RNA–Protein interactions for RNA: ENST00000488733.1

ATP1A1-208, Transcript of ATPase Na+/K+ transporting subunit alpha 1, humanhuman

TSL 2

Gene ATP1A1, Length 1,728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1-208ENST00000488733 PNMA6EA0A0J9YXQ4 647 aa25■■□□□ 1.59
ATP1A1-208ENST00000488733 UTYO14607 1347 aa25■■□□□ 1.59
ATP1A1-208ENST00000488733 DNAJC10Q8IXB1 793 aa25■■□□□ 1.59
ATP1A1-208ENST00000488733 PIP4K2AP48426 406 aaPredicted RBP24.99■■□□□ 1.59
ATP1A1-208ENST00000488733 SMARCC1Q92922 1105 aaPredicted RBP24.99■■□□□ 1.59
ATP1A1-208ENST00000488733 IPO9Q96P70 1041 aaKnown RBP24.99■■□□□ 1.59
ATP1A1-208ENST00000488733 SLC4A9Q96Q91 983 aa24.99■■□□□ 1.59
ATP1A1-208ENST00000488733 PALLDQ8WX93 1383 aa24.99■■□□□ 1.59
ATP1A1-208ENST00000488733 GRM8O00222 908 aa24.98■■□□□ 1.59
ATP1A1-208ENST00000488733 POLA2Q14181 598 aa24.98■■□□□ 1.59
ATP1A1-208ENST00000488733 CWF19L2Q2TBE0 894 aaKnown RBP24.98■■□□□ 1.59
ATP1A1-208ENST00000488733 PLBD2Q8NHP8 589 aa24.98■■□□□ 1.59
ATP1A1-208ENST00000488733 STARD3NLO95772 234 aa24.98■■□□□ 1.59
ATP1A1-208ENST00000488733 PPP1R42Q7Z4L9 355 aa24.98■■□□□ 1.59
ATP1A1-208ENST00000488733 NHSQ6T4R5 1651 aa24.97■■□□□ 1.59
ATP1A1-208ENST00000488733 NBPF26B4DH59 902 aa24.97■■□□□ 1.59
ATP1A1-208ENST00000488733 A1BGP04217 495 aa24.97■■□□□ 1.59
ATP1A1-208ENST00000488733 MTX1Q13505 466 aa24.97■■□□□ 1.59
ATP1A1-208ENST00000488733 NBPF14Q5TI25 921 aa24.97■■□□□ 1.59
ATP1A1-208ENST00000488733 NBPF10Q6P3W6 841 aaKnown RBP24.97■■□□□ 1.59
ATP1A1-208ENST00000488733 PLEKHM2Q8IWE5 1019 aa24.97■■□□□ 1.59
ATP1A1-208ENST00000488733 NBPF15Q8N660 670 aa24.97■■□□□ 1.59
ATP1A1-208ENST00000488733 UPF2Q9HAU5 1272 aaKnown RBP24.97■■□□□ 1.59
ATP1A1-208ENST00000488733 IGKV5-2P06315 115 aa24.96■■□□□ 1.59
ATP1A1-208ENST00000488733 KRT27Q7Z3Y8 459 aa24.96■■□□□ 1.59
ATP1A1-208ENST00000488733 LRRCC1Q9C099 1032 aa24.96■■□□□ 1.59
ATP1A1-208ENST00000488733 NEURL1BA8MQ27 555 aa24.95■■□□□ 1.59
ATP1A1-208ENST00000488733 RAB11FIP3O75154 756 aa24.95■■□□□ 1.59
ATP1A1-208ENST00000488733 LOC102724428A0A0B4J2F2 783 aa24.95■■□□□ 1.58
ATP1A1-208ENST00000488733 SIK1P57059 783 aa24.95■■□□□ 1.58
ATP1A1-208ENST00000488733 PTF1AQ7RTS3 328 aa24.95■■□□□ 1.58
ATP1A1-208ENST00000488733 MYD88Q99836 296 aa24.95■■□□□ 1.58
ATP1A1-208ENST00000488733 EXOC6BQ9Y2D4 811 aa24.95■■□□□ 1.58
ATP1A1-208ENST00000488733 SRGAP3O43295 1099 aa24.94■■□□□ 1.58
ATP1A1-208ENST00000488733 RXRBP28702 533 aa24.94■■□□□ 1.58
ATP1A1-208ENST00000488733 APBB1O00213 710 aa24.93■■□□□ 1.58
ATP1A1-208ENST00000488733 GCKRQ14397 625 aa24.93■■□□□ 1.58
ATP1A1-208ENST00000488733 HSP90AB4PQ58FF6 505 aa24.93■■□□□ 1.58
ATP1A1-208ENST00000488733 DDRGK1Q96HY6 314 aa24.93■■□□□ 1.58
ATP1A1-208ENST00000488733 TJP1Q07157 1748 aa24.93■■□□□ 1.58
ATP1A1-208ENST00000488733 BRWD3Q6RI45 1802 aa24.93■■□□□ 1.58
ATP1A1-208ENST00000488733 CYP19A1P11511 503 aaPredicted RBP24.92■■□□□ 1.58
ATP1A1-208ENST00000488733 RGS17Q9UGC6 210 aaPredicted RBP24.92■■□□□ 1.58
ATP1A1-208ENST00000488733 ARFGEF2Q9Y6D5 1785 aa24.92■■□□□ 1.58
ATP1A1-208ENST00000488733 SMARCA5O60264 1052 aaPredicted RBP24.92■■□□□ 1.58
ATP1A1-208ENST00000488733 SEC24BO95487 1268 aa24.92■■□□□ 1.58
ATP1A1-208ENST00000488733 ATP6V1AP38606 617 aa24.92■■□□□ 1.58
ATP1A1-208ENST00000488733 C16orf71Q8IYS4 520 aaPredicted RBP24.92■■□□□ 1.58
ATP1A1-208ENST00000488733 FAM196AQ6ZSG2 479 aa24.91■■□□□ 1.58
ATP1A1-208ENST00000488733 BTAF1O14981 1849 aa24.9■■□□□ 1.58
ATP1A1-208ENST00000488733 OSBPL3Q9H4L5 887 aa24.9■■□□□ 1.58
ATP1A1-208ENST00000488733 CICQ96RK0 1608 aaPredicted RBP24.9■■□□□ 1.58
ATP1A1-208ENST00000488733 SBF2Q86WG5 1849 aa24.89■■□□□ 1.58
ATP1A1-208ENST00000488733 SURF6O75683 361 aaKnown RBP24.89■■□□□ 1.58
ATP1A1-208ENST00000488733 TTC22Q5TAA0 569 aa24.89■■□□□ 1.58
ATP1A1-208ENST00000488733 EIF5BO60841 1220 aaKnown RBP24.89■■□□□ 1.57
ATP1A1-208ENST00000488733 NOP58Q9Y2X3 529 aaKnown RBP24.89■■□□□ 1.57
ATP1A1-208ENST00000488733 COL15A1P39059 1388 aa24.87■■□□□ 1.57
ATP1A1-208ENST00000488733 MSH5O43196 834 aa24.87■■□□□ 1.57
ATP1A1-208ENST00000488733 ITPK1Q13572 414 aa24.87■■□□□ 1.57
ATP1A1-208ENST00000488733 SUCLG2Q96I99 432 aa24.87■■□□□ 1.57
ATP1A1-208ENST00000488733 BCL11BQ9C0K0 894 aaPredicted RBP24.87■■□□□ 1.57
ATP1A1-208ENST00000488733 POTEAQ6S8J7 498 aa24.86■■□□□ 1.57
ATP1A1-208ENST00000488733 TTLL7Q6ZT98 887 aa24.86■■□□□ 1.57
ATP1A1-208ENST00000488733 KIF1BPQ96EK5 621 aa24.86■■□□□ 1.57
ATP1A1-208ENST00000488733 ZBTB1Q9Y2K1 713 aa24.86■■□□□ 1.57
ATP1A1-208ENST00000488733 ZNF831Q5JPB2 1677 aa24.86■■□□□ 1.57
ATP1A1-208ENST00000488733 OTUD7AQ8TE49 926 aaPredicted RBP24.85■■□□□ 1.57
ATP1A1-208ENST00000488733 KAZALD1Q96I82 304 aa24.85■■□□□ 1.57
ATP1A1-208ENST00000488733 ZNF330Q9Y3S2 320 aaPredicted RBP24.85■■□□□ 1.57
ATP1A1-208ENST00000488733 AFDNP55196 1824 aaKnown RBP24.85■■□□□ 1.57
ATP1A1-208ENST00000488733 NUP188Q5SRE5 1749 aa24.85■■□□□ 1.57
ATP1A1-208ENST00000488733 GSPT1P15170 499 aaKnown RBP24.84■■□□□ 1.57
ATP1A1-208ENST00000488733 PDE1AP54750 535 aa24.84■■□□□ 1.57
ATP1A1-208ENST00000488733 BICC1Q9H694 974 aaKnown RBP24.84■■□□□ 1.57
ATP1A1-208ENST00000488733 CDC45O75419 566 aa24.83■■□□□ 1.57
ATP1A1-208ENST00000488733 ERC1Q8IUD2 1116 aa24.83■■□□□ 1.57
ATP1A1-208ENST00000488733 RHPN1Q8TCX5 695 aa24.83■■□□□ 1.57
ATP1A1-208ENST00000488733 BCL11AQ9H165 835 aa24.83■■□□□ 1.57
ATP1A1-208ENST00000488733 CCDC87Q9NVE4 849 aa24.83■■□□□ 1.57
ATP1A1-208ENST00000488733 SALL3Q9BXA9 1300 aa24.83■■□□□ 1.57
ATP1A1-208ENST00000488733 CRKLP46109 303 aaKnown RBP24.83■■□□□ 1.57
ATP1A1-208ENST00000488733 TBC1D32Q96NH3 1257 aa24.83■■□□□ 1.57
ATP1A1-208ENST00000488733 A0A087WZG4 1122 aa24.82■■□□□ 1.56
ATP1A1-208ENST00000488733 ATP5J2-PTCD1G3V325 749 aa24.82■■□□□ 1.56
ATP1A1-208ENST00000488733 INTS5Q6P9B9 1019 aaKnown RBP24.82■■□□□ 1.56
ATP1A1-208ENST00000488733 KIF6Q6ZMV9 814 aa24.82■■□□□ 1.56
ATP1A1-208ENST00000488733 CCDC191Q8NCU4 936 aa24.82■■□□□ 1.56
ATP1A1-208ENST00000488733 CWC25Q9NXE8 425 aaPredicted RBP24.82■■□□□ 1.56
ATP1A1-208ENST00000488733 STAP2Q9UGK3 403 aa24.82■■□□□ 1.56
ATP1A1-208ENST00000488733 MX1P20591 662 aa24.81■■□□□ 1.56
ATP1A1-208ENST00000488733 IL6STP40189 918 aaPredicted RBP24.81■■□□□ 1.56
ATP1A1-208ENST00000488733 AOX1Q06278 1338 aa24.81■■□□□ 1.56
ATP1A1-208ENST00000488733 H7C1W4 665 aa24.8■■□□□ 1.56
ATP1A1-208ENST00000488733 OS9Q13438 667 aaPredicted RBP24.8■■□□□ 1.56
ATP1A1-208ENST00000488733 ZBTB3Q9H5J0 574 aa24.8■■□□□ 1.56
ATP1A1-208ENST00000488733 COL5A3P25940 1745 aaPredicted RBP24.8■■□□□ 1.56
ATP1A1-208ENST00000488733 RREB1Q92766 1687 aa24.79■■□□□ 1.56
ATP1A1-208ENST00000488733 EP400Q96L91 3159 aa24.79■■□□□ 1.56
ATP1A1-208ENST00000488733 TRIM37O94972 964 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms