RNA–Protein interactions for RNA: ENST00000467563.3

CHRNA4-203, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,098 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-203ENST00000467563 ARFGEF2Q9Y6D5 1785 aa23.37■■□□□ 1.33
CHRNA4-203ENST00000467563 SMARCA5O60264 1052 aaPredicted RBP23.36■■□□□ 1.33
CHRNA4-203ENST00000467563 POLA2Q14181 598 aa23.36■■□□□ 1.33
CHRNA4-203ENST00000467563 A0A0G2JS52 829 aa23.36■■□□□ 1.33
CHRNA4-203ENST00000467563 STARD3NLO95772 234 aa23.36■■□□□ 1.33
CHRNA4-203ENST00000467563 GCKRQ14397 625 aa23.36■■□□□ 1.33
CHRNA4-203ENST00000467563 C16orf71Q8IYS4 520 aaPredicted RBP23.35■■□□□ 1.33
CHRNA4-203ENST00000467563 SRGAP3O43295 1099 aa23.34■■□□□ 1.33
CHRNA4-203ENST00000467563 KAZALD1Q96I82 304 aa23.34■■□□□ 1.33
CHRNA4-203ENST00000467563 BCL11AQ9H165 835 aa23.34■■□□□ 1.33
CHRNA4-203ENST00000467563 AFF2P51816 1311 aa23.33■■□□□ 1.33
CHRNA4-203ENST00000467563 ATP5J2-PTCD1G3V325 749 aa23.33■■□□□ 1.33
CHRNA4-203ENST00000467563 CYP19A1P11511 503 aaPredicted RBP23.33■■□□□ 1.33
CHRNA4-203ENST00000467563 SUCLG2Q96I99 432 aa23.33■■□□□ 1.33
CHRNA4-203ENST00000467563 ZBTB47Q9UFB7 747 aaPredicted RBP23.33■■□□□ 1.33
CHRNA4-203ENST00000467563 MTX1Q13505 466 aa23.32■■□□□ 1.32
CHRNA4-203ENST00000467563 PLEKHM2Q8IWE5 1019 aa23.32■■□□□ 1.32
CHRNA4-203ENST00000467563 OTUD7AQ8TE49 926 aaPredicted RBP23.32■■□□□ 1.32
CHRNA4-203ENST00000467563 KCNQ2O43526 872 aa23.32■■□□□ 1.32
CHRNA4-203ENST00000467563 MYT1Q01538 1121 aa23.32■■□□□ 1.32
CHRNA4-203ENST00000467563 ZBTB3Q9H5J0 574 aa23.32■■□□□ 1.32
CHRNA4-203ENST00000467563 NUP188Q5SRE5 1749 aa23.32■■□□□ 1.32
CHRNA4-203ENST00000467563 HDAC5Q9UQL6 1122 aa23.31■■□□□ 1.32
CHRNA4-203ENST00000467563 THSD7AQ9UPZ6 1657 aa23.31■■□□□ 1.32
CHRNA4-203ENST00000467563 SEC24BO95487 1268 aa23.31■■□□□ 1.32
CHRNA4-203ENST00000467563 TJP1Q07157 1748 aa23.3■■□□□ 1.32
CHRNA4-203ENST00000467563 NPM2Q86SE8 214 aaKnown RBP23.3■■□□□ 1.32
CHRNA4-203ENST00000467563 GJD4Q96KN9 370 aaPredicted RBP23.3■■□□□ 1.32
CHRNA4-203ENST00000467563 ZNF330Q9Y3S2 320 aaPredicted RBP23.3■■□□□ 1.32
CHRNA4-203ENST00000467563 BMP2KLQ5H9B9 411 aa23.29■■□□□ 1.32
CHRNA4-203ENST00000467563 BICC1Q9H694 974 aaKnown RBP23.29■■□□□ 1.32
CHRNA4-203ENST00000467563 LRRCC1Q9C099 1032 aa23.29■■□□□ 1.32
CHRNA4-203ENST00000467563 JARID2Q92833 1246 aaPredicted RBP23.28■■□□□ 1.32
CHRNA4-203ENST00000467563 AFDNP55196 1824 aaKnown RBP23.28■■□□□ 1.32
CHRNA4-203ENST00000467563 SURF6O75683 361 aaKnown RBP23.28■■□□□ 1.32
CHRNA4-203ENST00000467563 ZBTB1Q9Y2K1 713 aa23.28■■□□□ 1.32
CHRNA4-203ENST00000467563 PALLDQ8WX93 1383 aa23.26■■□□□ 1.31
CHRNA4-203ENST00000467563 LOC102724428A0A0B4J2F2 783 aa23.26■■□□□ 1.31
CHRNA4-203ENST00000467563 SIK1P57059 783 aa23.26■■□□□ 1.31
CHRNA4-203ENST00000467563 ATRNO75882 1429 aa23.26■■□□□ 1.31
CHRNA4-203ENST00000467563 A0A087WZG4 1122 aa23.26■■□□□ 1.31
CHRNA4-203ENST00000467563 ANP32AP39687 249 aaKnown RBP23.26■■□□□ 1.31
CHRNA4-203ENST00000467563 EPHA10Q5JZY3 1008 aa23.26■■□□□ 1.31
CHRNA4-203ENST00000467563 UBE3BQ7Z3V4 1068 aa23.26■■□□□ 1.31
CHRNA4-203ENST00000467563 GSPT1P15170 499 aaKnown RBP23.25■■□□□ 1.31
CHRNA4-203ENST00000467563 CASP7P55210 303 aa23.25■■□□□ 1.31
CHRNA4-203ENST00000467563 ATP6V1AP38606 617 aa23.24■■□□□ 1.31
CHRNA4-203ENST00000467563 RAB11FIP3O75154 756 aa23.24■■□□□ 1.31
CHRNA4-203ENST00000467563 TRPC5Q9UL62 973 aaPredicted RBP23.24■■□□□ 1.31
CHRNA4-203ENST00000467563 NOP58Q9Y2X3 529 aaKnown RBP23.24■■□□□ 1.31
CHRNA4-203ENST00000467563 ITPK1Q13572 414 aa23.23■■□□□ 1.31
CHRNA4-203ENST00000467563 KIF6Q6ZMV9 814 aa23.23■■□□□ 1.31
CHRNA4-203ENST00000467563 PTF1AQ7RTS3 328 aa23.23■■□□□ 1.31
CHRNA4-203ENST00000467563 CWC25Q9NXE8 425 aaPredicted RBP23.23■■□□□ 1.31
CHRNA4-203ENST00000467563 TTC22Q5TAA0 569 aa23.23■■□□□ 1.31
CHRNA4-203ENST00000467563 SMARCC1Q92922 1105 aaPredicted RBP23.23■■□□□ 1.31
CHRNA4-203ENST00000467563 SALL3Q9BXA9 1300 aa23.23■■□□□ 1.31
CHRNA4-203ENST00000467563 COL15A1P39059 1388 aa23.22■■□□□ 1.31
CHRNA4-203ENST00000467563 H7C1W4 665 aa23.22■■□□□ 1.31
CHRNA4-203ENST00000467563 TCIRG1Q13488 830 aa23.22■■□□□ 1.31
CHRNA4-203ENST00000467563 FAM182BQ5T319 152 aa23.22■■□□□ 1.31
CHRNA4-203ENST00000467563 CCDC191Q8NCU4 936 aa23.22■■□□□ 1.31
CHRNA4-203ENST00000467563 ISCA1Q9BUE6 129 aa23.22■■□□□ 1.31
CHRNA4-203ENST00000467563 PA2G4Q9UQ80 394 aaKnown RBP23.22■■□□□ 1.31
CHRNA4-203ENST00000467563 MAP3K15Q6ZN16 1313 aa23.22■■□□□ 1.31
CHRNA4-203ENST00000467563 ONECUT3O60422 494 aaPredicted RBP23.21■■□□□ 1.31
CHRNA4-203ENST00000467563 INTS5Q6P9B9 1019 aaKnown RBP23.21■■□□□ 1.31
CHRNA4-203ENST00000467563 RHPN1Q8TCX5 695 aa23.21■■□□□ 1.31
CHRNA4-203ENST00000467563 ARXQ96QS3 562 aa23.21■■□□□ 1.31
CHRNA4-203ENST00000467563 IL1RAPL2Q9NP60 686 aa23.21■■□□□ 1.31
CHRNA4-203ENST00000467563 IL6STP40189 918 aaPredicted RBP23.21■■□□□ 1.31
CHRNA4-203ENST00000467563 PDE1AP54750 535 aa23.2■■□□□ 1.3
CHRNA4-203ENST00000467563 KIF1BPQ96EK5 621 aa23.2■■□□□ 1.3
CHRNA4-203ENST00000467563 OSBPL3Q9H4L5 887 aa23.2■■□□□ 1.3
CHRNA4-203ENST00000467563 CRKLP46109 303 aaKnown RBP23.2■■□□□ 1.3
CHRNA4-203ENST00000467563 HSP90AB4PQ58FF6 505 aa23.2■■□□□ 1.3
CHRNA4-203ENST00000467563 CICQ96RK0 1608 aaPredicted RBP23.19■■□□□ 1.3
CHRNA4-203ENST00000467563 HLFQ16534 295 aa23.19■■□□□ 1.3
CHRNA4-203ENST00000467563 RABL6Q3YEC7 729 aaPredicted RBP23.19■■□□□ 1.3
CHRNA4-203ENST00000467563 GIGYF2Q6Y7W6 1299 aaKnown RBP23.19■■□□□ 1.3
CHRNA4-203ENST00000467563 CCDC87Q9NVE4 849 aa23.19■■□□□ 1.3
CHRNA4-203ENST00000467563 RTL5Q5HYW3 569 aaPredicted RBP23.18■■□□□ 1.3
CHRNA4-203ENST00000467563 QTRT2Q9H974 415 aaKnown RBP23.18■■□□□ 1.3
CHRNA4-203ENST00000467563 TRIM28Q13263 835 aaKnown RBP23.18■■□□□ 1.3
CHRNA4-203ENST00000467563 EIF5P55010 431 aaKnown RBP23.17■■□□□ 1.3
CHRNA4-203ENST00000467563 OS9Q13438 667 aaPredicted RBP23.17■■□□□ 1.3
CHRNA4-203ENST00000467563 TSHZ3Q63HK5 1081 aa23.17■■□□□ 1.3
CHRNA4-203ENST00000467563 SEPT12Q8IYM1 358 aa23.17■■□□□ 1.3
CHRNA4-203ENST00000467563 MX1P20591 662 aa23.17■■□□□ 1.3
CHRNA4-203ENST00000467563 FOXO4P98177 505 aa23.16■■□□□ 1.3
CHRNA4-203ENST00000467563 DZIP3Q86Y13 1208 aaKnown RBP23.16■■□□□ 1.3
CHRNA4-203ENST00000467563 KLHDC4Q8TBB5 520 aa23.16■■□□□ 1.3
CHRNA4-203ENST00000467563 TBC1D2BQ9UPU7 963 aa23.16■■□□□ 1.3
CHRNA4-203ENST00000467563 MSH5O43196 834 aa23.15■■□□□ 1.3
CHRNA4-203ENST00000467563 IPO9Q96P70 1041 aaKnown RBP23.15■■□□□ 1.3
CHRNA4-203ENST00000467563 RREB1Q92766 1687 aa23.15■■□□□ 1.3
CHRNA4-203ENST00000467563 RFX5P48382 616 aaPredicted RBP23.15■■□□□ 1.3
CHRNA4-203ENST00000467563 STAP2Q9UGK3 403 aa23.15■■□□□ 1.3
CHRNA4-203ENST00000467563 MYH14Q7Z406 1995 aaKnown RBP23.14■■□□□ 1.3
CHRNA4-203ENST00000467563 SDSP20132 328 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms