RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 TTLL6Q8N841 843 aa25.37■■□□□ 1.65
ACTN4-208ENST00000497637 CRBNQ96SW2 442 aa25.37■■□□□ 1.65
ACTN4-208ENST00000497637 CRKLP46109 303 aaKnown RBP25.36■■□□□ 1.65
ACTN4-208ENST00000497637 GAS2L2Q8NHY3 880 aa25.36■■□□□ 1.65
ACTN4-208ENST00000497637 C20orf194Q5TEA3 1177 aa25.35■■□□□ 1.65
ACTN4-208ENST00000497637 THUMPD2Q9BTF0 503 aaKnown RBP25.35■■□□□ 1.65
ACTN4-208ENST00000497637 ABHD8Q96I13 439 aa25.34■■□□□ 1.65
ACTN4-208ENST00000497637 CCDC136Q96JN2 1154 aa25.34■■□□□ 1.65
ACTN4-208ENST00000497637 ZPR1O75312 459 aa25.33■■□□□ 1.65
ACTN4-208ENST00000497637 PDE3AQ14432 1141 aa25.33■■□□□ 1.65
ACTN4-208ENST00000497637 MTHFSDQ2M296 383 aaKnown RBP25.33■■□□□ 1.65
ACTN4-208ENST00000497637 CFAP44Q96MT7 982 aa25.33■■□□□ 1.65
ACTN4-208ENST00000497637 HTATSF1O43719 755 aaKnown RBP25.32■■□□□ 1.64
ACTN4-208ENST00000497637 CABP4P57796 275 aa25.31■■□□□ 1.64
ACTN4-208ENST00000497637 ZNF428Q96B54 188 aa25.31■■□□□ 1.64
ACTN4-208ENST00000497637 WBP1LQ9NX94 342 aa25.31■■□□□ 1.64
ACTN4-208ENST00000497637 COL5A3P25940 1745 aaPredicted RBP25.31■■□□□ 1.64
ACTN4-208ENST00000497637 LBX1P52954 281 aa25.3■■□□□ 1.64
ACTN4-208ENST00000497637 MLLT1Q03111 559 aaPredicted RBP25.3■■□□□ 1.64
ACTN4-208ENST00000497637 NFKBIEO00221 500 aa25.29■■□□□ 1.64
ACTN4-208ENST00000497637 PTCD1O75127 700 aaKnown RBP25.29■■□□□ 1.64
ACTN4-208ENST00000497637 LAS1LQ9Y4W2 734 aaKnown RBP25.29■■□□□ 1.64
ACTN4-208ENST00000497637 DLG5Q8TDM6 1919 aa25.29■■□□□ 1.64
ACTN4-208ENST00000497637 DCTN1Q14203 1278 aa25.28■■□□□ 1.64
ACTN4-208ENST00000497637 ERFEQ4G0M1 354 aa25.28■■□□□ 1.64
ACTN4-208ENST00000497637 MBIPQ9NS73 344 aa25.28■■□□□ 1.64
ACTN4-208ENST00000497637 MYH14Q7Z406 1995 aaKnown RBP25.27■■□□□ 1.64
ACTN4-208ENST00000497637 H0YIN7 160 aa25.27■■□□□ 1.64
ACTN4-208ENST00000497637 VEGFBP49765 207 aa25.27■■□□□ 1.64
ACTN4-208ENST00000497637 CHL1O00533 1208 aa25.26■■□□□ 1.63
ACTN4-208ENST00000497637 ALDH1L2Q3SY69 923 aa25.26■■□□□ 1.63
ACTN4-208ENST00000497637 IQCA1LA6NCM1 817 aa25.25■■□□□ 1.63
ACTN4-208ENST00000497637 TMEM88BA6NKF7 163 aa25.25■■□□□ 1.63
ACTN4-208ENST00000497637 RGS19P49795 217 aa25.25■■□□□ 1.63
ACTN4-208ENST00000497637 USPL1Q5W0Q7 1092 aa25.25■■□□□ 1.63
ACTN4-208ENST00000497637 C2CD5Q86YS7 1000 aa25.25■■□□□ 1.63
ACTN4-208ENST00000497637 RTF1Q92541 710 aaKnown RBP25.25■■□□□ 1.63
ACTN4-208ENST00000497637 PASKQ96RG2 1323 aa25.25■■□□□ 1.63
ACTN4-208ENST00000497637 CANXP27824 592 aaKnown RBP25.24■■□□□ 1.63
ACTN4-208ENST00000497637 PLEKHO1Q53GL0 409 aaPredicted RBP25.24■■□□□ 1.63
ACTN4-208ENST00000497637 INTS5Q6P9B9 1019 aaKnown RBP25.24■■□□□ 1.63
ACTN4-208ENST00000497637 MCM10Q7L590 875 aa25.24■■□□□ 1.63
ACTN4-208ENST00000497637 LDHDQ86WU2 507 aa25.24■■□□□ 1.63
ACTN4-208ENST00000497637 SSH1Q8WYL5 1049 aa25.24■■□□□ 1.63
ACTN4-208ENST00000497637 VAMP4O75379 141 aa25.23■■□□□ 1.63
ACTN4-208ENST00000497637 BRPF1P55201 1214 aaPredicted RBP25.23■■□□□ 1.63
ACTN4-208ENST00000497637 MAP2K1Q02750 393 aaPredicted RBP25.23■■□□□ 1.63
ACTN4-208ENST00000497637 NFIXQ14938 502 aa25.23■■□□□ 1.63
ACTN4-208ENST00000497637 PDZRN3Q9UPQ7 1066 aa25.23■■□□□ 1.63
ACTN4-208ENST00000497637 MS4A1P11836 297 aa25.22■■□□□ 1.63
ACTN4-208ENST00000497637 AMOTQ4VCS5 1084 aa25.22■■□□□ 1.63
ACTN4-208ENST00000497637 SMC4Q9NTJ3 1288 aa25.22■■□□□ 1.63
ACTN4-208ENST00000497637 TIAM2Q8IVF5 1701 aa25.22■■□□□ 1.63
ACTN4-208ENST00000497637 GNAT3A8MTJ3 354 aa25.21■■□□□ 1.63
ACTN4-208ENST00000497637 SERPINB2P05120 415 aa25.21■■□□□ 1.63
ACTN4-208ENST00000497637 ZKSCAN2Q63HK3 967 aa25.21■■□□□ 1.63
ACTN4-208ENST00000497637 FRAT1Q92837 279 aaPredicted RBP25.21■■□□□ 1.63
ACTN4-208ENST00000497637 BCL2L13Q9BXK5 485 aa25.21■■□□□ 1.63
ACTN4-208ENST00000497637 POTEIP0CG38 1075 aa25.2■■□□□ 1.62
ACTN4-208ENST00000497637 POTEJP0CG39 1038 aa25.2■■□□□ 1.62
ACTN4-208ENST00000497637 HSPA8P11142 646 aaKnown RBP25.2■■□□□ 1.62
ACTN4-208ENST00000497637 NARFQ9UHQ1 456 aa25.2■■□□□ 1.62
ACTN4-208ENST00000497637 LTBP3Q9NS15 1303 aa25.19■■□□□ 1.62
ACTN4-208ENST00000497637 ZNF530Q6P9A1 599 aaPredicted RBP25.19■■□□□ 1.62
ACTN4-208ENST00000497637 CCDC85CA6NKD9 419 aa25.18■■□□□ 1.62
ACTN4-208ENST00000497637 DDNO94850 711 aaPredicted RBP25.18■■□□□ 1.62
ACTN4-208ENST00000497637 AAMPQ13685 434 aa25.18■■□□□ 1.62
ACTN4-208ENST00000497637 NFATC2IPQ8NCF5 419 aa25.18■■□□□ 1.62
ACTN4-208ENST00000497637 SOS1Q07889 1333 aaPredicted RBP25.17■■□□□ 1.62
ACTN4-208ENST00000497637 TSPYL6Q8N831 410 aa25.17■■□□□ 1.62
ACTN4-208ENST00000497637 C8orf58Q8NAV2 365 aa25.17■■□□□ 1.62
ACTN4-208ENST00000497637 PANK1Q8TE04 598 aa25.17■■□□□ 1.62
ACTN4-208ENST00000497637 TAOK3Q9H2K8 898 aa25.17■■□□□ 1.62
ACTN4-208ENST00000497637 BABAM1Q9NWV8 329 aa25.17■■□□□ 1.62
ACTN4-208ENST00000497637 IPO8O15397 1037 aaKnown RBP25.16■■□□□ 1.62
ACTN4-208ENST00000497637 TWISTNBQ3B726 338 aaPredicted RBP25.16■■□□□ 1.62
ACTN4-208ENST00000497637 C1orf141Q5JVX7 400 aa25.16■■□□□ 1.62
ACTN4-208ENST00000497637 KIF16BQ96L93 1317 aa25.15■■□□□ 1.62
ACTN4-208ENST00000497637 RASSF10A6NK89 507 aa25.15■■□□□ 1.62
ACTN4-208ENST00000497637 C21orf2O43822 256 aa25.15■■□□□ 1.62
ACTN4-208ENST00000497637 ITGBL1O95965 494 aaPredicted RBP25.15■■□□□ 1.62
ACTN4-208ENST00000497637 DEFB115Q30KQ5 88 aa25.15■■□□□ 1.62
ACTN4-208ENST00000497637 L3MBTL3Q96JM7 780 aaPredicted RBP25.15■■□□□ 1.62
ACTN4-208ENST00000497637 PDE6BP35913 854 aa25.14■■□□□ 1.62
ACTN4-208ENST00000497637 MRPL50Q8N5N7 158 aaKnown RBP25.14■■□□□ 1.62
ACTN4-208ENST00000497637 IL17REQ8NFR9 667 aa25.14■■□□□ 1.62
ACTN4-208ENST00000497637 ZNF622Q969S3 477 aaKnown RBP eCLIP25.14■■□□□ 1.62
ACTN4-208ENST00000497637 TAF1DQ9H5J8 278 aaPredicted RBP25.14■■□□□ 1.62
ACTN4-208ENST00000497637 CCDC88AQ3V6T2 1871 aa25.14■■□□□ 1.61
ACTN4-208ENST00000497637 DZIP1LQ8IYY4 767 aaKnown RBP25.13■■□□□ 1.61
ACTN4-208ENST00000497637 COG6Q9Y2V7 657 aa25.13■■□□□ 1.61
ACTN4-208ENST00000497637 DLEC1Q9Y238 1755 aa25.13■■□□□ 1.61
ACTN4-208ENST00000497637 RLBP1P12271 317 aa25.12■■□□□ 1.61
ACTN4-208ENST00000497637 SOGA3Q5TF21 947 aa25.12■■□□□ 1.61
ACTN4-208ENST00000497637 ATF7IPQ6VMQ6 1270 aa25.12■■□□□ 1.61
ACTN4-208ENST00000497637 BRIP1Q9BX63 1249 aa25.12■■□□□ 1.61
ACTN4-208ENST00000497637 NOB1Q9ULX3 412 aaKnown RBP25.12■■□□□ 1.61
ACTN4-208ENST00000497637 AKAP4Q5JQC9 854 aa25.11■■□□□ 1.61
ACTN4-208ENST00000497637 DNAJC10Q8IXB1 793 aa25.11■■□□□ 1.61
ACTN4-208ENST00000497637 ARHGAP45Q92619 1136 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms