RNA–Protein interactions for RNA: ENST00000453727.6

LMO3-210, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 2,403 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-210ENST00000453727 MEIS3Q99687 375 aa10.56□□□□□ -0.72
LMO3-210ENST00000453727 PI4KAP2A4QPH2 592 aa10.55□□□□□ -0.72
LMO3-210ENST00000453727 PI4KAP1Q8N8J0 262 aa10.55□□□□□ -0.72
LMO3-210ENST00000453727 TRIM44Q96DX7 344 aaPredicted RBP10.55□□□□□ -0.72
LMO3-210ENST00000453727 RBM42Q9BTD8 480 aaKnown RBP10.55□□□□□ -0.72
LMO3-210ENST00000453727 HYPKQ9NX55 129 aa10.55□□□□□ -0.72
LMO3-210ENST00000453727 ADCY9O60503 1353 aa10.55□□□□□ -0.72
LMO3-210ENST00000453727 RBM6P78332 1123 aaKnown RBP10.55□□□□□ -0.72
LMO3-210ENST00000453727 MYL6BP14649 208 aa10.54□□□□□ -0.72
LMO3-210ENST00000453727 PIP4K2AP48426 406 aaPredicted RBP10.54□□□□□ -0.72
LMO3-210ENST00000453727 FAM161AQ3B820 660 aa10.54□□□□□ -0.72
LMO3-210ENST00000453727 SIRT2Q8IXJ6 389 aa10.54□□□□□ -0.72
LMO3-210ENST00000453727 DNAAF4Q8WXU2 420 aa10.54□□□□□ -0.72
LMO3-210ENST00000453727 NAP1L2Q9ULW6 460 aaPredicted RBP10.54□□□□□ -0.72
LMO3-210ENST00000453727 ATP10DQ9P241 1426 aa10.53□□□□□ -0.72
LMO3-210ENST00000453727 AIMP1Q12904 312 aaKnown RBP10.53□□□□□ -0.72
LMO3-210ENST00000453727 LRP10Q7Z4F1 713 aa10.53□□□□□ -0.72
LMO3-210ENST00000453727 SMAP1Q8IYB5 467 aaPredicted RBP10.53□□□□□ -0.72
LMO3-210ENST00000453727 BEND3Q5T5X7 828 aa10.53□□□□□ -0.72
LMO3-210ENST00000453727 KSR2Q6VAB6 950 aa10.53□□□□□ -0.72
LMO3-210ENST00000453727 SRCIN1Q9C0H9 1055 aa10.53□□□□□ -0.72
LMO3-210ENST00000453727 MAP3K2Q9Y2U5 619 aa10.53□□□□□ -0.72
LMO3-210ENST00000453727 MRE11P49959 708 aa10.52□□□□□ -0.73
LMO3-210ENST00000453727 PTF1AQ7RTS3 328 aa10.52□□□□□ -0.73
LMO3-210ENST00000453727 DNAJC10Q8IXB1 793 aa10.52□□□□□ -0.73
LMO3-210ENST00000453727 SMC5Q8IY18 1101 aa10.52□□□□□ -0.73
LMO3-210ENST00000453727 XAGE3Q8WTP9 111 aa10.52□□□□□ -0.73
LMO3-210ENST00000453727 SLC4A9Q96Q91 983 aa10.52□□□□□ -0.73
LMO3-210ENST00000453727 TEX13AQ9BXU3 409 aaPredicted RBP10.52□□□□□ -0.73
LMO3-210ENST00000453727 PANK2Q9BZ23 570 aa10.52□□□□□ -0.73
LMO3-210ENST00000453727 PDZRN3Q9UPQ7 1066 aa10.52□□□□□ -0.73
LMO3-210ENST00000453727 A1BGP04217 495 aa10.52□□□□□ -0.73
LMO3-210ENST00000453727 RXRBP28702 533 aa10.52□□□□□ -0.73
LMO3-210ENST00000453727 KIAA1211Q6ZU35 1233 aa10.52□□□□□ -0.73
LMO3-210ENST00000453727 COPS6Q7L5N1 327 aa10.52□□□□□ -0.73
LMO3-210ENST00000453727 KRT27Q7Z3Y8 459 aa10.52□□□□□ -0.73
LMO3-210ENST00000453727 USP44Q9H0E7 712 aa10.52□□□□□ -0.73
LMO3-210ENST00000453727 PALLDQ8WX93 1383 aa10.51□□□□□ -0.73
LMO3-210ENST00000453727 FSD2A1L4K1 749 aa10.51□□□□□ -0.73
LMO3-210ENST00000453727 NBPF26B4DH59 902 aa10.51□□□□□ -0.73
LMO3-210ENST00000453727 BECN1Q14457 450 aa10.51□□□□□ -0.73
LMO3-210ENST00000453727 NBPF14Q5TI25 921 aa10.51□□□□□ -0.73
LMO3-210ENST00000453727 CEP85Q6P2H3 762 aa10.51□□□□□ -0.73
LMO3-210ENST00000453727 NBPF10Q6P3W6 841 aaKnown RBP10.51□□□□□ -0.73
LMO3-210ENST00000453727 NBPF15Q8N660 670 aa10.51□□□□□ -0.73
LMO3-210ENST00000453727 ANKRD44Q8N8A2 993 aa10.51□□□□□ -0.73
LMO3-210ENST00000453727 RGS17Q9UGC6 210 aaPredicted RBP10.51□□□□□ -0.73
LMO3-210ENST00000453727 STARD3NLO95772 234 aa10.5□□□□□ -0.73
LMO3-210ENST00000453727 DDX58O95786 925 aaKnown RBP10.5□□□□□ -0.73
LMO3-210ENST00000453727 GNAI3P08754 354 aa10.5□□□□□ -0.73
LMO3-210ENST00000453727 RPAP2Q8IXW5 612 aaPredicted RBP10.5□□□□□ -0.73
LMO3-210ENST00000453727 ERBB4Q15303 1308 aa10.5□□□□□ -0.73
LMO3-210ENST00000453727 BRWD3Q6RI45 1802 aa10.5□□□□□ -0.73
LMO3-210ENST00000453727 LOC102724428A0A0B4J2F2 783 aa10.5□□□□□ -0.73
LMO3-210ENST00000453727 GNAI2P04899 355 aa10.5□□□□□ -0.73
LMO3-210ENST00000453727 ATP6V1AP38606 617 aa10.5□□□□□ -0.73
LMO3-210ENST00000453727 SIK1P57059 783 aa10.5□□□□□ -0.73
LMO3-210ENST00000453727 SMARCC1Q92922 1105 aaPredicted RBP10.5□□□□□ -0.73
LMO3-210ENST00000453727 RIC3Q7Z5B4 369 aa10.49□□□□□ -0.73
LMO3-210ENST00000453727 ARFGEF2Q9Y6D5 1785 aa10.49□□□□□ -0.73
LMO3-210ENST00000453727 NHSQ6T4R5 1651 aa10.49□□□□□ -0.73
LMO3-210ENST00000453727 CWF19L2Q2TBE0 894 aaKnown RBP10.49□□□□□ -0.73
LMO3-210ENST00000453727 FAM196AQ6ZSG2 479 aa10.49□□□□□ -0.73
LMO3-210ENST00000453727 ANKRD13DQ6ZTN6 518 aa10.49□□□□□ -0.73
LMO3-210ENST00000453727 TJP1Q07157 1748 aa10.48□□□□□ -0.73
LMO3-210ENST00000453727 NBPF7P0C2Y1 421 aaPredicted RBP10.48□□□□□ -0.73
LMO3-210ENST00000453727 UBTFL1P0CB47 393 aaPredicted RBP10.48□□□□□ -0.73
LMO3-210ENST00000453727 CYP19A1P11511 503 aaPredicted RBP10.48□□□□□ -0.73
LMO3-210ENST00000453727 GTF2E1P29083 439 aaPredicted RBP10.48□□□□□ -0.73
LMO3-210ENST00000453727 POTEAQ6S8J7 498 aa10.48□□□□□ -0.73
LMO3-210ENST00000453727 GCC1Q96CN9 775 aa10.48□□□□□ -0.73
LMO3-210ENST00000453727 GZF1Q9H116 711 aaPredicted RBP10.48□□□□□ -0.73
LMO3-210ENST00000453727 FAM13BQ9NYF5 915 aa10.48□□□□□ -0.73
LMO3-210ENST00000453727 ZHX1Q9UKY1 873 aaPredicted RBP10.48□□□□□ -0.73
LMO3-210ENST00000453727 SBF2Q86WG5 1849 aa10.48□□□□□ -0.73
LMO3-210ENST00000453727 BTAF1O14981 1849 aa10.48□□□□□ -0.73
LMO3-210ENST00000453727 ALDH1L1O75891 902 aa10.48□□□□□ -0.73
LMO3-210ENST00000453727 LINS1Q8NG48 757 aa10.48□□□□□ -0.73
LMO3-210ENST00000453727 ZNF330Q9Y3S2 320 aaPredicted RBP10.48□□□□□ -0.73
LMO3-210ENST00000453727 LRRFIP2Q9Y608 721 aaKnown RBP10.48□□□□□ -0.73
LMO3-210ENST00000453727 IGKV5-2P06315 115 aa10.47□□□□□ -0.73
LMO3-210ENST00000453727 NUCB1Q02818 461 aa10.47□□□□□ -0.73
LMO3-210ENST00000453727 TTLL7Q6ZT98 887 aa10.47□□□□□ -0.73
LMO3-210ENST00000453727 MTERF4Q7Z6M4 381 aaKnown RBP10.47□□□□□ -0.73
LMO3-210ENST00000453727 METTL22Q9BUU2 404 aaPredicted RBP10.47□□□□□ -0.73
LMO3-210ENST00000453727 SLKQ9H2G2 1235 aaPredicted RBP10.47□□□□□ -0.73
LMO3-210ENST00000453727 DCTPP1Q9H773 170 aa10.47□□□□□ -0.73
LMO3-210ENST00000453727 NUP188Q5SRE5 1749 aa10.47□□□□□ -0.73
LMO3-210ENST00000453727 ITPK1Q13572 414 aa10.47□□□□□ -0.73
LMO3-210ENST00000453727 C8orf34Q49A92 452 aa10.47□□□□□ -0.73
LMO3-210ENST00000453727 MYD88Q99836 296 aa10.47□□□□□ -0.73
LMO3-210ENST00000453727 AFDNP55196 1824 aaKnown RBP10.47□□□□□ -0.73
LMO3-210ENST00000453727 ANKRD45Q5TZF3 282 aa10.46□□□□□ -0.73
LMO3-210ENST00000453727 PLBD2Q8NHP8 589 aa10.46□□□□□ -0.73
LMO3-210ENST00000453727 ZBTB1Q9Y2K1 713 aa10.46□□□□□ -0.73
LMO3-210ENST00000453727 PNMA6EA0A0J9YXQ4 647 aa10.46□□□□□ -0.74
LMO3-210ENST00000453727 KCNQ4P56696 695 aa10.46□□□□□ -0.74
LMO3-210ENST00000453727 ATP8B2P98198 1209 aa10.46□□□□□ -0.74
LMO3-210ENST00000453727 NEXNQ0ZGT2 675 aa10.46□□□□□ -0.74
LMO3-210ENST00000453727 CHD1LQ86WJ1 897 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms