RNA–Protein interactions for RNA: ENST00000512193.5

NEK1-208, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-208ENST00000512193 ANKRD24Q8TF21 1146 aa9.42□□□□□ -0.9
NEK1-208ENST00000512193 RUFY1Q96T51 708 aa9.42□□□□□ -0.9
NEK1-208ENST00000512193 ACBD3Q9H3P7 528 aa9.42□□□□□ -0.9
NEK1-208ENST00000512193 GOLGA8BA8MQT2 603 aa9.42□□□□□ -0.9
NEK1-208ENST00000512193 MINDY4BA8MYZ0 360 aa9.42□□□□□ -0.9
NEK1-208ENST00000512193 CBFA2T2O43439 604 aa9.42□□□□□ -0.9
NEK1-208ENST00000512193 SLC3A2P08195 630 aaKnown RBP9.42□□□□□ -0.9
NEK1-208ENST00000512193 GPTP24298 496 aa9.42□□□□□ -0.9
NEK1-208ENST00000512193 IFIT5Q13325 482 aaKnown RBP9.42□□□□□ -0.9
NEK1-208ENST00000512193 CHRNA2Q15822 529 aa9.42□□□□□ -0.9
NEK1-208ENST00000512193 ANKRD13DQ6ZTN6 518 aa9.42□□□□□ -0.9
NEK1-208ENST00000512193 AKAP2Q9Y2D5 859 aa9.42□□□□□ -0.9
NEK1-208ENST00000512193 PTPRTO14522 1441 aa9.42□□□□□ -0.9
NEK1-208ENST00000512193 NPATQ14207 1427 aa9.42□□□□□ -0.9
NEK1-208ENST00000512193 POGZQ7Z3K3 1410 aa9.42□□□□□ -0.9
NEK1-208ENST00000512193 SAMD9Q5K651 1589 aa9.41□□□□□ -0.9
NEK1-208ENST00000512193 ZNF213O14771 459 aa9.41□□□□□ -0.9
NEK1-208ENST00000512193 HMGB1P09429 215 aaKnown RBP9.41□□□□□ -0.9
NEK1-208ENST00000512193 MCM5P33992 734 aa9.41□□□□□ -0.9
NEK1-208ENST00000512193 IL13P35225 146 aa9.41□□□□□ -0.9
NEK1-208ENST00000512193 SKIDA1Q1XH10 827 aa9.41□□□□□ -0.9
NEK1-208ENST00000512193 ISM2Q6H9L7 571 aa9.41□□□□□ -0.9
NEK1-208ENST00000512193 KLHL10Q6JEL2 608 aa9.41□□□□□ -0.9
NEK1-208ENST00000512193 XAGE3Q8WTP9 111 aa9.41□□□□□ -0.9
NEK1-208ENST00000512193 LRRC59Q96AG4 307 aaKnown RBP9.41□□□□□ -0.9
NEK1-208ENST00000512193 MAGEC2Q9UBF1 373 aaPredicted RBP9.41□□□□□ -0.9
NEK1-208ENST00000512193 MAP3K19Q56UN5 1328 aa9.41□□□□□ -0.9
NEK1-208ENST00000512193 STARD3NLO95772 234 aa9.41□□□□□ -0.9
NEK1-208ENST00000512193 AK2P54819 239 aa9.41□□□□□ -0.9
NEK1-208ENST00000512193 CWF19L2Q2TBE0 894 aaKnown RBP9.41□□□□□ -0.9
NEK1-208ENST00000512193 UBXN4Q92575 508 aa9.41□□□□□ -0.9
NEK1-208ENST00000512193 PDCL3Q9H2J4 239 aa9.41□□□□□ -0.9
NEK1-208ENST00000512193 DACH1Q9UI36 760 aa9.41□□□□□ -0.9
NEK1-208ENST00000512193 USP16Q9Y5T5 823 aa9.41□□□□□ -0.9
NEK1-208ENST00000512193 GRM8O00222 908 aa9.41□□□□□ -0.9
NEK1-208ENST00000512193 NAPBQ9H115 298 aa9.41□□□□□ -0.9
NEK1-208ENST00000512193 ZNF518AQ6AHZ1 1483 aa9.41□□□□□ -0.9
NEK1-208ENST00000512193 MAGI2Q86UL8 1455 aa9.41□□□□□ -0.9
NEK1-208ENST00000512193 ABCC10Q5T3U5 1492 aa9.4□□□□□ -0.9
NEK1-208ENST00000512193 KRT28Q7Z3Y7 464 aa9.4□□□□□ -0.9
NEK1-208ENST00000512193 DACT1Q9NYF0 836 aa9.4□□□□□ -0.9
NEK1-208ENST00000512193 ORC3Q9UBD5 711 aaPredicted RBP9.4□□□□□ -0.9
NEK1-208ENST00000512193 RIMS2Q9UQ26 1411 aa9.4□□□□□ -0.9
NEK1-208ENST00000512193 BICDL1Q6ZP65 573 aa9.4□□□□□ -0.9
NEK1-208ENST00000512193 ZKSCAN5Q9Y2L8 839 aa9.4□□□□□ -0.9
NEK1-208ENST00000512193 TTC21AQ8NDW8 1320 aa9.4□□□□□ -0.9
NEK1-208ENST00000512193 F13A1P00488 732 aa9.4□□□□□ -0.9
NEK1-208ENST00000512193 IKQ13123 557 aaPredicted RBP9.4□□□□□ -0.9
NEK1-208ENST00000512193 UVSSAQ2YD98 709 aa9.4□□□□□ -0.9
NEK1-208ENST00000512193 KIF18AQ8NI77 898 aa9.4□□□□□ -0.9
NEK1-208ENST00000512193 CDK5RAP3Q96JB5 506 aa9.4□□□□□ -0.9
NEK1-208ENST00000512193 NOL7Q9UMY1 257 aaKnown RBP9.4□□□□□ -0.9
NEK1-208ENST00000512193 WDR7Q9Y4E6 1490 aa9.4□□□□□ -0.91
NEK1-208ENST00000512193 INSRP06213 1382 aa9.4□□□□□ -0.91
NEK1-208ENST00000512193 MSH6P52701 1360 aa9.4□□□□□ -0.91
NEK1-208ENST00000512193 ATP2B2Q01814 1243 aa9.4□□□□□ -0.91
NEK1-208ENST00000512193 DHX8Q14562 1220 aaKnown RBP9.4□□□□□ -0.91
NEK1-208ENST00000512193 CCAR1Q8IX12 1150 aaKnown RBP9.4□□□□□ -0.91
NEK1-208ENST00000512193 CCDC144CPQ8IYA2 1237 aa9.4□□□□□ -0.91
NEK1-208ENST00000512193 EPS15P42566 896 aa9.39□□□□□ -0.91
NEK1-208ENST00000512193 KSR2Q6VAB6 950 aa9.39□□□□□ -0.91
NEK1-208ENST00000512193 IFNL2Q8IZJ0 200 aa9.39□□□□□ -0.91
NEK1-208ENST00000512193 TMOD3Q9NYL9 352 aa9.39□□□□□ -0.91
NEK1-208ENST00000512193 YTHDC2Q9H6S0 1430 aaKnown RBP9.39□□□□□ -0.91
NEK1-208ENST00000512193 TNRQ92752 1358 aa9.39□□□□□ -0.91
NEK1-208ENST00000512193 SOS1Q07889 1333 aaPredicted RBP9.39□□□□□ -0.91
NEK1-208ENST00000512193 CTAGE5O15320 804 aa9.39□□□□□ -0.91
NEK1-208ENST00000512193 URI1O94763 535 aaPredicted RBP9.39□□□□□ -0.91
NEK1-208ENST00000512193 LMBR1LQ6UX01 489 aa9.39□□□□□ -0.91
NEK1-208ENST00000512193 LDHAL6AQ6ZMR3 332 aa9.39□□□□□ -0.91
NEK1-208ENST00000512193 ZNHIT6Q9NWK9 470 aaKnown RBP9.39□□□□□ -0.91
NEK1-208ENST00000512193 TCEAL9Q9UHQ7 104 aa9.39□□□□□ -0.91
NEK1-208ENST00000512193 UHRF1BP1LA0JNW5 1464 aa9.39□□□□□ -0.91
NEK1-208ENST00000512193 CCDC66A2RUB6 948 aa9.39□□□□□ -0.91
NEK1-208ENST00000512193 CHL1O00533 1208 aa9.39□□□□□ -0.91
NEK1-208ENST00000512193 NMIQ13287 307 aaPredicted RBP9.39□□□□□ -0.91
NEK1-208ENST00000512193 CCDC186Q7Z3E2 898 aa9.39□□□□□ -0.91
NEK1-208ENST00000512193 MICU3Q86XE3 530 aa9.39□□□□□ -0.91
NEK1-208ENST00000512193 TRMT2AQ8IZ69 625 aaKnown RBP9.39□□□□□ -0.91
NEK1-208ENST00000512193 AK7Q96M32 723 aa9.39□□□□□ -0.91
NEK1-208ENST00000512193 RBSNQ9H1K0 784 aa9.39□□□□□ -0.91
NEK1-208ENST00000512193 HMG20BQ9P0W2 317 aa9.39□□□□□ -0.91
NEK1-208ENST00000512193 TRMT112Q9UI30 125 aaKnown RBP9.39□□□□□ -0.91
NEK1-208ENST00000512193 SNRPA1P09661 255 aaKnown RBP9.38□□□□□ -0.91
NEK1-208ENST00000512193 IGHMBP2P38935 993 aaKnown RBP9.38□□□□□ -0.91
NEK1-208ENST00000512193 NOLC1Q14978 699 aaKnown RBP eCLIP9.38□□□□□ -0.91
NEK1-208ENST00000512193 IFIT3O14879 490 aaKnown RBP9.38□□□□□ -0.91
NEK1-208ENST00000512193 ALDH1L1O75891 902 aa9.38□□□□□ -0.91
NEK1-208ENST00000512193 SYT1P21579 422 aa9.38□□□□□ -0.91
NEK1-208ENST00000512193 ANO6Q4KMQ2 910 aa9.38□□□□□ -0.91
NEK1-208ENST00000512193 LINS1Q8NG48 757 aa9.38□□□□□ -0.91
NEK1-208ENST00000512193 WASF1Q92558 559 aa9.38□□□□□ -0.91
NEK1-208ENST00000512193 FLT4P35916 1363 aa9.38□□□□□ -0.91
NEK1-208ENST00000512193 CFAP65Q6ZU64 1925 aaKnown RBP9.38□□□□□ -0.91
NEK1-208ENST00000512193 NUTM2BA6NNL0 878 aaPredicted RBP9.38□□□□□ -0.91
NEK1-208ENST00000512193 NUTM2EB1AL46 878 aaPredicted RBP9.38□□□□□ -0.91
NEK1-208ENST00000512193 NUTM2AQ8IVF1 878 aaPredicted RBP9.38□□□□□ -0.91
NEK1-208ENST00000512193 CWC25Q9NXE8 425 aaPredicted RBP9.38□□□□□ -0.91
NEK1-208ENST00000512193 ABCC1P33527 1531 aa9.38□□□□□ -0.91
NEK1-208ENST00000512193 KAT6BQ8WYB5 2073 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms