RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 PPP1R42Q7Z4L9 355 aa16■□□□□ 0.15
PVT1-203ENST00000513868 ACSBG1Q96GR2 724 aa16■□□□□ 0.15
PVT1-203ENST00000513868 MYD88Q99836 296 aa16■□□□□ 0.15
PVT1-203ENST00000513868 C9orf78Q9NZ63 289 aaPredicted RBP16■□□□□ 0.15
PVT1-203ENST00000513868 MYH14Q7Z406 1995 aaKnown RBP16■□□□□ 0.15
PVT1-203ENST00000513868 RREB1Q92766 1687 aa16■□□□□ 0.15
PVT1-203ENST00000513868 SBF2Q86WG5 1849 aa16■□□□□ 0.15
PVT1-203ENST00000513868 NEXNQ0ZGT2 675 aa15.99■□□□□ 0.15
PVT1-203ENST00000513868 MTX1Q13505 466 aa15.99■□□□□ 0.15
PVT1-203ENST00000513868 GCKRQ14397 625 aa15.99■□□□□ 0.15
PVT1-203ENST00000513868 KAZALD1Q96I82 304 aa15.99■□□□□ 0.15
PVT1-203ENST00000513868 ZNF831Q5JPB2 1677 aa15.99■□□□□ 0.15
PVT1-203ENST00000513868 NUP98P52948 1817 aa15.99■□□□□ 0.15
PVT1-203ENST00000513868 SMARCA5O60264 1052 aaPredicted RBP15.99■□□□□ 0.15
PVT1-203ENST00000513868 CYP19A1P11511 503 aaPredicted RBP15.99■□□□□ 0.15
PVT1-203ENST00000513868 C16orf71Q8IYS4 520 aaPredicted RBP15.99■□□□□ 0.15
PVT1-203ENST00000513868 COL5A3P25940 1745 aaPredicted RBP15.98■□□□□ 0.15
PVT1-203ENST00000513868 ANKRD36CQ5JPF3 1778 aa15.98■□□□□ 0.15
PVT1-203ENST00000513868 STARD3NLO95772 234 aa15.98■□□□□ 0.15
PVT1-203ENST00000513868 PLEKHM2Q8IWE5 1019 aa15.98■□□□□ 0.15
PVT1-203ENST00000513868 EXOC6BQ9Y2D4 811 aa15.98■□□□□ 0.15
PVT1-203ENST00000513868 AFF2P51816 1311 aa15.98■□□□□ 0.15
PVT1-203ENST00000513868 MEX3CQ5U5Q3 659 aaKnown RBP15.97■□□□□ 0.15
PVT1-203ENST00000513868 SUCLG2Q96I99 432 aa15.97■□□□□ 0.15
PVT1-203ENST00000513868 BTAF1O14981 1849 aa15.97■□□□□ 0.15
PVT1-203ENST00000513868 ATRNO75882 1429 aa15.96■□□□□ 0.15
PVT1-203ENST00000513868 APBB1O00213 710 aa15.96■□□□□ 0.15
PVT1-203ENST00000513868 SRGAP3O43295 1099 aa15.96■□□□□ 0.15
PVT1-203ENST00000513868 KCNQ2O43526 872 aa15.96■□□□□ 0.15
PVT1-203ENST00000513868 SEC24BO95487 1268 aa15.96■□□□□ 0.15
PVT1-203ENST00000513868 OTUD7AQ8TE49 926 aaPredicted RBP15.96■□□□□ 0.15
PVT1-203ENST00000513868 GJD4Q96KN9 370 aaPredicted RBP15.96■□□□□ 0.15
PVT1-203ENST00000513868 NHSQ6T4R5 1651 aa15.96■□□□□ 0.15
PVT1-203ENST00000513868 ATP5J2-PTCD1G3V325 749 aa15.95■□□□□ 0.14
PVT1-203ENST00000513868 BMP2KLQ5H9B9 411 aa15.95■□□□□ 0.14
PVT1-203ENST00000513868 HDAC5Q9UQL6 1122 aa15.95■□□□□ 0.14
PVT1-203ENST00000513868 COL15A1P39059 1388 aa15.94■□□□□ 0.14
PVT1-203ENST00000513868 ONECUT3O60422 494 aaPredicted RBP15.94■□□□□ 0.14
PVT1-203ENST00000513868 CASP7P55210 303 aa15.94■□□□□ 0.14
PVT1-203ENST00000513868 ZBTB3Q9H5J0 574 aa15.94■□□□□ 0.14
PVT1-203ENST00000513868 BICC1Q9H694 974 aaKnown RBP15.94■□□□□ 0.14
PVT1-203ENST00000513868 EPHA10Q5JZY3 1008 aa15.93■□□□□ 0.14
PVT1-203ENST00000513868 LRRCC1Q9C099 1032 aa15.93■□□□□ 0.14
PVT1-203ENST00000513868 ZBTB1Q9Y2K1 713 aa15.93■□□□□ 0.14
PVT1-203ENST00000513868 NOP58Q9Y2X3 529 aaKnown RBP15.93■□□□□ 0.14
PVT1-203ENST00000513868 SALL3Q9BXA9 1300 aa15.93■□□□□ 0.14
PVT1-203ENST00000513868 LOC102724428A0A0B4J2F2 783 aa15.92■□□□□ 0.14
PVT1-203ENST00000513868 SIK1P57059 783 aa15.92■□□□□ 0.14
PVT1-203ENST00000513868 JARID2Q92833 1246 aaPredicted RBP15.92■□□□□ 0.14
PVT1-203ENST00000513868 ZBTB47Q9UFB7 747 aaPredicted RBP15.92■□□□□ 0.14
PVT1-203ENST00000513868 PALLDQ8WX93 1383 aa15.92■□□□□ 0.14
PVT1-203ENST00000513868 BRWD3Q6RI45 1802 aa15.92■□□□□ 0.14
PVT1-203ENST00000513868 H7C1W4 665 aa15.92■□□□□ 0.14
PVT1-203ENST00000513868 RAB11FIP3O75154 756 aa15.92■□□□□ 0.14
PVT1-203ENST00000513868 SURF6O75683 361 aaKnown RBP15.92■□□□□ 0.14
PVT1-203ENST00000513868 GSPT1P15170 499 aaKnown RBP15.92■□□□□ 0.14
PVT1-203ENST00000513868 ITPK1Q13572 414 aa15.92■□□□□ 0.14
PVT1-203ENST00000513868 ISCA1Q9BUE6 129 aa15.92■□□□□ 0.14
PVT1-203ENST00000513868 A0A087WZG4 1122 aa15.91■□□□□ 0.14
PVT1-203ENST00000513868 A0A0G2JS52 829 aa15.91■□□□□ 0.14
PVT1-203ENST00000513868 INTS5Q6P9B9 1019 aaKnown RBP15.91■□□□□ 0.14
PVT1-203ENST00000513868 PTF1AQ7RTS3 328 aa15.91■□□□□ 0.14
PVT1-203ENST00000513868 UBE3BQ7Z3V4 1068 aa15.91■□□□□ 0.14
PVT1-203ENST00000513868 OSBPL3Q9H4L5 887 aa15.91■□□□□ 0.14
PVT1-203ENST00000513868 TRPC5Q9UL62 973 aaPredicted RBP15.91■□□□□ 0.14
PVT1-203ENST00000513868 LY75O60449 1722 aa15.91■□□□□ 0.14
PVT1-203ENST00000513868 MAP3K15Q6ZN16 1313 aa15.9■□□□□ 0.14
PVT1-203ENST00000513868 ATP6V1AP38606 617 aa15.9■□□□□ 0.14
PVT1-203ENST00000513868 MYT1Q01538 1121 aa15.9■□□□□ 0.14
PVT1-203ENST00000513868 TCIRG1Q13488 830 aa15.9■□□□□ 0.14
PVT1-203ENST00000513868 TTC22Q5TAA0 569 aa15.9■□□□□ 0.14
PVT1-203ENST00000513868 CCDC191Q8NCU4 936 aa15.9■□□□□ 0.14
PVT1-203ENST00000513868 SMARCC1Q92922 1105 aaPredicted RBP15.9■□□□□ 0.14
PVT1-203ENST00000513868 CWC25Q9NXE8 425 aaPredicted RBP15.9■□□□□ 0.14
PVT1-203ENST00000513868 ZNF330Q9Y3S2 320 aaPredicted RBP15.9■□□□□ 0.14
PVT1-203ENST00000513868 AK9Q5TCS8 1911 aa15.9■□□□□ 0.14
PVT1-203ENST00000513868 TAF1LQ8IZX4 1826 aa15.9■□□□□ 0.14
PVT1-203ENST00000513868 IL6STP40189 918 aaPredicted RBP15.89■□□□□ 0.13
PVT1-203ENST00000513868 TRIM28Q13263 835 aaKnown RBP15.89■□□□□ 0.13
PVT1-203ENST00000513868 RABL6Q3YEC7 729 aaPredicted RBP15.89■□□□□ 0.13
PVT1-203ENST00000513868 NPM2Q86SE8 214 aaKnown RBP15.89■□□□□ 0.13
PVT1-203ENST00000513868 BCL11AQ9H165 835 aa15.89■□□□□ 0.13
PVT1-203ENST00000513868 MYH3P11055 1940 aa15.89■□□□□ 0.13
PVT1-203ENST00000513868 PDE1AP54750 535 aa15.89■□□□□ 0.13
PVT1-203ENST00000513868 KIF6Q6ZMV9 814 aa15.89■□□□□ 0.13
PVT1-203ENST00000513868 RHPN1Q8TCX5 695 aa15.89■□□□□ 0.13
PVT1-203ENST00000513868 PA2G4Q9UQ80 394 aaKnown RBP15.89■□□□□ 0.13
PVT1-203ENST00000513868 ANP32AP39687 249 aaKnown RBP15.88■□□□□ 0.13
PVT1-203ENST00000513868 CRKLP46109 303 aaKnown RBP15.88■□□□□ 0.13
PVT1-203ENST00000513868 EIF5P55010 431 aaKnown RBP15.88■□□□□ 0.13
PVT1-203ENST00000513868 HLFQ16534 295 aa15.88■□□□□ 0.13
PVT1-203ENST00000513868 FAM182BQ5T319 152 aa15.88■□□□□ 0.13
PVT1-203ENST00000513868 GIGYF2Q6Y7W6 1299 aaKnown RBP15.88■□□□□ 0.13
PVT1-203ENST00000513868 KIF1BPQ96EK5 621 aa15.88■□□□□ 0.13
PVT1-203ENST00000513868 CCDC87Q9NVE4 849 aa15.88■□□□□ 0.13
PVT1-203ENST00000513868 BCORQ6W2J9 1755 aa15.87■□□□□ 0.13
PVT1-203ENST00000513868 RFX5P48382 616 aaPredicted RBP15.87■□□□□ 0.13
PVT1-203ENST00000513868 FOXO4P98177 505 aa15.87■□□□□ 0.13
PVT1-203ENST00000513868 HSP90AB4PQ58FF6 505 aa15.87■□□□□ 0.13
PVT1-203ENST00000513868 IL1RAPL2Q9NP60 686 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms