RNA–Protein interactions for RNA: ENST00000470668.5

HDAC7-219, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 4,266 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-219ENST00000470668 C8orf58Q8NAV2 365 aa16.55■□□□□ 0.24
HDAC7-219ENST00000470668 FAM135AQ9P2D6 1515 aa16.55■□□□□ 0.24
HDAC7-219ENST00000470668 ADAMTS12P58397 1594 aa16.55■□□□□ 0.24
HDAC7-219ENST00000470668 VPS53Q5VIR6 699 aa16.55■□□□□ 0.24
HDAC7-219ENST00000470668 DCTPP1Q9H773 170 aa16.55■□□□□ 0.24
HDAC7-219ENST00000470668 SHTN1A0MZ66 631 aa16.55■□□□□ 0.24
HDAC7-219ENST00000470668 ZNHIT6Q9NWK9 470 aaKnown RBP16.55■□□□□ 0.24
HDAC7-219ENST00000470668 MTMR7Q9Y216 660 aa16.55■□□□□ 0.24
HDAC7-219ENST00000470668 GPT2Q8TD30 523 aa16.54■□□□□ 0.24
HDAC7-219ENST00000470668 ATAD2Q6PL18 1390 aa16.54■□□□□ 0.24
HDAC7-219ENST00000470668 KIF21AQ7Z4S6 1674 aa16.54■□□□□ 0.24
HDAC7-219ENST00000470668 POLR3DP05423 398 aaPredicted RBP16.54■□□□□ 0.24
HDAC7-219ENST00000470668 GABPB1Q06547 395 aaPredicted RBP16.54■□□□□ 0.24
HDAC7-219ENST00000470668 DNAAF4Q8WXU2 420 aa16.54■□□□□ 0.24
HDAC7-219ENST00000470668 RASSF4Q9H2L5 321 aa16.54■□□□□ 0.24
HDAC7-219ENST00000470668 LMOD1P29536 600 aaPredicted RBP16.54■□□□□ 0.24
HDAC7-219ENST00000470668 AK2P54819 239 aa16.54■□□□□ 0.24
HDAC7-219ENST00000470668 ODF2Q5BJF6 829 aa16.53■□□□□ 0.24
HDAC7-219ENST00000470668 ZRANB1Q9UGI0 708 aa16.53■□□□□ 0.24
HDAC7-219ENST00000470668 TEX14Q8IWB6 1497 aa16.53■□□□□ 0.24
HDAC7-219ENST00000470668 LRRC2Q9BYS8 371 aa16.53■□□□□ 0.24
HDAC7-219ENST00000470668 DACH1Q9UI36 760 aa16.53■□□□□ 0.24
HDAC7-219ENST00000470668 USP19O94966 1318 aa16.53■□□□□ 0.24
HDAC7-219ENST00000470668 GOLGA6L10A6NI86 522 aa16.53■□□□□ 0.24
HDAC7-219ENST00000470668 USHBP1Q8N6Y0 703 aa16.53■□□□□ 0.24
HDAC7-219ENST00000470668 ARHGAP45Q92619 1136 aa16.53■□□□□ 0.24
HDAC7-219ENST00000470668 SRRTQ9BXP5 876 aaKnown RBP16.53■□□□□ 0.24
HDAC7-219ENST00000470668 KDM6BO15054 1643 aa16.52■□□□□ 0.24
HDAC7-219ENST00000470668 LRMPQ12912 555 aa16.52■□□□□ 0.24
HDAC7-219ENST00000470668 TAF7Q15545 349 aaPredicted RBP16.52■□□□□ 0.24
HDAC7-219ENST00000470668 RNF187Q5TA31 235 aaPredicted RBP16.52■□□□□ 0.24
HDAC7-219ENST00000470668 KRBA2Q6ZNG9 492 aa16.52■□□□□ 0.24
HDAC7-219ENST00000470668 MRPL50Q8N5N7 158 aaKnown RBP16.52■□□□□ 0.24
HDAC7-219ENST00000470668 ANAPC15P60006 121 aa16.52■□□□□ 0.24
HDAC7-219ENST00000470668 KRT24Q2M2I5 525 aa16.52■□□□□ 0.24
HDAC7-219ENST00000470668 ZBTB7BO15156 539 aaPredicted RBP16.52■□□□□ 0.23
HDAC7-219ENST00000470668 CAVIN2O95810 425 aa16.52■□□□□ 0.23
HDAC7-219ENST00000470668 USP16Q9Y5T5 823 aa16.52■□□□□ 0.23
HDAC7-219ENST00000470668 FYB1O15117 783 aa16.51■□□□□ 0.23
HDAC7-219ENST00000470668 FKBP4Q02790 459 aaKnown RBP eCLIP16.51■□□□□ 0.23
HDAC7-219ENST00000470668 INTS4Q96HW7 963 aaKnown RBP16.51■□□□□ 0.23
HDAC7-219ENST00000470668 KIAA1328Q86T90 577 aa16.51■□□□□ 0.23
HDAC7-219ENST00000470668 C8orf76Q96K31 380 aa16.51■□□□□ 0.23
HDAC7-219ENST00000470668 MAGEC2Q9UBF1 373 aaPredicted RBP16.51■□□□□ 0.23
HDAC7-219ENST00000470668 JARID2Q92833 1246 aaPredicted RBP16.51■□□□□ 0.23
HDAC7-219ENST00000470668 VAMP4O75379 141 aa16.5■□□□□ 0.23
HDAC7-219ENST00000470668 RAB11FIP4Q86YS3 637 aa16.5■□□□□ 0.23
HDAC7-219ENST00000470668 CCDC150Q8NCX0 1101 aa16.5■□□□□ 0.23
HDAC7-219ENST00000470668 VPS18Q9P253 973 aa16.5■□□□□ 0.23
HDAC7-219ENST00000470668 IL16Q14005 1332 aa16.5■□□□□ 0.23
HDAC7-219ENST00000470668 FLIIQ13045 1269 aa16.5■□□□□ 0.23
HDAC7-219ENST00000470668 PPP1R42Q7Z4L9 355 aa16.5■□□□□ 0.23
HDAC7-219ENST00000470668 RAPGEF4Q8WZA2 1011 aa16.5■□□□□ 0.23
HDAC7-219ENST00000470668 ERO1AQ96HE7 468 aa16.5■□□□□ 0.23
HDAC7-219ENST00000470668 FAM107BQ9H098 131 aa16.5■□□□□ 0.23
HDAC7-219ENST00000470668 PLCH2O75038 1416 aa16.5■□□□□ 0.23
HDAC7-219ENST00000470668 DNA2P51530 1060 aa16.5■□□□□ 0.23
HDAC7-219ENST00000470668 UBASH3AP57075 661 aa16.5■□□□□ 0.23
HDAC7-219ENST00000470668 MICALL1Q8N3F8 863 aa16.5■□□□□ 0.23
HDAC7-219ENST00000470668 NPHP3Q7Z494 1330 aa16.49■□□□□ 0.23
HDAC7-219ENST00000470668 ASXL1Q8IXJ9 1541 aa16.49■□□□□ 0.23
HDAC7-219ENST00000470668 KDM5BQ9UGL1 1544 aa16.49■□□□□ 0.23
HDAC7-219ENST00000470668 NCKAP5LQ9HCH0 1330 aa16.49■□□□□ 0.23
HDAC7-219ENST00000470668 ZMYM4Q5VZL5 1548 aa16.49■□□□□ 0.23
HDAC7-219ENST00000470668 XBP1P17861 261 aa16.49■□□□□ 0.23
HDAC7-219ENST00000470668 CTR9Q6PD62 1173 aa16.49■□□□□ 0.23
HDAC7-219ENST00000470668 CCDC82Q8N4S0 544 aa16.49■□□□□ 0.23
HDAC7-219ENST00000470668 CCDC148Q8NFR7 591 aa16.49■□□□□ 0.23
HDAC7-219ENST00000470668 ZNF692Q9BU19 519 aaPredicted RBP16.49■□□□□ 0.23
HDAC7-219ENST00000470668 BRF1Q92994 677 aa16.48■□□□□ 0.23
HDAC7-219ENST00000470668 CEP85Q6P2H3 762 aa16.48■□□□□ 0.23
HDAC7-219ENST00000470668 ECHDC1Q9NTX5 307 aa16.48■□□□□ 0.23
HDAC7-219ENST00000470668 MYL6BP14649 208 aa16.48■□□□□ 0.23
HDAC7-219ENST00000470668 CERS3Q8IU89 383 aa16.48■□□□□ 0.23
HDAC7-219ENST00000470668 MAP9Q49MG5 647 aa16.48■□□□□ 0.23
HDAC7-219ENST00000470668 TAX1BP1Q86VP1 789 aa16.48■□□□□ 0.23
HDAC7-219ENST00000470668 CNNM3Q8NE01 707 aa16.48■□□□□ 0.23
HDAC7-219ENST00000470668 NUP133Q8WUM0 1156 aa16.48■□□□□ 0.23
HDAC7-219ENST00000470668 IFNKQ9P0W0 207 aa16.48■□□□□ 0.23
HDAC7-219ENST00000470668 ZNF215Q9UL58 517 aaPredicted RBP16.48■□□□□ 0.23
HDAC7-219ENST00000470668 PYCARDQ9ULZ3 195 aa16.48■□□□□ 0.23
HDAC7-219ENST00000470668 TICAM2Q86XR7 235 aa16.47■□□□□ 0.23
HDAC7-219ENST00000470668 EIF5P55010 431 aaKnown RBP16.47■□□□□ 0.23
HDAC7-219ENST00000470668 RHPN1Q8TCX5 695 aa16.47■□□□□ 0.23
HDAC7-219ENST00000470668 BRMS1Q9HCU9 246 aa16.47■□□□□ 0.23
HDAC7-219ENST00000470668 SPATA31E1Q6ZUB1 1445 aa16.47■□□□□ 0.23
HDAC7-219ENST00000470668 CHMLP26374 656 aa16.47■□□□□ 0.23
HDAC7-219ENST00000470668 POLR3AO14802 1390 aaPredicted RBP16.47■□□□□ 0.23
HDAC7-219ENST00000470668 EVCP57679 992 aa16.46■□□□□ 0.23
HDAC7-219ENST00000470668 EVA1CP58658 441 aa16.46■□□□□ 0.23
HDAC7-219ENST00000470668 TTC31Q49AM3 519 aaPredicted RBP16.46■□□□□ 0.23
HDAC7-219ENST00000470668 PUF60Q9UHX1 559 aaKnown RBP16.46■□□□□ 0.23
HDAC7-219ENST00000470668 PIP4K2AP48426 406 aaPredicted RBP16.46■□□□□ 0.23
HDAC7-219ENST00000470668 KARSQ15046 597 aaKnown RBP16.46■□□□□ 0.23
HDAC7-219ENST00000470668 ZNF530Q6P9A1 599 aaPredicted RBP16.46■□□□□ 0.23
HDAC7-219ENST00000470668 TRIM22Q8IYM9 498 aa16.46■□□□□ 0.23
HDAC7-219ENST00000470668 CBX8Q9HC52 389 aa16.46■□□□□ 0.23
HDAC7-219ENST00000470668 RBM8AQ9Y5S9 174 aaKnown RBP16.46■□□□□ 0.23
HDAC7-219ENST00000470668 BRD1O95696 1058 aa16.46■□□□□ 0.23
HDAC7-219ENST00000470668 IVLP07476 585 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms