RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 TBC1D32Q96NH3 1257 aa12.56□□□□□ -0.4
MSH5-213ENST00000468136 ATG3Q9NT62 314 aa12.56□□□□□ -0.4
MSH5-213ENST00000468136 SURF6O75683 361 aaKnown RBP12.55□□□□□ -0.4
MSH5-213ENST00000468136 IGKV5-2P06315 115 aa12.55□□□□□ -0.4
MSH5-213ENST00000468136 NPM2Q86SE8 214 aaKnown RBP12.55□□□□□ -0.4
MSH5-213ENST00000468136 NUTM2BA6NNL0 878 aaPredicted RBP12.54□□□□□ -0.4
MSH5-213ENST00000468136 NUTM2EB1AL46 878 aaPredicted RBP12.54□□□□□ -0.4
MSH5-213ENST00000468136 EPB41L2O43491 1005 aaKnown RBP12.54□□□□□ -0.4
MSH5-213ENST00000468136 PTCD1O75127 700 aaKnown RBP12.54□□□□□ -0.4
MSH5-213ENST00000468136 PDE1AP54750 535 aa12.54□□□□□ -0.4
MSH5-213ENST00000468136 KIF6Q6ZMV9 814 aa12.54□□□□□ -0.4
MSH5-213ENST00000468136 NUTM2AQ8IVF1 878 aaPredicted RBP12.54□□□□□ -0.4
MSH5-213ENST00000468136 GPATCH3Q96I76 525 aa12.54□□□□□ -0.4
MSH5-213ENST00000468136 MYD88Q99836 296 aa12.54□□□□□ -0.4
MSH5-213ENST00000468136 TOGARAM1Q9Y4F4 1720 aa12.54□□□□□ -0.4
MSH5-213ENST00000468136 NBPF26B4DH59 902 aa12.53□□□□□ -0.4
MSH5-213ENST00000468136 MX1P20591 662 aa12.53□□□□□ -0.4
MSH5-213ENST00000468136 HMGB2P26583 209 aaKnown RBP12.53□□□□□ -0.4
MSH5-213ENST00000468136 RABL6Q3YEC7 729 aaPredicted RBP12.53□□□□□ -0.4
MSH5-213ENST00000468136 NBPF14Q5TI25 921 aa12.53□□□□□ -0.4
MSH5-213ENST00000468136 NBPF10Q6P3W6 841 aaKnown RBP12.53□□□□□ -0.4
MSH5-213ENST00000468136 CLASRPQ8N2M8 674 aaKnown RBP12.53□□□□□ -0.4
MSH5-213ENST00000468136 NBPF15Q8N660 670 aa12.53□□□□□ -0.4
MSH5-213ENST00000468136 RHPN1Q8TCX5 695 aa12.53□□□□□ -0.4
MSH5-213ENST00000468136 NGLY1Q96IV0 654 aa12.53□□□□□ -0.4
MSH5-213ENST00000468136 CWC25Q9NXE8 425 aaPredicted RBP12.53□□□□□ -0.4
MSH5-213ENST00000468136 EXOC6BQ9Y2D4 811 aa12.53□□□□□ -0.4
MSH5-213ENST00000468136 TTC41PQ6P2S7 1318 aa12.53□□□□□ -0.4
MSH5-213ENST00000468136 SALL3Q9BXA9 1300 aa12.53□□□□□ -0.4
MSH5-213ENST00000468136 ERVV-1B6SEH8 477 aa12.52□□□□□ -0.41
MSH5-213ENST00000468136 ERC2O15083 957 aa12.52□□□□□ -0.41
MSH5-213ENST00000468136 RGL2O15211 777 aa12.52□□□□□ -0.41
MSH5-213ENST00000468136 IL6STP40189 918 aaPredicted RBP12.52□□□□□ -0.41
MSH5-213ENST00000468136 RBM25P49756 843 aaKnown RBP12.52□□□□□ -0.41
MSH5-213ENST00000468136 G3BP1Q13283 466 aaKnown RBP eCLIP12.52□□□□□ -0.41
MSH5-213ENST00000468136 OS9Q13438 667 aaPredicted RBP12.52□□□□□ -0.41
MSH5-213ENST00000468136 CWF19L2Q2TBE0 894 aaKnown RBP12.52□□□□□ -0.41
MSH5-213ENST00000468136 C22orf23Q9BZE7 217 aa12.52□□□□□ -0.41
MSH5-213ENST00000468136 ASAP1Q9ULH1 1129 aa12.52□□□□□ -0.41
MSH5-213ENST00000468136 CCDC9Q9Y3X0 531 aaKnown RBP12.52□□□□□ -0.41
MSH5-213ENST00000468136 USP42Q9H9J4 1324 aaKnown RBP12.52□□□□□ -0.41
MSH5-213ENST00000468136 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.51□□□□□ -0.41
MSH5-213ENST00000468136 ITGB4P16144 1822 aa12.51□□□□□ -0.41
MSH5-213ENST00000468136 H7C1W4 665 aa12.51□□□□□ -0.41
MSH5-213ENST00000468136 REC8O95072 547 aa12.51□□□□□ -0.41
MSH5-213ENST00000468136 A1BGP04217 495 aa12.51□□□□□ -0.41
MSH5-213ENST00000468136 TCIRG1Q13488 830 aa12.51□□□□□ -0.41
MSH5-213ENST00000468136 TICAM2Q86XR7 235 aa12.51□□□□□ -0.41
MSH5-213ENST00000468136 SUCLG2Q96I99 432 aa12.51□□□□□ -0.41
MSH5-213ENST00000468136 COPRSQ9NQ92 184 aa12.51□□□□□ -0.41
MSH5-213ENST00000468136 FBXO3Q9UK99 471 aa12.51□□□□□ -0.41
MSH5-213ENST00000468136 A0A087WZG4 1122 aa12.5□□□□□ -0.41
MSH5-213ENST00000468136 CYP19A1P11511 503 aaPredicted RBP12.5□□□□□ -0.41
MSH5-213ENST00000468136 HSP90B1P14625 803 aaKnown RBP12.5□□□□□ -0.41
MSH5-213ENST00000468136 GSPT1P15170 499 aaKnown RBP12.5□□□□□ -0.41
MSH5-213ENST00000468136 PRIM1P49642 420 aaKnown RBP12.5□□□□□ -0.41
MSH5-213ENST00000468136 TBC1D9Q6ZT07 1266 aa12.5□□□□□ -0.41
MSH5-213ENST00000468136 POTEDQ86YR6 584 aa12.5□□□□□ -0.41
MSH5-213ENST00000468136 DNAJC10Q8IXB1 793 aa12.5□□□□□ -0.41
MSH5-213ENST00000468136 RBM42Q9BTD8 480 aaKnown RBP12.5□□□□□ -0.41
MSH5-213ENST00000468136 ISCA1Q9BUE6 129 aa12.5□□□□□ -0.41
MSH5-213ENST00000468136 BICC1Q9H694 974 aaKnown RBP12.5□□□□□ -0.41
MSH5-213ENST00000468136 BCL9LQ86UU0 1499 aa12.5□□□□□ -0.41
MSH5-213ENST00000468136 CICQ96RK0 1608 aaPredicted RBP12.5□□□□□ -0.41
MSH5-213ENST00000468136 ARFGEF2Q9Y6D5 1785 aa12.49□□□□□ -0.41
MSH5-213ENST00000468136 MAP3K15Q6ZN16 1313 aa12.49□□□□□ -0.41
MSH5-213ENST00000468136 SMARCA5O60264 1052 aaPredicted RBP12.49□□□□□ -0.41
MSH5-213ENST00000468136 GLRX3O76003 335 aaKnown RBP12.49□□□□□ -0.41
MSH5-213ENST00000468136 GIGYF2Q6Y7W6 1299 aaKnown RBP12.49□□□□□ -0.41
MSH5-213ENST00000468136 C8orf37Q96NL8 207 aa12.49□□□□□ -0.41
MSH5-213ENST00000468136 PLA2G12BQ9BX93 195 aa12.49□□□□□ -0.41
MSH5-213ENST00000468136 SEC24BO95487 1268 aa12.48□□□□□ -0.41
MSH5-213ENST00000468136 SDSP20132 328 aa12.48□□□□□ -0.41
MSH5-213ENST00000468136 MFAP1P55081 439 aaKnown RBP12.48□□□□□ -0.41
MSH5-213ENST00000468136 CASP7P55210 303 aa12.48□□□□□ -0.41
MSH5-213ENST00000468136 C16orf71Q8IYS4 520 aaPredicted RBP12.48□□□□□ -0.41
MSH5-213ENST00000468136 MARCH10Q8NA82 808 aaPredicted RBP12.48□□□□□ -0.41
MSH5-213ENST00000468136 KAZALD1Q96I82 304 aa12.48□□□□□ -0.41
MSH5-213ENST00000468136 AK7Q96M32 723 aa12.48□□□□□ -0.41
MSH5-213ENST00000468136 USP21Q9UK80 565 aa12.48□□□□□ -0.41
MSH5-213ENST00000468136 ZNF831Q5JPB2 1677 aa12.48□□□□□ -0.41
MSH5-213ENST00000468136 APBB1O00213 710 aa12.47□□□□□ -0.41
MSH5-213ENST00000468136 PCCAP05165 728 aaPredicted RBP12.47□□□□□ -0.41
MSH5-213ENST00000468136 IFIT2P09913 472 aaKnown RBP12.47□□□□□ -0.41
MSH5-213ENST00000468136 TTLL7Q6ZT98 887 aa12.47□□□□□ -0.41
MSH5-213ENST00000468136 SYTL4Q96C24 671 aaPredicted RBP12.47□□□□□ -0.41
MSH5-213ENST00000468136 NUP188Q5SRE5 1749 aa12.46□□□□□ -0.41
MSH5-213ENST00000468136 CDHR2Q9BYE9 1310 aa12.46□□□□□ -0.41
MSH5-213ENST00000468136 LOC102724428A0A0B4J2F2 783 aa12.46□□□□□ -0.41
MSH5-213ENST00000468136 HIP1O00291 1037 aa12.46□□□□□ -0.41
MSH5-213ENST00000468136 SIK1P57059 783 aa12.46□□□□□ -0.41
MSH5-213ENST00000468136 UBE3BQ7Z3V4 1068 aa12.46□□□□□ -0.41
MSH5-213ENST00000468136 CNTROBQ8N137 903 aa12.46□□□□□ -0.41
MSH5-213ENST00000468136 ZBTB38Q8NAP3 1195 aaPredicted RBP12.46□□□□□ -0.41
MSH5-213ENST00000468136 GPR108Q9NPR9 543 aa12.46□□□□□ -0.41
MSH5-213ENST00000468136 ECHDC1Q9NTX5 307 aa12.46□□□□□ -0.41
MSH5-213ENST00000468136 DOT1LQ8TEK3 1739 aa12.45□□□□□ -0.42
MSH5-213ENST00000468136 CIAO1O76071 339 aa12.45□□□□□ -0.42
MSH5-213ENST00000468136 MEX3CQ5U5Q3 659 aaKnown RBP12.45□□□□□ -0.42
MSH5-213ENST00000468136 OTUD7AQ8TE49 926 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms