RNA–Protein interactions for RNA: ENST00000442956.1

LINC00299-202, long intergenic non-protein coding RNA 299, humanhuman

TSL 2 BASIC

Gene LINC00299, Length 2,342 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299-202ENST00000442956 SMARCA5O60264 1052 aaPredicted RBP18.15■□□□□ 0.5
LINC00299-202ENST00000442956 SLC4A9Q96Q91 983 aa18.15■□□□□ 0.5
LINC00299-202ENST00000442956 SRGAP3O43295 1099 aa18.15■□□□□ 0.5
LINC00299-202ENST00000442956 GCKRQ14397 625 aa18.15■□□□□ 0.5
LINC00299-202ENST00000442956 NPM2Q86SE8 214 aaKnown RBP18.15■□□□□ 0.5
LINC00299-202ENST00000442956 IBTKQ9P2D0 1353 aaPredicted RBP18.14■□□□□ 0.5
LINC00299-202ENST00000442956 POLA2Q14181 598 aa18.14■□□□□ 0.49
LINC00299-202ENST00000442956 C16orf71Q8IYS4 520 aaPredicted RBP18.14■□□□□ 0.49
LINC00299-202ENST00000442956 DOT1LQ8TEK3 1739 aa18.14■□□□□ 0.49
LINC00299-202ENST00000442956 ANP32AP39687 249 aaKnown RBP18.14■□□□□ 0.49
LINC00299-202ENST00000442956 MYT1Q01538 1121 aa18.14■□□□□ 0.49
LINC00299-202ENST00000442956 KAT6BQ8WYB5 2073 aa18.13■□□□□ 0.49
LINC00299-202ENST00000442956 MTX1Q13505 466 aa18.12■□□□□ 0.49
LINC00299-202ENST00000442956 PLEKHM2Q8IWE5 1019 aa18.12■□□□□ 0.49
LINC00299-202ENST00000442956 ATP5J2-PTCD1G3V325 749 aa18.12■□□□□ 0.49
LINC00299-202ENST00000442956 BMP2KLQ5H9B9 411 aa18.12■□□□□ 0.49
LINC00299-202ENST00000442956 SUCLG2Q96I99 432 aa18.12■□□□□ 0.49
LINC00299-202ENST00000442956 ZNF330Q9Y3S2 320 aaPredicted RBP18.12■□□□□ 0.49
LINC00299-202ENST00000442956 CYP19A1P11511 503 aaPredicted RBP18.11■□□□□ 0.49
LINC00299-202ENST00000442956 OTUD7AQ8TE49 926 aaPredicted RBP18.11■□□□□ 0.49
LINC00299-202ENST00000442956 LRRCC1Q9C099 1032 aa18.11■□□□□ 0.49
LINC00299-202ENST00000442956 ZBTB3Q9H5J0 574 aa18.11■□□□□ 0.49
LINC00299-202ENST00000442956 KAZALD1Q96I82 304 aa18.11■□□□□ 0.49
LINC00299-202ENST00000442956 SURF6O75683 361 aaKnown RBP18.1■□□□□ 0.49
LINC00299-202ENST00000442956 SEC24BO95487 1268 aa18.1■□□□□ 0.49
LINC00299-202ENST00000442956 AFF2P51816 1311 aa18.1■□□□□ 0.49
LINC00299-202ENST00000442956 BICC1Q9H694 974 aaKnown RBP18.1■□□□□ 0.49
LINC00299-202ENST00000442956 KCNQ2O43526 872 aa18.09■□□□□ 0.49
LINC00299-202ENST00000442956 ARFGEF2Q9Y6D5 1785 aa18.08■□□□□ 0.48
LINC00299-202ENST00000442956 GJD4Q96KN9 370 aaPredicted RBP18.08■□□□□ 0.48
LINC00299-202ENST00000442956 A0A087WZG4 1122 aa18.07■□□□□ 0.48
LINC00299-202ENST00000442956 RAB11FIP3O75154 756 aa18.07■□□□□ 0.48
LINC00299-202ENST00000442956 UBE3BQ7Z3V4 1068 aa18.07■□□□□ 0.48
LINC00299-202ENST00000442956 JARID2Q92833 1246 aaPredicted RBP18.07■□□□□ 0.48
LINC00299-202ENST00000442956 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.07■□□□□ 0.48
LINC00299-202ENST00000442956 KIF6Q6ZMV9 814 aa18.07■□□□□ 0.48
LINC00299-202ENST00000442956 ZBTB1Q9Y2K1 713 aa18.07■□□□□ 0.48
LINC00299-202ENST00000442956 LOC102724428A0A0B4J2F2 783 aa18.06■□□□□ 0.48
LINC00299-202ENST00000442956 SIK1P57059 783 aa18.06■□□□□ 0.48
LINC00299-202ENST00000442956 GSPT1P15170 499 aaKnown RBP18.06■□□□□ 0.48
LINC00299-202ENST00000442956 ARXQ96QS3 562 aa18.06■□□□□ 0.48
LINC00299-202ENST00000442956 CWC25Q9NXE8 425 aaPredicted RBP18.06■□□□□ 0.48
LINC00299-202ENST00000442956 NOP58Q9Y2X3 529 aaKnown RBP18.06■□□□□ 0.48
LINC00299-202ENST00000442956 PALLDQ8WX93 1383 aa18.06■□□□□ 0.48
LINC00299-202ENST00000442956 ATP6V1AP38606 617 aa18.05■□□□□ 0.48
LINC00299-202ENST00000442956 HSP90AB4PQ58FF6 505 aa18.05■□□□□ 0.48
LINC00299-202ENST00000442956 EPHA10Q5JZY3 1008 aa18.05■□□□□ 0.48
LINC00299-202ENST00000442956 TTC22Q5TAA0 569 aa18.05■□□□□ 0.48
LINC00299-202ENST00000442956 SMARCC1Q92922 1105 aaPredicted RBP18.05■□□□□ 0.48
LINC00299-202ENST00000442956 IL1RAPL2Q9NP60 686 aa18.05■□□□□ 0.48
LINC00299-202ENST00000442956 CASP7P55210 303 aa18.04■□□□□ 0.48
LINC00299-202ENST00000442956 CCDC191Q8NCU4 936 aa18.04■□□□□ 0.48
LINC00299-202ENST00000442956 RHPN1Q8TCX5 695 aa18.04■□□□□ 0.48
LINC00299-202ENST00000442956 KIF1BPQ96EK5 621 aa18.04■□□□□ 0.48
LINC00299-202ENST00000442956 TRPC5Q9UL62 973 aaPredicted RBP18.04■□□□□ 0.48
LINC00299-202ENST00000442956 MAP3K15Q6ZN16 1313 aa18.04■□□□□ 0.48
LINC00299-202ENST00000442956 H7C1W4 665 aa18.04■□□□□ 0.48
LINC00299-202ENST00000442956 PDE1AP54750 535 aa18.04■□□□□ 0.48
LINC00299-202ENST00000442956 TCIRG1Q13488 830 aa18.04■□□□□ 0.48
LINC00299-202ENST00000442956 PA2G4Q9UQ80 394 aaKnown RBP18.04■□□□□ 0.48
LINC00299-202ENST00000442956 NUP188Q5SRE5 1749 aa18.03■□□□□ 0.48
LINC00299-202ENST00000442956 COL15A1P39059 1388 aa18.03■□□□□ 0.48
LINC00299-202ENST00000442956 OS9Q13438 667 aaPredicted RBP18.03■□□□□ 0.48
LINC00299-202ENST00000442956 ISCA1Q9BUE6 129 aa18.03■□□□□ 0.48
LINC00299-202ENST00000442956 OSBPL3Q9H4L5 887 aa18.03■□□□□ 0.48
LINC00299-202ENST00000442956 UPF2Q9HAU5 1272 aaKnown RBP18.03■□□□□ 0.48
LINC00299-202ENST00000442956 THSD7AQ9UPZ6 1657 aa18.03■□□□□ 0.48
LINC00299-202ENST00000442956 ATRNO75882 1429 aa18.03■□□□□ 0.48
LINC00299-202ENST00000442956 SALL3Q9BXA9 1300 aa18.03■□□□□ 0.48
LINC00299-202ENST00000442956 IL6STP40189 918 aaPredicted RBP18.03■□□□□ 0.48
LINC00299-202ENST00000442956 ITPK1Q13572 414 aa18.03■□□□□ 0.48
LINC00299-202ENST00000442956 IPO9Q96P70 1041 aaKnown RBP18.03■□□□□ 0.48
LINC00299-202ENST00000442956 TJP1Q07157 1748 aa18.03■□□□□ 0.48
LINC00299-202ENST00000442956 MX1P20591 662 aa18.01■□□□□ 0.47
LINC00299-202ENST00000442956 RTL5Q5HYW3 569 aaPredicted RBP18.01■□□□□ 0.47
LINC00299-202ENST00000442956 INTS5Q6P9B9 1019 aaKnown RBP18.01■□□□□ 0.47
LINC00299-202ENST00000442956 CCDC87Q9NVE4 849 aa18.01■□□□□ 0.47
LINC00299-202ENST00000442956 CRKLP46109 303 aaKnown RBP18.01■□□□□ 0.47
LINC00299-202ENST00000442956 RABL6Q3YEC7 729 aaPredicted RBP18.01■□□□□ 0.47
LINC00299-202ENST00000442956 FAM182BQ5T319 152 aa18.01■□□□□ 0.47
LINC00299-202ENST00000442956 GIGYF2Q6Y7W6 1299 aaKnown RBP18.01■□□□□ 0.47
LINC00299-202ENST00000442956 ONECUT3O60422 494 aaPredicted RBP18■□□□□ 0.47
LINC00299-202ENST00000442956 TRIM28Q13263 835 aaKnown RBP18■□□□□ 0.47
LINC00299-202ENST00000442956 TSHZ3Q63HK5 1081 aa18■□□□□ 0.47
LINC00299-202ENST00000442956 PTF1AQ7RTS3 328 aa18■□□□□ 0.47
LINC00299-202ENST00000442956 AFDNP55196 1824 aaKnown RBP18■□□□□ 0.47
LINC00299-202ENST00000442956 HLFQ16534 295 aa18■□□□□ 0.47
LINC00299-202ENST00000442956 ERC1Q8IUD2 1116 aa18■□□□□ 0.47
LINC00299-202ENST00000442956 MSH5O43196 834 aa17.99■□□□□ 0.47
LINC00299-202ENST00000442956 MFAP1P55081 439 aaKnown RBP17.99■□□□□ 0.47
LINC00299-202ENST00000442956 TBC1D9Q6ZT07 1266 aa17.99■□□□□ 0.47
LINC00299-202ENST00000442956 DZIP3Q86Y13 1208 aaKnown RBP17.99■□□□□ 0.47
LINC00299-202ENST00000442956 STAP2Q9UGK3 403 aa17.99■□□□□ 0.47
LINC00299-202ENST00000442956 CDC45O75419 566 aa17.99■□□□□ 0.47
LINC00299-202ENST00000442956 SDSP20132 328 aa17.99■□□□□ 0.47
LINC00299-202ENST00000442956 EIF5P55010 431 aaKnown RBP17.99■□□□□ 0.47
LINC00299-202ENST00000442956 NUTM1Q86Y26 1132 aa17.99■□□□□ 0.47
LINC00299-202ENST00000442956 SEPT12Q8IYM1 358 aa17.99■□□□□ 0.47
LINC00299-202ENST00000442956 QTRT2Q9H974 415 aaKnown RBP17.99■□□□□ 0.47
LINC00299-202ENST00000442956 TBC1D2BQ9UPU7 963 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms