RNA–Protein interactions for RNA: ENST00000453297.5

MCF2L-219, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 1,819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-219ENST00000453297 SMARCA5O60264 1052 aaPredicted RBP30.52■■■□□ 2.48
MCF2L-219ENST00000453297 NUP188Q5SRE5 1749 aa30.52■■■□□ 2.48
MCF2L-219ENST00000453297 USP21Q9UK80 565 aa30.52■■■□□ 2.48
MCF2L-219ENST00000453297 ANP32AP39687 249 aaKnown RBP30.52■■■□□ 2.48
MCF2L-219ENST00000453297 NPM2Q86SE8 214 aaKnown RBP30.52■■■□□ 2.48
MCF2L-219ENST00000453297 GCKRQ14397 625 aa30.5■■■□□ 2.47
MCF2L-219ENST00000453297 TTLL7Q6ZT98 887 aa30.5■■■□□ 2.47
MCF2L-219ENST00000453297 PLEKHM2Q8IWE5 1019 aa30.5■■■□□ 2.47
MCF2L-219ENST00000453297 C16orf71Q8IYS4 520 aaPredicted RBP30.5■■■□□ 2.47
MCF2L-219ENST00000453297 MTX1Q13505 466 aa30.5■■■□□ 2.47
MCF2L-219ENST00000453297 SLC4A9Q96Q91 983 aa30.5■■■□□ 2.47
MCF2L-219ENST00000453297 SRGAP3O43295 1099 aa30.49■■■□□ 2.47
MCF2L-219ENST00000453297 STARD3NLO95772 234 aa30.49■■■□□ 2.47
MCF2L-219ENST00000453297 ACSBG1Q96GR2 724 aa30.49■■■□□ 2.47
MCF2L-219ENST00000453297 BMP2KLQ5H9B9 411 aa30.48■■■□□ 2.47
MCF2L-219ENST00000453297 SEC24BO95487 1268 aa30.47■■■□□ 2.47
MCF2L-219ENST00000453297 SUCLG2Q96I99 432 aa30.47■■■□□ 2.47
MCF2L-219ENST00000453297 TJP1Q07157 1748 aa30.47■■■□□ 2.47
MCF2L-219ENST00000453297 KAZALD1Q96I82 304 aa30.46■■■□□ 2.47
MCF2L-219ENST00000453297 LRRCC1Q9C099 1032 aa30.46■■■□□ 2.47
MCF2L-219ENST00000453297 MEX3CQ5U5Q3 659 aaKnown RBP30.45■■■□□ 2.47
MCF2L-219ENST00000453297 BCL11AQ9H165 835 aa30.45■■■□□ 2.47
MCF2L-219ENST00000453297 OTUD7AQ8TE49 926 aaPredicted RBP30.45■■■□□ 2.46
MCF2L-219ENST00000453297 CYP19A1P11511 503 aaPredicted RBP30.44■■■□□ 2.46
MCF2L-219ENST00000453297 ATP5J2-PTCD1G3V325 749 aa30.43■■■□□ 2.46
MCF2L-219ENST00000453297 A0A0G2JS52 829 aa30.43■■■□□ 2.46
MCF2L-219ENST00000453297 SURF6O75683 361 aaKnown RBP30.43■■■□□ 2.46
MCF2L-219ENST00000453297 RAB11FIP3O75154 756 aa30.42■■■□□ 2.46
MCF2L-219ENST00000453297 ZBTB3Q9H5J0 574 aa30.42■■■□□ 2.46
MCF2L-219ENST00000453297 THSD7AQ9UPZ6 1657 aa30.41■■■□□ 2.46
MCF2L-219ENST00000453297 BICC1Q9H694 974 aaKnown RBP30.41■■■□□ 2.46
MCF2L-219ENST00000453297 TTC22Q5TAA0 569 aa30.38■■■□□ 2.45
MCF2L-219ENST00000453297 NOP58Q9Y2X3 529 aaKnown RBP30.38■■■□□ 2.45
MCF2L-219ENST00000453297 ZNF330Q9Y3S2 320 aaPredicted RBP30.38■■■□□ 2.45
MCF2L-219ENST00000453297 AFF2P51816 1311 aa30.38■■■□□ 2.45
MCF2L-219ENST00000453297 GSPT1P15170 499 aaKnown RBP30.38■■■□□ 2.45
MCF2L-219ENST00000453297 COL15A1P39059 1388 aa30.37■■■□□ 2.45
MCF2L-219ENST00000453297 A0A087WZG4 1122 aa30.37■■■□□ 2.45
MCF2L-219ENST00000453297 MYT1Q01538 1121 aa30.37■■■□□ 2.45
MCF2L-219ENST00000453297 SALL3Q9BXA9 1300 aa30.37■■■□□ 2.45
MCF2L-219ENST00000453297 KCNQ2O43526 872 aa30.36■■■□□ 2.45
MCF2L-219ENST00000453297 HSP90AB4PQ58FF6 505 aa30.36■■■□□ 2.45
MCF2L-219ENST00000453297 IPO9Q96P70 1041 aaKnown RBP30.36■■■□□ 2.45
MCF2L-219ENST00000453297 OSBPL3Q9H4L5 887 aa30.36■■■□□ 2.45
MCF2L-219ENST00000453297 CASP7P55210 303 aa30.36■■■□□ 2.45
MCF2L-219ENST00000453297 KIF6Q6ZMV9 814 aa30.36■■■□□ 2.45
MCF2L-219ENST00000453297 UBE3BQ7Z3V4 1068 aa30.36■■■□□ 2.45
MCF2L-219ENST00000453297 JARID2Q92833 1246 aaPredicted RBP30.36■■■□□ 2.45
MCF2L-219ENST00000453297 CICQ96RK0 1608 aaPredicted RBP30.35■■■□□ 2.45
MCF2L-219ENST00000453297 EPHA10Q5JZY3 1008 aa30.35■■■□□ 2.45
MCF2L-219ENST00000453297 RHPN1Q8TCX5 695 aa30.35■■■□□ 2.45
MCF2L-219ENST00000453297 GJD4Q96KN9 370 aaPredicted RBP30.35■■■□□ 2.45
MCF2L-219ENST00000453297 CWC25Q9NXE8 425 aaPredicted RBP30.35■■■□□ 2.45
MCF2L-219ENST00000453297 ZBTB1Q9Y2K1 713 aa30.35■■■□□ 2.45
MCF2L-219ENST00000453297 PDE1AP54750 535 aa30.34■■■□□ 2.45
MCF2L-219ENST00000453297 CCDC191Q8NCU4 936 aa30.34■■■□□ 2.45
MCF2L-219ENST00000453297 H7C1W4 665 aa30.33■■■□□ 2.45
MCF2L-219ENST00000453297 MSH5O43196 834 aa30.33■■■□□ 2.45
MCF2L-219ENST00000453297 KIF1BPQ96EK5 621 aa30.33■■■□□ 2.45
MCF2L-219ENST00000453297 LOC102724428A0A0B4J2F2 783 aa30.33■■■□□ 2.45
MCF2L-219ENST00000453297 SIK1P57059 783 aa30.33■■■□□ 2.45
MCF2L-219ENST00000453297 SMARCC1Q92922 1105 aaPredicted RBP30.33■■■□□ 2.45
MCF2L-219ENST00000453297 PALLDQ8WX93 1383 aa30.32■■■□□ 2.44
MCF2L-219ENST00000453297 ATP6V1AP38606 617 aa30.32■■■□□ 2.44
MCF2L-219ENST00000453297 TCIRG1Q13488 830 aa30.32■■■□□ 2.44
MCF2L-219ENST00000453297 ISCA1Q9BUE6 129 aa30.32■■■□□ 2.44
MCF2L-219ENST00000453297 UPF2Q9HAU5 1272 aaKnown RBP30.31■■■□□ 2.44
MCF2L-219ENST00000453297 IL1RAPL2Q9NP60 686 aa30.31■■■□□ 2.44
MCF2L-219ENST00000453297 PA2G4Q9UQ80 394 aaKnown RBP30.31■■■□□ 2.44
MCF2L-219ENST00000453297 MAP3K15Q6ZN16 1313 aa30.31■■■□□ 2.44
MCF2L-219ENST00000453297 ATRNO75882 1429 aa30.31■■■□□ 2.44
MCF2L-219ENST00000453297 IL6STP40189 918 aaPredicted RBP30.3■■■□□ 2.44
MCF2L-219ENST00000453297 RABL6Q3YEC7 729 aaPredicted RBP30.3■■■□□ 2.44
MCF2L-219ENST00000453297 MX1P20591 662 aa30.29■■■□□ 2.44
MCF2L-219ENST00000453297 OS9Q13438 667 aaPredicted RBP30.29■■■□□ 2.44
MCF2L-219ENST00000453297 RREB1Q92766 1687 aa30.29■■■□□ 2.44
MCF2L-219ENST00000453297 STAP2Q9UGK3 403 aa30.29■■■□□ 2.44
MCF2L-219ENST00000453297 TRIM28Q13263 835 aaKnown RBP30.28■■■□□ 2.44
MCF2L-219ENST00000453297 ARXQ96QS3 562 aa30.28■■■□□ 2.44
MCF2L-219ENST00000453297 TRPC5Q9UL62 973 aaPredicted RBP30.28■■■□□ 2.44
MCF2L-219ENST00000453297 CDC45O75419 566 aa30.27■■■□□ 2.44
MCF2L-219ENST00000453297 ITPK1Q13572 414 aa30.27■■■□□ 2.44
MCF2L-219ENST00000453297 INTS5Q6P9B9 1019 aaKnown RBP30.27■■■□□ 2.44
MCF2L-219ENST00000453297 GIGYF2Q6Y7W6 1299 aaKnown RBP30.27■■■□□ 2.44
MCF2L-219ENST00000453297 ZNF831Q5JPB2 1677 aa30.27■■■□□ 2.44
MCF2L-219ENST00000453297 TBC1D9Q6ZT07 1266 aa30.26■■■□□ 2.44
MCF2L-219ENST00000453297 ERC1Q8IUD2 1116 aa30.26■■■□□ 2.44
MCF2L-219ENST00000453297 CCDC87Q9NVE4 849 aa30.26■■■□□ 2.44
MCF2L-219ENST00000453297 TUBGCP6Q96RT7 1819 aa30.26■■■□□ 2.43
MCF2L-219ENST00000453297 SDSP20132 328 aa30.26■■■□□ 2.43
MCF2L-219ENST00000453297 MFAP1P55081 439 aaKnown RBP30.26■■■□□ 2.43
MCF2L-219ENST00000453297 ONECUT3O60422 494 aaPredicted RBP30.25■■■□□ 2.43
MCF2L-219ENST00000453297 TBC1D32Q96NH3 1257 aa30.25■■■□□ 2.43
MCF2L-219ENST00000453297 ANKRD36CQ5JPF3 1778 aa30.25■■■□□ 2.43
MCF2L-219ENST00000453297 CRKLP46109 303 aaKnown RBP30.24■■■□□ 2.43
MCF2L-219ENST00000453297 FOXO4P98177 505 aa30.24■■■□□ 2.43
MCF2L-219ENST00000453297 HLFQ16534 295 aa30.24■■■□□ 2.43
MCF2L-219ENST00000453297 DDRGK1Q96HY6 314 aa30.24■■■□□ 2.43
MCF2L-219ENST00000453297 COL5A3P25940 1745 aaPredicted RBP30.24■■■□□ 2.43
MCF2L-219ENST00000453297 NHSQ6T4R5 1651 aa30.24■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms