RNA–Protein interactions for RNA: ENST00000489304.5

CD40-206, Transcript of CD40 molecule, humanhuman

TSL 5

Gene CD40, Length 1,733 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-206ENST00000489304 UBTFL1P0CB47 393 aaPredicted RBP22.56■■□□□ 1.2
CD40-206ENST00000489304 ATP6V1AP38606 617 aa22.56■■□□□ 1.2
CD40-206ENST00000489304 CWF19L2Q2TBE0 894 aaKnown RBP22.56■■□□□ 1.2
CD40-206ENST00000489304 LINS1Q8NG48 757 aa22.56■■□□□ 1.2
CD40-206ENST00000489304 SMARCC1Q92922 1105 aaPredicted RBP22.56■■□□□ 1.2
CD40-206ENST00000489304 KRT27Q7Z3Y8 459 aa22.55■■□□□ 1.2
CD40-206ENST00000489304 CHD1LQ86WJ1 897 aa22.55■■□□□ 1.2
CD40-206ENST00000489304 ZBTB1Q9Y2K1 713 aa22.55■■□□□ 1.2
CD40-206ENST00000489304 NHSQ6T4R5 1651 aa22.54■■□□□ 1.2
CD40-206ENST00000489304 MYD88Q99836 296 aa22.54■■□□□ 1.2
CD40-206ENST00000489304 ZNF330Q9Y3S2 320 aaPredicted RBP22.54■■□□□ 1.2
CD40-206ENST00000489304 BRWD3Q6RI45 1802 aa22.54■■□□□ 1.2
CD40-206ENST00000489304 IGKV5-2P06315 115 aa22.54■■□□□ 1.2
CD40-206ENST00000489304 KCNQ4P56696 695 aa22.54■■□□□ 1.2
CD40-206ENST00000489304 ATP8B2P98198 1209 aa22.54■■□□□ 1.2
CD40-206ENST00000489304 METTL22Q9BUU2 404 aaPredicted RBP22.54■■□□□ 1.2
CD40-206ENST00000489304 LRRFIP2Q9Y608 721 aaKnown RBP22.54■■□□□ 1.2
CD40-206ENST00000489304 NUP188Q5SRE5 1749 aa22.54■■□□□ 1.2
CD40-206ENST00000489304 ANKRD45Q5TZF3 282 aa22.52■■□□□ 1.2
CD40-206ENST00000489304 PLBD2Q8NHP8 589 aa22.52■■□□□ 1.2
CD40-206ENST00000489304 AFDNP55196 1824 aaKnown RBP22.52■■□□□ 1.2
CD40-206ENST00000489304 FAM161AQ3B820 660 aa22.51■■□□□ 1.19
CD40-206ENST00000489304 ZBTB3Q9H5J0 574 aa22.51■■□□□ 1.19
CD40-206ENST00000489304 BTAF1O14981 1849 aa22.51■■□□□ 1.19
CD40-206ENST00000489304 NBPF7P0C2Y1 421 aaPredicted RBP22.51■■□□□ 1.19
CD40-206ENST00000489304 NEXNQ0ZGT2 675 aa22.51■■□□□ 1.19
CD40-206ENST00000489304 INTS5Q6P9B9 1019 aaKnown RBP22.51■■□□□ 1.19
CD40-206ENST00000489304 POTEAQ6S8J7 498 aa22.51■■□□□ 1.19
CD40-206ENST00000489304 UTYO14607 1347 aa22.5■■□□□ 1.19
CD40-206ENST00000489304 RXRBP28702 533 aa22.5■■□□□ 1.19
CD40-206ENST00000489304 LNPKQ9C0E8 428 aa22.5■■□□□ 1.19
CD40-206ENST00000489304 CICQ96RK0 1608 aaPredicted RBP22.5■■□□□ 1.19
CD40-206ENST00000489304 SBF2Q86WG5 1849 aa22.49■■□□□ 1.19
CD40-206ENST00000489304 CRKLP46109 303 aaKnown RBP22.49■■□□□ 1.19
CD40-206ENST00000489304 C8orf34Q49A92 452 aa22.49■■□□□ 1.19
CD40-206ENST00000489304 HDAC5Q9UQL6 1122 aa22.49■■□□□ 1.19
CD40-206ENST00000489304 NEURL1BA8MQ27 555 aa22.48■■□□□ 1.19
CD40-206ENST00000489304 ATP5J2-PTCD1G3V325 749 aa22.48■■□□□ 1.19
CD40-206ENST00000489304 LINC00116Q8NCU8 138 aa22.48■■□□□ 1.19
CD40-206ENST00000489304 C9orf78Q9NZ63 289 aaPredicted RBP22.48■■□□□ 1.19
CD40-206ENST00000489304 CCDC87Q9NVE4 849 aa22.48■■□□□ 1.19
CD40-206ENST00000489304 PNMA6EA0A0J9YXQ4 647 aa22.47■■□□□ 1.19
CD40-206ENST00000489304 FAM196AQ6ZSG2 479 aa22.47■■□□□ 1.19
CD40-206ENST00000489304 ARXQ96QS3 562 aa22.47■■□□□ 1.19
CD40-206ENST00000489304 GRM8O00222 908 aa22.46■■□□□ 1.19
CD40-206ENST00000489304 SSH3Q8TE77 659 aa22.46■■□□□ 1.19
CD40-206ENST00000489304 BCL11BQ9C0K0 894 aaPredicted RBP22.46■■□□□ 1.19
CD40-206ENST00000489304 JARID2Q92833 1246 aaPredicted RBP22.45■■□□□ 1.19
CD40-206ENST00000489304 IL6STP40189 918 aaPredicted RBP22.45■■□□□ 1.18
CD40-206ENST00000489304 POLA2Q14181 598 aa22.45■■□□□ 1.18
CD40-206ENST00000489304 GCKRQ14397 625 aa22.45■■□□□ 1.18
CD40-206ENST00000489304 ZNF831Q5JPB2 1677 aa22.44■■□□□ 1.18
CD40-206ENST00000489304 TRIM37O94972 964 aa22.44■■□□□ 1.18
CD40-206ENST00000489304 MTX1Q13505 466 aa22.44■■□□□ 1.18
CD40-206ENST00000489304 EIF5P55010 431 aaKnown RBP22.43■■□□□ 1.18
CD40-206ENST00000489304 HLFQ16534 295 aa22.43■■□□□ 1.18
CD40-206ENST00000489304 KIF6Q6ZMV9 814 aa22.43■■□□□ 1.18
CD40-206ENST00000489304 PPP1R42Q7Z4L9 355 aa22.43■■□□□ 1.18
CD40-206ENST00000489304 TBC1D2BQ9UPU7 963 aa22.43■■□□□ 1.18
CD40-206ENST00000489304 MAP3K15Q6ZN16 1313 aa22.43■■□□□ 1.18
CD40-206ENST00000489304 SUCLG2Q96I99 432 aa22.43■■□□□ 1.18
CD40-206ENST00000489304 CCNL1Q9UK58 526 aaPredicted RBP22.43■■□□□ 1.18
CD40-206ENST00000489304 RREB1Q92766 1687 aa22.42■■□□□ 1.18
CD40-206ENST00000489304 SMIM5Q71RC9 77 aa22.42■■□□□ 1.18
CD40-206ENST00000489304 ZBTB47Q9UFB7 747 aaPredicted RBP22.42■■□□□ 1.18
CD40-206ENST00000489304 COL5A3P25940 1745 aaPredicted RBP22.42■■□□□ 1.18
CD40-206ENST00000489304 DZIP3Q86Y13 1208 aaKnown RBP22.41■■□□□ 1.18
CD40-206ENST00000489304 MYH14Q7Z406 1995 aaKnown RBP22.41■■□□□ 1.18
CD40-206ENST00000489304 KAZALD1Q96I82 304 aa22.4■■□□□ 1.18
CD40-206ENST00000489304 COL15A1P39059 1388 aa22.4■■□□□ 1.18
CD40-206ENST00000489304 TCIRG1Q13488 830 aa22.4■■□□□ 1.18
CD40-206ENST00000489304 ISCA1Q9BUE6 129 aa22.4■■□□□ 1.18
CD40-206ENST00000489304 SRGAP3O43295 1099 aa22.39■■□□□ 1.17
CD40-206ENST00000489304 EXOC6BQ9Y2D4 811 aa22.39■■□□□ 1.17
CD40-206ENST00000489304 GIGYF2Q6Y7W6 1299 aaKnown RBP22.38■■□□□ 1.17
CD40-206ENST00000489304 LY75O60449 1722 aa22.38■■□□□ 1.17
CD40-206ENST00000489304 A0A087WZG4 1122 aa22.37■■□□□ 1.17
CD40-206ENST00000489304 LRRC4BQ9NT99 713 aa22.37■■□□□ 1.17
CD40-206ENST00000489304 CNTNAP4Q9C0A0 1308 aa22.37■■□□□ 1.17
CD40-206ENST00000489304 SMARCA5O60264 1052 aaPredicted RBP22.37■■□□□ 1.17
CD40-206ENST00000489304 CASP7P55210 303 aa22.37■■□□□ 1.17
CD40-206ENST00000489304 EPHA10Q5JZY3 1008 aa22.37■■□□□ 1.17
CD40-206ENST00000489304 PLEKHM2Q8IWE5 1019 aa22.37■■□□□ 1.17
CD40-206ENST00000489304 LRRCC1Q9C099 1032 aa22.37■■□□□ 1.17
CD40-206ENST00000489304 CWC25Q9NXE8 425 aaPredicted RBP22.37■■□□□ 1.17
CD40-206ENST00000489304 ANKRD36CQ5JPF3 1778 aa22.36■■□□□ 1.17
CD40-206ENST00000489304 APBB1O00213 710 aa22.36■■□□□ 1.17
CD40-206ENST00000489304 RAB11FIP3O75154 756 aa22.36■■□□□ 1.17
CD40-206ENST00000489304 BMP2KLQ5H9B9 411 aa22.36■■□□□ 1.17
CD40-206ENST00000489304 RTL5Q5HYW3 569 aaPredicted RBP22.36■■□□□ 1.17
CD40-206ENST00000489304 UBE3BQ7Z3V4 1068 aa22.36■■□□□ 1.17
CD40-206ENST00000489304 NPM2Q86SE8 214 aaKnown RBP22.36■■□□□ 1.17
CD40-206ENST00000489304 BICC1Q9H694 974 aaKnown RBP22.36■■□□□ 1.17
CD40-206ENST00000489304 H7C1W4 665 aa22.35■■□□□ 1.17
CD40-206ENST00000489304 GPTP24298 496 aa22.35■■□□□ 1.17
CD40-206ENST00000489304 CCDC191Q8NCU4 936 aa22.35■■□□□ 1.17
CD40-206ENST00000489304 NOP58Q9Y2X3 529 aaKnown RBP22.35■■□□□ 1.17
CD40-206ENST00000489304 ERVV-1B6SEH8 477 aa22.34■■□□□ 1.17
CD40-206ENST00000489304 CAMTA2O94983 1202 aa22.34■■□□□ 1.17
CD40-206ENST00000489304 C16orf71Q8IYS4 520 aaPredicted RBP22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms