RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 ACSBG1Q96GR2 724 aa20.39■□□□□ 0.86
HLA-A-208ENST00000496081 GRM8O00222 908 aa20.39■□□□□ 0.85
HLA-A-208ENST00000496081 TTLL7Q6ZT98 887 aa20.39■□□□□ 0.85
HLA-A-208ENST00000496081 SSH3Q8TE77 659 aa20.39■□□□□ 0.85
HLA-A-208ENST00000496081 PPP1R42Q7Z4L9 355 aa20.38■□□□□ 0.85
HLA-A-208ENST00000496081 TRPC5Q9UL62 973 aaPredicted RBP20.38■□□□□ 0.85
HLA-A-208ENST00000496081 STARD3NLO95772 234 aa20.37■□□□□ 0.85
HLA-A-208ENST00000496081 NUP188Q5SRE5 1749 aa20.37■□□□□ 0.85
HLA-A-208ENST00000496081 POLA2Q14181 598 aa20.36■□□□□ 0.85
HLA-A-208ENST00000496081 GCKRQ14397 625 aa20.36■□□□□ 0.85
HLA-A-208ENST00000496081 HDAC5Q9UQL6 1122 aa20.36■□□□□ 0.85
HLA-A-208ENST00000496081 EXOC6BQ9Y2D4 811 aa20.36■□□□□ 0.85
HLA-A-208ENST00000496081 ATRNO75882 1429 aa20.36■□□□□ 0.85
HLA-A-208ENST00000496081 APBB1O00213 710 aa20.36■□□□□ 0.85
HLA-A-208ENST00000496081 POTEAQ6S8J7 498 aa20.36■□□□□ 0.85
HLA-A-208ENST00000496081 ZBTB47Q9UFB7 747 aaPredicted RBP20.36■□□□□ 0.85
HLA-A-208ENST00000496081 THSD7AQ9UPZ6 1657 aa20.35■□□□□ 0.85
HLA-A-208ENST00000496081 TJP1Q07157 1748 aa20.35■□□□□ 0.85
HLA-A-208ENST00000496081 A0A0G2JS52 829 aa20.35■□□□□ 0.85
HLA-A-208ENST00000496081 SMARCA5O60264 1052 aaPredicted RBP20.35■□□□□ 0.85
HLA-A-208ENST00000496081 CYP19A1P11511 503 aaPredicted RBP20.35■□□□□ 0.85
HLA-A-208ENST00000496081 MTX1Q13505 466 aa20.35■□□□□ 0.85
HLA-A-208ENST00000496081 AFDNP55196 1824 aaKnown RBP20.35■□□□□ 0.85
HLA-A-208ENST00000496081 SRGAP3O43295 1099 aa20.34■□□□□ 0.85
HLA-A-208ENST00000496081 C16orf71Q8IYS4 520 aaPredicted RBP20.34■□□□□ 0.85
HLA-A-208ENST00000496081 GJD4Q96KN9 370 aaPredicted RBP20.34■□□□□ 0.85
HLA-A-208ENST00000496081 ATP5J2-PTCD1G3V325 749 aa20.34■□□□□ 0.85
HLA-A-208ENST00000496081 MYT1Q01538 1121 aa20.34■□□□□ 0.85
HLA-A-208ENST00000496081 PLEKHM2Q8IWE5 1019 aa20.34■□□□□ 0.85
HLA-A-208ENST00000496081 KAZALD1Q96I82 304 aa20.34■□□□□ 0.85
HLA-A-208ENST00000496081 SUCLG2Q96I99 432 aa20.34■□□□□ 0.85
HLA-A-208ENST00000496081 KCNQ2O43526 872 aa20.33■□□□□ 0.84
HLA-A-208ENST00000496081 ZBTB3Q9H5J0 574 aa20.32■□□□□ 0.84
HLA-A-208ENST00000496081 BMP2KLQ5H9B9 411 aa20.31■□□□□ 0.84
HLA-A-208ENST00000496081 OTUD7AQ8TE49 926 aaPredicted RBP20.31■□□□□ 0.84
HLA-A-208ENST00000496081 LRRCC1Q9C099 1032 aa20.31■□□□□ 0.84
HLA-A-208ENST00000496081 BCL11AQ9H165 835 aa20.31■□□□□ 0.84
HLA-A-208ENST00000496081 ZNF330Q9Y3S2 320 aaPredicted RBP20.31■□□□□ 0.84
HLA-A-208ENST00000496081 SURF6O75683 361 aaKnown RBP20.3■□□□□ 0.84
HLA-A-208ENST00000496081 BICC1Q9H694 974 aaKnown RBP20.3■□□□□ 0.84
HLA-A-208ENST00000496081 SEC24BO95487 1268 aa20.29■□□□□ 0.84
HLA-A-208ENST00000496081 ZBTB1Q9Y2K1 713 aa20.29■□□□□ 0.84
HLA-A-208ENST00000496081 PALLDQ8WX93 1383 aa20.29■□□□□ 0.84
HLA-A-208ENST00000496081 A0A087WZG4 1122 aa20.29■□□□□ 0.84
HLA-A-208ENST00000496081 LOC102724428A0A0B4J2F2 783 aa20.29■□□□□ 0.84
HLA-A-208ENST00000496081 SIK1P57059 783 aa20.29■□□□□ 0.84
HLA-A-208ENST00000496081 RBM6P78332 1123 aaKnown RBP20.29■□□□□ 0.84
HLA-A-208ENST00000496081 NPM2Q86SE8 214 aaKnown RBP20.29■□□□□ 0.84
HLA-A-208ENST00000496081 RAB11FIP3O75154 756 aa20.28■□□□□ 0.84
HLA-A-208ENST00000496081 RXRBP28702 533 aa20.28■□□□□ 0.84
HLA-A-208ENST00000496081 ATP6V1AP38606 617 aa20.28■□□□□ 0.84
HLA-A-208ENST00000496081 CICQ96RK0 1608 aaPredicted RBP20.27■□□□□ 0.84
HLA-A-208ENST00000496081 ONECUT3O60422 494 aaPredicted RBP20.27■□□□□ 0.84
HLA-A-208ENST00000496081 EPHA10Q5JZY3 1008 aa20.27■□□□□ 0.84
HLA-A-208ENST00000496081 KIF6Q6ZMV9 814 aa20.27■□□□□ 0.84
HLA-A-208ENST00000496081 UBE3BQ7Z3V4 1068 aa20.27■□□□□ 0.84
HLA-A-208ENST00000496081 JARID2Q92833 1246 aaPredicted RBP20.27■□□□□ 0.84
HLA-A-208ENST00000496081 SMARCC1Q92922 1105 aaPredicted RBP20.27■□□□□ 0.84
HLA-A-208ENST00000496081 NOP58Q9Y2X3 529 aaKnown RBP20.27■□□□□ 0.84
HLA-A-208ENST00000496081 ANP32AP39687 249 aaKnown RBP20.26■□□□□ 0.83
HLA-A-208ENST00000496081 CASP7P55210 303 aa20.26■□□□□ 0.83
HLA-A-208ENST00000496081 CWC25Q9NXE8 425 aaPredicted RBP20.26■□□□□ 0.83
HLA-A-208ENST00000496081 COL15A1P39059 1388 aa20.26■□□□□ 0.83
HLA-A-208ENST00000496081 H7C1W4 665 aa20.26■□□□□ 0.83
HLA-A-208ENST00000496081 IL6STP40189 918 aaPredicted RBP20.26■□□□□ 0.83
HLA-A-208ENST00000496081 CCDC191Q8NCU4 936 aa20.26■□□□□ 0.83
HLA-A-208ENST00000496081 ISCA1Q9BUE6 129 aa20.26■□□□□ 0.83
HLA-A-208ENST00000496081 MAP3K15Q6ZN16 1313 aa20.25■□□□□ 0.83
HLA-A-208ENST00000496081 GSPT1P15170 499 aaKnown RBP20.25■□□□□ 0.83
HLA-A-208ENST00000496081 TCIRG1Q13488 830 aa20.25■□□□□ 0.83
HLA-A-208ENST00000496081 ITPK1Q13572 414 aa20.25■□□□□ 0.83
HLA-A-208ENST00000496081 TTC22Q5TAA0 569 aa20.25■□□□□ 0.83
HLA-A-208ENST00000496081 SALL3Q9BXA9 1300 aa20.25■□□□□ 0.83
HLA-A-208ENST00000496081 HSP90AB4PQ58FF6 505 aa20.24■□□□□ 0.83
HLA-A-208ENST00000496081 INTS5Q6P9B9 1019 aaKnown RBP20.24■□□□□ 0.83
HLA-A-208ENST00000496081 RHPN1Q8TCX5 695 aa20.24■□□□□ 0.83
HLA-A-208ENST00000496081 PTF1AQ7RTS3 328 aa20.23■□□□□ 0.83
HLA-A-208ENST00000496081 ARXQ96QS3 562 aa20.23■□□□□ 0.83
HLA-A-208ENST00000496081 OSBPL3Q9H4L5 887 aa20.23■□□□□ 0.83
HLA-A-208ENST00000496081 CCDC87Q9NVE4 849 aa20.23■□□□□ 0.83
HLA-A-208ENST00000496081 CRKLP46109 303 aaKnown RBP20.23■□□□□ 0.83
HLA-A-208ENST00000496081 PDE1AP54750 535 aa20.23■□□□□ 0.83
HLA-A-208ENST00000496081 TRIM28Q13263 835 aaKnown RBP20.23■□□□□ 0.83
HLA-A-208ENST00000496081 RABL6Q3YEC7 729 aaPredicted RBP20.23■□□□□ 0.83
HLA-A-208ENST00000496081 FAM182BQ5T319 152 aa20.23■□□□□ 0.83
HLA-A-208ENST00000496081 GIGYF2Q6Y7W6 1299 aaKnown RBP20.23■□□□□ 0.83
HLA-A-208ENST00000496081 SEPT12Q8IYM1 358 aa20.23■□□□□ 0.83
HLA-A-208ENST00000496081 KIF1BPQ96EK5 621 aa20.23■□□□□ 0.83
HLA-A-208ENST00000496081 IL1RAPL2Q9NP60 686 aa20.23■□□□□ 0.83
HLA-A-208ENST00000496081 PA2G4Q9UQ80 394 aaKnown RBP20.23■□□□□ 0.83
HLA-A-208ENST00000496081 RREB1Q92766 1687 aa20.23■□□□□ 0.83
HLA-A-208ENST00000496081 ZNF831Q5JPB2 1677 aa20.22■□□□□ 0.83
HLA-A-208ENST00000496081 NHSQ6T4R5 1651 aa20.21■□□□□ 0.83
HLA-A-208ENST00000496081 EIF5P55010 431 aaKnown RBP20.21■□□□□ 0.83
HLA-A-208ENST00000496081 HLFQ16534 295 aa20.21■□□□□ 0.83
HLA-A-208ENST00000496081 MYH14Q7Z406 1995 aaKnown RBP20.21■□□□□ 0.83
HLA-A-208ENST00000496081 DZIP3Q86Y13 1208 aaKnown RBP20.21■□□□□ 0.83
HLA-A-208ENST00000496081 BTAF1O14981 1849 aa20.2■□□□□ 0.82
HLA-A-208ENST00000496081 COL5A3P25940 1745 aaPredicted RBP20.2■□□□□ 0.82
HLA-A-208ENST00000496081 OS9Q13438 667 aaPredicted RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms