RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 CYP19A1P11511 503 aaPredicted RBP18.09■□□□□ 0.49
COL5A1-205ENST00000464187 DAXXQ9UER7 740 aaPredicted RBP18.09■□□□□ 0.49
COL5A1-205ENST00000464187 ATP6V1AP38606 617 aa18.08■□□□□ 0.48
COL5A1-205ENST00000464187 TBC1D32Q96NH3 1257 aa18.08■□□□□ 0.48
COL5A1-205ENST00000464187 EP400Q96L91 3159 aa18.08■□□□□ 0.48
COL5A1-205ENST00000464187 ATP10DQ9P241 1426 aa18.08■□□□□ 0.48
COL5A1-205ENST00000464187 KRT27Q7Z3Y8 459 aa18.07■□□□□ 0.48
COL5A1-205ENST00000464187 UPF2Q9HAU5 1272 aaKnown RBP18.07■□□□□ 0.48
COL5A1-205ENST00000464187 USP44Q9H0E7 712 aa18.06■□□□□ 0.48
COL5A1-205ENST00000464187 GNAI3P08754 354 aa18.05■□□□□ 0.48
COL5A1-205ENST00000464187 ANKRD45Q5TZF3 282 aa18.05■□□□□ 0.48
COL5A1-205ENST00000464187 TTLL7Q6ZT98 887 aa18.05■□□□□ 0.48
COL5A1-205ENST00000464187 LINS1Q8NG48 757 aa18.05■□□□□ 0.48
COL5A1-205ENST00000464187 PLBD2Q8NHP8 589 aa18.05■□□□□ 0.48
COL5A1-205ENST00000464187 ZNF330Q9Y3S2 320 aaPredicted RBP18.05■□□□□ 0.48
COL5A1-205ENST00000464187 METTL22Q9BUU2 404 aaPredicted RBP18.05■□□□□ 0.48
COL5A1-205ENST00000464187 ZBTB1Q9Y2K1 713 aa18.05■□□□□ 0.48
COL5A1-205ENST00000464187 ALDH1L1O75891 902 aa18.04■□□□□ 0.48
COL5A1-205ENST00000464187 RXRBP28702 533 aa18.04■□□□□ 0.48
COL5A1-205ENST00000464187 NEXNQ0ZGT2 675 aa18.04■□□□□ 0.48
COL5A1-205ENST00000464187 ITPK1Q13572 414 aa18.04■□□□□ 0.48
COL5A1-205ENST00000464187 CWF19L2Q2TBE0 894 aaKnown RBP18.04■□□□□ 0.48
COL5A1-205ENST00000464187 RTL5Q5HYW3 569 aaPredicted RBP18.04■□□□□ 0.48
COL5A1-205ENST00000464187 RGS17Q9UGC6 210 aaPredicted RBP18.04■□□□□ 0.48
COL5A1-205ENST00000464187 NHSQ6T4R5 1651 aa18.03■□□□□ 0.48
COL5A1-205ENST00000464187 GNAI2P04899 355 aa18.03■□□□□ 0.48
COL5A1-205ENST00000464187 FAM196AQ6ZSG2 479 aa18.03■□□□□ 0.48
COL5A1-205ENST00000464187 MYD88Q99836 296 aa18.03■□□□□ 0.48
COL5A1-205ENST00000464187 TJP1Q07157 1748 aa18.03■□□□□ 0.48
COL5A1-205ENST00000464187 IGKV5-2P06315 115 aa18.02■□□□□ 0.48
COL5A1-205ENST00000464187 UBTFL1P0CB47 393 aaPredicted RBP18.02■□□□□ 0.48
COL5A1-205ENST00000464187 NBPF7P0C2Y1 421 aaPredicted RBP18.02■□□□□ 0.47
COL5A1-205ENST00000464187 CEP85Q6P2H3 762 aa18.02■□□□□ 0.47
COL5A1-205ENST00000464187 RPAP2Q8IXW5 612 aaPredicted RBP18.02■□□□□ 0.47
COL5A1-205ENST00000464187 CRKLP46109 303 aaKnown RBP18.01■□□□□ 0.47
COL5A1-205ENST00000464187 ANKRD44Q8N8A2 993 aa18.01■□□□□ 0.47
COL5A1-205ENST00000464187 BCL11BQ9C0K0 894 aaPredicted RBP18.01■□□□□ 0.47
COL5A1-205ENST00000464187 ZBTB3Q9H5J0 574 aa18.01■□□□□ 0.47
COL5A1-205ENST00000464187 NEURL1BA8MQ27 555 aa18■□□□□ 0.47
COL5A1-205ENST00000464187 IL6STP40189 918 aaPredicted RBP18■□□□□ 0.47
COL5A1-205ENST00000464187 BMP2KLQ5H9B9 411 aa18■□□□□ 0.47
COL5A1-205ENST00000464187 INTS5Q6P9B9 1019 aaKnown RBP18■□□□□ 0.47
COL5A1-205ENST00000464187 CCDC87Q9NVE4 849 aa18■□□□□ 0.47
COL5A1-205ENST00000464187 C9orf78Q9NZ63 289 aaPredicted RBP18■□□□□ 0.47
COL5A1-205ENST00000464187 MFAP1P55081 439 aaKnown RBP18■□□□□ 0.47
COL5A1-205ENST00000464187 DCTPP1Q9H773 170 aa18■□□□□ 0.47
COL5A1-205ENST00000464187 LRRFIP2Q9Y608 721 aaKnown RBP18■□□□□ 0.47
COL5A1-205ENST00000464187 BTAF1O14981 1849 aa17.99■□□□□ 0.47
COL5A1-205ENST00000464187 BRWD3Q6RI45 1802 aa17.99■□□□□ 0.47
COL5A1-205ENST00000464187 KCNQ4P56696 695 aa17.99■□□□□ 0.47
COL5A1-205ENST00000464187 BECN1Q14457 450 aa17.99■□□□□ 0.47
COL5A1-205ENST00000464187 POTEAQ6S8J7 498 aa17.99■□□□□ 0.47
COL5A1-205ENST00000464187 KIF6Q6ZMV9 814 aa17.99■□□□□ 0.47
COL5A1-205ENST00000464187 ARXQ96QS3 562 aa17.99■□□□□ 0.47
COL5A1-205ENST00000464187 ATP5J2-PTCD1G3V325 749 aa17.98■□□□□ 0.47
COL5A1-205ENST00000464187 GRM8O00222 908 aa17.98■□□□□ 0.47
COL5A1-205ENST00000464187 CICQ96RK0 1608 aaPredicted RBP17.98■□□□□ 0.47
COL5A1-205ENST00000464187 EIF5P55010 431 aaKnown RBP17.98■□□□□ 0.47
COL5A1-205ENST00000464187 GCKRQ14397 625 aa17.98■□□□□ 0.47
COL5A1-205ENST00000464187 LINC00116Q8NCU8 138 aa17.98■□□□□ 0.47
COL5A1-205ENST00000464187 C22orf23Q9BZE7 217 aa17.98■□□□□ 0.47
COL5A1-205ENST00000464187 SBF2Q86WG5 1849 aa17.97■□□□□ 0.47
COL5A1-205ENST00000464187 IBTKQ9P2D0 1353 aaPredicted RBP17.97■□□□□ 0.47
COL5A1-205ENST00000464187 TRIM37O94972 964 aa17.97■□□□□ 0.47
COL5A1-205ENST00000464187 CCNL1Q9UK58 526 aaPredicted RBP17.97■□□□□ 0.47
COL5A1-205ENST00000464187 UTYO14607 1347 aa17.96■□□□□ 0.47
COL5A1-205ENST00000464187 MAP3K15Q6ZN16 1313 aa17.96■□□□□ 0.47
COL5A1-205ENST00000464187 ARFGEF2Q9Y6D5 1785 aa17.96■□□□□ 0.47
COL5A1-205ENST00000464187 ZNF831Q5JPB2 1677 aa17.96■□□□□ 0.47
COL5A1-205ENST00000464187 HMMRO75330 724 aa17.95■□□□□ 0.46
COL5A1-205ENST00000464187 DEKP35659 375 aaKnown RBP17.95■□□□□ 0.46
COL5A1-205ENST00000464187 ATP8B2P98198 1209 aa17.95■□□□□ 0.46
COL5A1-205ENST00000464187 DZIP3Q86Y13 1208 aaKnown RBP17.95■□□□□ 0.46
COL5A1-205ENST00000464187 TBC1D2BQ9UPU7 963 aa17.95■□□□□ 0.46
COL5A1-205ENST00000464187 TCIRG1Q13488 830 aa17.94■□□□□ 0.46
COL5A1-205ENST00000464187 NFKBIBQ15653 356 aa17.94■□□□□ 0.46
COL5A1-205ENST00000464187 GIGYF2Q6Y7W6 1299 aaKnown RBP17.94■□□□□ 0.46
COL5A1-205ENST00000464187 HDAC5Q9UQL6 1122 aa17.94■□□□□ 0.46
COL5A1-205ENST00000464187 PNMA6EA0A0J9YXQ4 647 aa17.93■□□□□ 0.46
COL5A1-205ENST00000464187 NUP188Q5SRE5 1749 aa17.93■□□□□ 0.46
COL5A1-205ENST00000464187 TBC1D2Q9BYX2 928 aa17.93■□□□□ 0.46
COL5A1-205ENST00000464187 CNTNAP4Q9C0A0 1308 aa17.93■□□□□ 0.46
COL5A1-205ENST00000464187 A0A087WZG4 1122 aa17.93■□□□□ 0.46
COL5A1-205ENST00000464187 HLFQ16534 295 aa17.93■□□□□ 0.46
COL5A1-205ENST00000464187 PLEKHM2Q8IWE5 1019 aa17.93■□□□□ 0.46
COL5A1-205ENST00000464187 CCDC191Q8NCU4 936 aa17.93■□□□□ 0.46
COL5A1-205ENST00000464187 CWC25Q9NXE8 425 aaPredicted RBP17.93■□□□□ 0.46
COL5A1-205ENST00000464187 ERVV-1B6SEH8 477 aa17.92■□□□□ 0.46
COL5A1-205ENST00000464187 SUCLG2Q96I99 432 aa17.92■□□□□ 0.46
COL5A1-205ENST00000464187 ISCA1Q9BUE6 129 aa17.92■□□□□ 0.46
COL5A1-205ENST00000464187 MYH14Q7Z406 1995 aaKnown RBP17.92■□□□□ 0.46
COL5A1-205ENST00000464187 COL5A3P25940 1745 aaPredicted RBP17.92■□□□□ 0.46
COL5A1-205ENST00000464187 RC3H1Q5TC82 1133 aaKnown RBP17.91■□□□□ 0.46
COL5A1-205ENST00000464187 UBE3BQ7Z3V4 1068 aa17.91■□□□□ 0.46
COL5A1-205ENST00000464187 PPP1R42Q7Z4L9 355 aa17.91■□□□□ 0.46
COL5A1-205ENST00000464187 KAZALD1Q96I82 304 aa17.91■□□□□ 0.46
COL5A1-205ENST00000464187 TUBGCP6Q96RT7 1819 aa17.91■□□□□ 0.46
COL5A1-205ENST00000464187 RREB1Q92766 1687 aa17.91■□□□□ 0.46
COL5A1-205ENST00000464187 GSPT1P15170 499 aaKnown RBP17.91■□□□□ 0.46
COL5A1-205ENST00000464187 TRIM28Q13263 835 aaKnown RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms