RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 GNAI2P04899 355 aa15.24■□□□□ 0.03
PRPF39-203ENST00000477626 LINS1Q8NG48 757 aa15.24■□□□□ 0.03
PRPF39-203ENST00000477626 CYP19A1P11511 503 aaPredicted RBP15.24■□□□□ 0.03
PRPF39-203ENST00000477626 RFX5P48382 616 aaPredicted RBP15.23■□□□□ 0.03
PRPF39-203ENST00000477626 LRRFIP2Q9Y608 721 aaKnown RBP15.23■□□□□ 0.03
PRPF39-203ENST00000477626 QSER1Q2KHR3 1735 aa15.23■□□□□ 0.03
PRPF39-203ENST00000477626 GNAI3P08754 354 aa15.23■□□□□ 0.03
PRPF39-203ENST00000477626 XAGE3Q8WTP9 111 aa15.23■□□□□ 0.03
PRPF39-203ENST00000477626 NUTM2BA6NNL0 878 aaPredicted RBP15.23■□□□□ 0.03
PRPF39-203ENST00000477626 NUTM2EB1AL46 878 aaPredicted RBP15.23■□□□□ 0.03
PRPF39-203ENST00000477626 ADAMTS2O95450 1211 aa15.23■□□□□ 0.03
PRPF39-203ENST00000477626 BMP2KLQ5H9B9 411 aa15.23■□□□□ 0.03
PRPF39-203ENST00000477626 NUTM2AQ8IVF1 878 aaPredicted RBP15.23■□□□□ 0.03
PRPF39-203ENST00000477626 SRCIN1Q9C0H9 1055 aa15.23■□□□□ 0.03
PRPF39-203ENST00000477626 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.23■□□□□ 0.03
PRPF39-203ENST00000477626 SPEF2Q9C093 1822 aa15.23■□□□□ 0.03
PRPF39-203ENST00000477626 PLBD2Q8NHP8 589 aa15.22■□□□□ 0.03
PRPF39-203ENST00000477626 NRXN2Q9P2S2 1712 aa15.21■□□□□ 0.03
PRPF39-203ENST00000477626 GCKRQ14397 625 aa15.21■□□□□ 0.03
PRPF39-203ENST00000477626 CWF19L2Q2TBE0 894 aaKnown RBP15.21■□□□□ 0.03
PRPF39-203ENST00000477626 COPS6Q7L5N1 327 aa15.21■□□□□ 0.03
PRPF39-203ENST00000477626 DDX54Q8TDD1 881 aaKnown RBP15.21■□□□□ 0.03
PRPF39-203ENST00000477626 INTS5Q6P9B9 1019 aaKnown RBP15.21■□□□□ 0.03
PRPF39-203ENST00000477626 OTUD7AQ8TE49 926 aaPredicted RBP15.21■□□□□ 0.03
PRPF39-203ENST00000477626 ISCA1Q9BUE6 129 aa15.21■□□□□ 0.03
PRPF39-203ENST00000477626 STAP2Q9UGK3 403 aa15.21■□□□□ 0.03
PRPF39-203ENST00000477626 EPHA10Q5JZY3 1008 aa15.2■□□□□ 0.02
PRPF39-203ENST00000477626 AKAP11Q9UKA4 1901 aa15.2■□□□□ 0.02
PRPF39-203ENST00000477626 DOCK2Q92608 1830 aa15.2■□□□□ 0.02
PRPF39-203ENST00000477626 H7C1W4 665 aa15.2■□□□□ 0.02
PRPF39-203ENST00000477626 TTLL7Q6ZT98 887 aa15.2■□□□□ 0.02
PRPF39-203ENST00000477626 SUCLG2Q96I99 432 aa15.2■□□□□ 0.02
PRPF39-203ENST00000477626 TMOD3Q9NYL9 352 aa15.2■□□□□ 0.02
PRPF39-203ENST00000477626 A1BGP04217 495 aa15.19■□□□□ 0.02
PRPF39-203ENST00000477626 FOXO4P98177 505 aa15.19■□□□□ 0.02
PRPF39-203ENST00000477626 TRIM28Q13263 835 aaKnown RBP15.19■□□□□ 0.02
PRPF39-203ENST00000477626 C16orf71Q8IYS4 520 aaPredicted RBP15.19■□□□□ 0.02
PRPF39-203ENST00000477626 EXOC5O00471 708 aa15.19■□□□□ 0.02
PRPF39-203ENST00000477626 SLC4A10Q6U841 1118 aa15.18■□□□□ 0.02
PRPF39-203ENST00000477626 GRM8O00222 908 aa15.18■□□□□ 0.02
PRPF39-203ENST00000477626 PIP4K2AP48426 406 aaPredicted RBP15.18■□□□□ 0.02
PRPF39-203ENST00000477626 TNRC6CQ9HCJ0 1690 aaKnown RBP15.18■□□□□ 0.02
PRPF39-203ENST00000477626 ANKRD13DQ6ZTN6 518 aa15.18■□□□□ 0.02
PRPF39-203ENST00000477626 TTC5Q8N0Z6 440 aa15.18■□□□□ 0.02
PRPF39-203ENST00000477626 RGS3P49796 1198 aa15.17■□□□□ 0.02
PRPF39-203ENST00000477626 PTF1AQ7RTS3 328 aa15.17■□□□□ 0.02
PRPF39-203ENST00000477626 LNPKQ9C0E8 428 aa15.17■□□□□ 0.02
PRPF39-203ENST00000477626 USP35Q9P2H5 1018 aa15.17■□□□□ 0.02
PRPF39-203ENST00000477626 ITPK1Q13572 414 aa15.17■□□□□ 0.02
PRPF39-203ENST00000477626 PPP1R42Q7Z4L9 355 aa15.17■□□□□ 0.02
PRPF39-203ENST00000477626 IL17RAQ96F46 866 aa15.17■□□□□ 0.02
PRPF39-203ENST00000477626 AOX1Q06278 1338 aa15.16■□□□□ 0.02
PRPF39-203ENST00000477626 DDB1Q16531 1140 aa15.16■□□□□ 0.02
PRPF39-203ENST00000477626 DNAJC10Q8IXB1 793 aa15.16■□□□□ 0.02
PRPF39-203ENST00000477626 TTC22Q5TAA0 569 aa15.16■□□□□ 0.02
PRPF39-203ENST00000477626 PRIM1P49642 420 aaKnown RBP15.16■□□□□ 0.02
PRPF39-203ENST00000477626 MYH7P12883 1935 aa15.16■□□□□ 0.02
PRPF39-203ENST00000477626 PLA2G12BQ9BX93 195 aa15.15■□□□□ 0.02
PRPF39-203ENST00000477626 LTBP1Q14766 1721 aa15.15■□□□□ 0.02
PRPF39-203ENST00000477626 UBTFL1P0CB47 393 aaPredicted RBP15.15■□□□□ 0.02
PRPF39-203ENST00000477626 PI4K2BQ8TCG2 481 aa15.15■□□□□ 0.02
PRPF39-203ENST00000477626 KIF2CQ99661 725 aa15.15■□□□□ 0.02
PRPF39-203ENST00000477626 MYL6BP14649 208 aa15.14■□□□□ 0.01
PRPF39-203ENST00000477626 EIF5P55010 431 aaKnown RBP15.14■□□□□ 0.01
PRPF39-203ENST00000477626 BICC1Q9H694 974 aaKnown RBP15.14■□□□□ 0.01
PRPF39-203ENST00000477626 TBC1D32Q96NH3 1257 aa15.14■□□□□ 0.01
PRPF39-203ENST00000477626 TEX13AQ9BXU3 409 aaPredicted RBP15.14■□□□□ 0.01
PRPF39-203ENST00000477626 PALLDQ8WX93 1383 aa15.14■□□□□ 0.01
PRPF39-203ENST00000477626 ANKRD45Q5TZF3 282 aa15.14■□□□□ 0.01
PRPF39-203ENST00000477626 LRRC37AA6NMS7 1700 aa15.13■□□□□ 0.01
PRPF39-203ENST00000477626 SMARCA5O60264 1052 aaPredicted RBP15.13■□□□□ 0.01
PRPF39-203ENST00000477626 KCNQ2O43526 872 aa15.13■□□□□ 0.01
PRPF39-203ENST00000477626 C8orf37Q96NL8 207 aa15.13■□□□□ 0.01
PRPF39-203ENST00000477626 MAP3K15Q6ZN16 1313 aa15.12■□□□□ 0.01
PRPF39-203ENST00000477626 RGL2O15211 777 aa15.12■□□□□ 0.01
PRPF39-203ENST00000477626 SASH1O94885 1247 aa15.12■□□□□ 0.01
PRPF39-203ENST00000477626 DDX58O95786 925 aaKnown RBP15.12■□□□□ 0.01
PRPF39-203ENST00000477626 MYO5AQ9Y4I1 1855 aaKnown RBP15.12■□□□□ 0.01
PRPF39-203ENST00000477626 KIAA1551Q9HCM1 1747 aa15.12■□□□□ 0.01
PRPF39-203ENST00000477626 GJD4Q96KN9 370 aaPredicted RBP15.12■□□□□ 0.01
PRPF39-203ENST00000477626 TAF1P21675 1872 aa15.12■□□□□ 0.01
PRPF39-203ENST00000477626 RIC1Q4ADV7 1423 aa15.11■□□□□ 0.01
PRPF39-203ENST00000477626 UBN2Q6ZU65 1347 aa15.11■□□□□ 0.01
PRPF39-203ENST00000477626 RAB11FIP3O75154 756 aa15.11■□□□□ 0.01
PRPF39-203ENST00000477626 PDE1AP54750 535 aa15.11■□□□□ 0.01
PRPF39-203ENST00000477626 MYD88Q99836 296 aa15.11■□□□□ 0.01
PRPF39-203ENST00000477626 ZNF646O15015 1829 aaPredicted RBP15.11■□□□□ 0.01
PRPF39-203ENST00000477626 IL6STP40189 918 aaPredicted RBP15.11■□□□□ 0.01
PRPF39-203ENST00000477626 FAM98CQ17RN3 349 aaKnown RBP15.11■□□□□ 0.01
PRPF39-203ENST00000477626 COPRSQ9NQ92 184 aa15.11■□□□□ 0.01
PRPF39-203ENST00000477626 AFF2P51816 1311 aa15.11■□□□□ 0.01
PRPF39-203ENST00000477626 CDHR2Q9BYE9 1310 aa15.11■□□□□ 0.01
PRPF39-203ENST00000477626 RBM25P49756 843 aaKnown RBP15.1■□□□□ 0.01
PRPF39-203ENST00000477626 PTPN12Q05209 780 aaKnown RBP15.1■□□□□ 0.01
PRPF39-203ENST00000477626 ZNF34Q8IZ26 560 aa15.1■□□□□ 0.01
PRPF39-203ENST00000477626 USP21Q9UK80 565 aa15.1■□□□□ 0.01
PRPF39-203ENST00000477626 EXOC6BQ9Y2D4 811 aa15.1■□□□□ 0.01
PRPF39-203ENST00000477626 ZBTB1Q9Y2K1 713 aa15.1■□□□□ 0.01
PRPF39-203ENST00000477626 ERVV-1B6SEH8 477 aa15.1■□□□□ 0.01
PRPF39-203ENST00000477626 PTCD1O75127 700 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 155.1 ms