVT1-217ENST00000523190 CWF19L2Q2TBE0 894 aaKnown RBP8.45□□□□□ -1.06
PVT1-217ENST00000523190 TTLL7Q6ZT98 887 aa8.45□□□□□ -1.06
PVT1-217ENST00000523190 SKAP1Q86WV1 359 aa8.45□□□□□ -1.06
PVT1-217ENST00000523190 RWDD1Q9H446 243 aaPredicted RBP8.45□□□□□ -1.06
PVT1-217ENST00000523190 ZBTB1Q9Y2K1 713 aa8.45□□□□□ -1.06
PVT1-217ENST00000523190 ZNF330Q9Y3S2 320 aaPredicted RBP8.45□□□□□ -1.06
PVT1-217ENST00000523190 NUP188Q5SRE5 1749 aa8.45□□□□□ -1.06
PVT1-217ENST00000523190 SBF2Q86WG5 1849 aa8.45□□□□□ -1.06
PVT1-217ENST00000523190 CAPN15O75808 1086 aa8.44□□□□□ -1.06
PVT1-217ENST00000523190 ALDH1L1O75891 902 aa8.44□□□□□ -1.06
PVT1-217ENST00000523190 GNAI3P08754 354 aa8.44□□□□□ -1.06
PVT1-217ENST00000523190 HDAC1Q13547 482 aaPredicted RBP8.44□□□□□ -1.06
PVT1-217ENST00000523190 CEP85Q6P2H3 762 aa8.44□□□□□ -1.06
PVT1-217ENST00000523190 ANKRD13DQ6ZTN6 518 aa8.44□□□□□ -1.06
PVT1-217ENST00000523190 KRT27Q7Z3Y8 459 aa8.44□□□□□ -1.06
PVT1-217ENST00000523190 MYD88Q99836 296 aa8.44□□□□□ -1.06
PVT1-217ENST00000523190 METTL22Q9BUU2 404 aaPredicted RBP8.44□□□□□ -1.06
PVT1-217ENST00000523190 RREB1Q92766 1687 aa8.43□□□□□ -1.06
PVT1-217ENST00000523190 COL5A3P25940 1745 aaPredicted RBP8.43□□□□□ -1.06
PVT1-217ENST00000523190 GNAI2P04899 355 aa8.43□□□□□ -1.06
PVT1-217ENST00000523190 IGKV5-2P06315 115 aa8.43□□□□□ -1.06
PVT1-217ENST00000523190 UBTFL1P0CB47 393 aaPredicted RBP8.43□□□□□ -1.06
PVT1-217ENST00000523190 SIRT2Q8IXJ6 389 aa8.43□□□□□ -1.06
PVT1-217ENST00000523190 ANKRD44Q8N8A2 993 aa8.43□□□□□ -1.06
PVT1-217ENST00000523190 LINS1Q8NG48 757 aa8.43□□□□□ -1.06
PVT1-217ENST00000523190 PLBD2Q8NHP8 589 aa8.43□□□□□ -1.06
PVT1-217ENST00000523190 USP44Q9H0E7 712 aa8.43□□□□□ -1.06
PVT1-217ENST00000523190 ZBTB3Q9H5J0 574 aa8.43□□□□□ -1.06
PVT1-217ENST00000523190 CCDC87Q9NVE4 849 aa8.43□□□□□ -1.06
PVT1-217ENST00000523190 RGS17Q9UGC6 210 aaPredicted RBP8.43□□□□□ -1.06
PVT1-217ENST00000523190 LRRFIP2Q9Y608 721 aaKnown RBP8.43□□□□□ -1.06
PVT1-217ENST00000523190 ZNF831Q5JPB2 1677 aa8.43□□□□□ -1.06
PVT1-217ENST00000523190 NEURL1BA8MQ27 555 aa8.42□□□□□ -1.06
PVT1-217ENST00000523190 NBPF7P0C2Y1 421 aaPredicted RBP8.42□□□□□ -1.06
PVT1-217ENST00000523190 RXRBP28702 533 aa8.42□□□□□ -1.06
PVT1-217ENST00000523190 CRKLP46109 303 aaKnown RBP8.42□□□□□ -1.06
PVT1-217ENST00000523190 KCNQ4P56696 695 aa8.42□□□□□ -1.06
PVT1-217ENST00000523190 NEXNQ0ZGT2 675 aa8.42□□□□□ -1.06
PVT1-217ENST00000523190 KLHL34Q8N239 644 aa8.42□□□□□ -1.06
PVT1-217ENST00000523190 LINC00116Q8NCU8 138 aa8.42□□□□□ -1.06
PVT1-217ENST00000523190 SPOCK2Q92563 424 aa8.42□□□□□ -1.06
PVT1-217ENST00000523190 PDZRN3Q9UPQ7 1066 aa8.42□□□□□ -1.06
PVT1-217ENST00000523190 AFDNP55196 1824 aaKnown RBP8.42□□□□□ -1.06
PVT1-217ENST00000523190 LY75O60449 1722 aa8.41□□□□□ -1.06
PVT1-217ENST00000523190 ATP5J2-PTCD1G3V325 749 aa8.41□□□□□ -1.06
PVT1-217ENST00000523190 IL6STP40189 918 aaPredicted RBP8.41□□□□□ -1.06
PVT1-217ENST00000523190 INTS5Q6P9B9 1019 aaKnown RBP8.41□□□□□ -1.06
PVT1-217ENST00000523190 POTEAQ6S8J7 498 aa8.41□□□□□ -1.06
PVT1-217ENST00000523190 KIF6Q6ZMV9 814 aa8.41□□□□□ -1.06
PVT1-217ENST00000523190 FAM196AQ6ZSG2 479 aa8.41□□□□□ -1.06
PVT1-217ENST00000523190 RPAP2Q8IXW5 612 aaPredicted RBP8.41□□□□□ -1.06
PVT1-217ENST00000523190 SMC5Q8IY18 1101 aa8.41□□□□□ -1.06
PVT1-217ENST00000523190 ARXQ96QS3 562 aa8.41□□□□□ -1.06
PVT1-217ENST00000523190 C9orf78Q9NZ63 289 aaPredicted RBP8.41□□□□□ -1.06
PVT1-217ENST00000523190 MAP3K15Q6ZN16 1313 aa8.4□□□□□ -1.06
PVT1-217ENST00000523190 GRM8O00222 908 aa8.4□□□□□ -1.06
PVT1-217ENST00000523190 TRIM37O94972 964 aa8.4□□□□□ -1.06
PVT1-217ENST00000523190 RGS3P49796 1198 aa8.4□□□□□ -1.06
PVT1-217ENST00000523190 GCKRQ14397 625 aa8.4□□□□□ -1.06
PVT1-217ENST00000523190 DZIP3Q86Y13 1208 aaKnown RBP8.4□□□□□ -1.06
PVT1-217ENST00000523190 BBXQ8WY36 941 aaPredicted RBP8.4□□□□□ -1.06
PVT1-217ENST00000523190 SUCLG2Q96I99 432 aa8.4□□□□□ -1.06
PVT1-217ENST00000523190 BCL11BQ9C0K0 894 aaPredicted RBP8.4□□□□□ -1.06
PVT1-217ENST00000523190 CCNL1Q9UK58 526 aaPredicted RBP8.4□□□□□ -1.06
PVT1-217ENST00000523190 COL15A1P39059 1388 aa8.39□□□□□ -1.07
PVT1-217ENST00000523190 IBTKQ9P2D0 1353 aaPredicted RBP8.39□□□□□ -1.07
PVT1-217ENST00000523190 UTYO14607 1347 aa8.39□□□□□ -1.07
PVT1-217ENST00000523190 CNTNAP4Q9C0A0 1308 aa8.39□□□□□ -1.07
PVT1-217ENST00000523190 PNMA6EA0A0J9YXQ4 647 aa8.39□□□□□ -1.07
PVT1-217ENST00000523190 HMMRO75330 724 aa8.39□□□□□ -1.07
PVT1-217ENST00000523190 EIF5P55010 431 aaKnown RBP8.39□□□□□ -1.07
PVT1-217ENST00000523190 ATP8B2P98198 1209 aa8.39□□□□□ -1.07
PVT1-217ENST00000523190 HLFQ16534 295 aa8.39□□□□□ -1.07
PVT1-217ENST00000523190 NPM2Q86SE8 214 aaKnown RBP8.39□□□□□ -1.07
PVT1-217ENST00000523190 JARID2Q92833 1246 aaPredicted RBP8.39□□□□□ -1.07
PVT1-217ENST00000523190 GCC1Q96CN9 775 aa8.39□□□□□ -1.07
PVT1-217ENST00000523190 ISCA1Q9BUE6 129 aa8.39□□□□□ -1.07
PVT1-217ENST00000523190 TBC1D2BQ9UPU7 963 aa8.39□□□□□ -1.07
PVT1-217ENST00000523190 MYH14Q7Z406 1995 aaKnown RBP8.39□□□□□ -1.07
PVT1-217ENST00000523190 ANKRD36CQ5JPF3 1778 aa8.38□□□□□ -1.07
PVT1-217ENST00000523190 A0A087WZG4 1122 aa8.38□□□□□ -1.07
PVT1-217ENST00000523190 C1QBPQ07021 282 aaKnown RBP8.38□□□□□ -1.07
PVT1-217ENST00000523190 TCIRG1Q13488 830 aa8.38□□□□□ -1.07
PVT1-217ENST00000523190 GIGYF2Q6Y7W6 1299 aaKnown RBP8.38□□□□□ -1.07
PVT1-217ENST00000523190 UBE3BQ7Z3V4 1068 aa8.38□□□□□ -1.07
PVT1-217ENST00000523190 PPP1R42Q7Z4L9 355 aa8.38□□□□□ -1.07
PVT1-217ENST00000523190 CWC25Q9NXE8 425 aaPredicted RBP8.38□□□□□ -1.07
PVT1-217ENST00000523190 TAF1LQ8IZX4 1826 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms