RNA–Protein interactions for RNA: ENST00000441024.6

CNOT1-202, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNOT1, Length 4,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-202ENST00000441024 NPATQ14207 1427 aa7.51□□□□□ -1.21
CNOT1-202ENST00000441024 IFIT5Q13325 482 aaKnown RBP7.51□□□□□ -1.21
CNOT1-202ENST00000441024 MAP3K11Q16584 847 aa7.51□□□□□ -1.21
CNOT1-202ENST00000441024 RUFY1Q96T51 708 aa7.51□□□□□ -1.21
CNOT1-202ENST00000441024 LUC7LQ9NQ29 371 aaKnown RBP7.51□□□□□ -1.21
CNOT1-202ENST00000441024 F6X3S4 739 aa7.51□□□□□ -1.21
CNOT1-202ENST00000441024 SLC5A1P13866 664 aa7.51□□□□□ -1.21
CNOT1-202ENST00000441024 IKQ13123 557 aaPredicted RBP7.51□□□□□ -1.21
CNOT1-202ENST00000441024 TTF1Q15361 905 aaPredicted RBP7.51□□□□□ -1.21
CNOT1-202ENST00000441024 ANKRD44Q8N8A2 993 aa7.51□□□□□ -1.21
CNOT1-202ENST00000441024 TBC1D2Q9BYX2 928 aa7.51□□□□□ -1.21
CNOT1-202ENST00000441024 PHAXQ9H814 394 aaKnown RBP7.51□□□□□ -1.21
CNOT1-202ENST00000441024 CTAGE5O15320 804 aa7.51□□□□□ -1.21
CNOT1-202ENST00000441024 SERPINC1P01008 464 aa7.51□□□□□ -1.21
CNOT1-202ENST00000441024 IGHDP01880 384 aa7.51□□□□□ -1.21
CNOT1-202ENST00000441024 SNRPA1P09661 255 aaKnown RBP7.51□□□□□ -1.21
CNOT1-202ENST00000441024 ATP2B1P20020 1258 aa7.51□□□□□ -1.21
CNOT1-202ENST00000441024 HSP90B2PQ58FF3 399 aa7.51□□□□□ -1.21
CNOT1-202ENST00000441024 CCDC183Q5T5S1 534 aa7.51□□□□□ -1.21
CNOT1-202ENST00000441024 TBC1D9Q6ZT07 1266 aa7.51□□□□□ -1.21
CNOT1-202ENST00000441024 PPFIBP1Q86W92 1011 aa7.51□□□□□ -1.21
CNOT1-202ENST00000441024 USHBP1Q8N6Y0 703 aa7.51□□□□□ -1.21
CNOT1-202ENST00000441024 ANKRD24Q8TF21 1146 aa7.51□□□□□ -1.21
CNOT1-202ENST00000441024 MYO6Q9UM54 1294 aa7.51□□□□□ -1.21
CNOT1-202ENST00000441024 FLT4P35916 1363 aa7.5□□□□□ -1.21
CNOT1-202ENST00000441024 ANKRD18BA2A2Z9 1011 aa7.5□□□□□ -1.21
CNOT1-202ENST00000441024 FOXO3O43524 673 aa7.5□□□□□ -1.21
CNOT1-202ENST00000441024 NAP1L1P55209 391 aaKnown RBP7.5□□□□□ -1.21
CNOT1-202ENST00000441024 CEBPZQ03701 1054 aaKnown RBP7.5□□□□□ -1.21
CNOT1-202ENST00000441024 MAP3K12Q12852 859 aa7.5□□□□□ -1.21
CNOT1-202ENST00000441024 CAVIN4Q5BKX8 364 aa7.5□□□□□ -1.21
CNOT1-202ENST00000441024 RNF41Q9H4P4 317 aaPredicted RBP7.5□□□□□ -1.21
CNOT1-202ENST00000441024 ZNF771Q7L3S4 317 aaPredicted RBP7.5□□□□□ -1.21
CNOT1-202ENST00000441024 BABAM1Q9NWV8 329 aa7.5□□□□□ -1.21
CNOT1-202ENST00000441024 MAP3K2Q9Y2U5 619 aa7.5□□□□□ -1.21
CNOT1-202ENST00000441024 ANAPC15P60006 121 aa7.5□□□□□ -1.21
CNOT1-202ENST00000441024 AKAP4Q5JQC9 854 aa7.5□□□□□ -1.21
CNOT1-202ENST00000441024 NUP133Q8WUM0 1156 aa7.5□□□□□ -1.21
CNOT1-202ENST00000441024 CWC25Q9NXE8 425 aaPredicted RBP7.5□□□□□ -1.21
CNOT1-202ENST00000441024 YTHDC2Q9H6S0 1430 aaKnown RBP7.5□□□□□ -1.21
CNOT1-202ENST00000441024 PER1O15534 1290 aaPredicted RBP7.5□□□□□ -1.21
CNOT1-202ENST00000441024 IDH1O75874 414 aaKnown RBP7.5□□□□□ -1.21
CNOT1-202ENST00000441024 CEBPAP49715 358 aaPredicted RBP7.5□□□□□ -1.21
CNOT1-202ENST00000441024 BOLA2Q9H3K6 86 aa7.5□□□□□ -1.21
CNOT1-202ENST00000441024 POLKQ9UBT6 870 aa7.5□□□□□ -1.21
CNOT1-202ENST00000441024 STRCQ7RTU9 1775 aa7.5□□□□□ -1.21
CNOT1-202ENST00000441024 A0A087WZG4 1122 aa7.49□□□□□ -1.21
CNOT1-202ENST00000441024 ATP8B2P98198 1209 aa7.49□□□□□ -1.21
CNOT1-202ENST00000441024 AKAP12Q02952 1782 aa7.49□□□□□ -1.21
CNOT1-202ENST00000441024 NALCNQ8IZF0 1738 aa7.49□□□□□ -1.21
CNOT1-202ENST00000441024 KRT18P05783 430 aaKnown RBP7.49□□□□□ -1.21
CNOT1-202ENST00000441024 CCDC83Q8IWF9 413 aa7.49□□□□□ -1.21
CNOT1-202ENST00000441024 NUTM2BA6NNL0 878 aaPredicted RBP7.49□□□□□ -1.21
CNOT1-202ENST00000441024 NUTM2EB1AL46 878 aaPredicted RBP7.49□□□□□ -1.21
CNOT1-202ENST00000441024 KIF2AO00139 706 aaPredicted RBP7.49□□□□□ -1.21
CNOT1-202ENST00000441024 PPP1R42Q7Z4L9 355 aa7.49□□□□□ -1.21
CNOT1-202ENST00000441024 NUTM2AQ8IVF1 878 aaPredicted RBP7.49□□□□□ -1.21
CNOT1-202ENST00000441024 UPF3BQ9BZI7 483 aaKnown RBP7.49□□□□□ -1.21
CNOT1-202ENST00000441024 BMP2KQ9NSY1 1161 aaPredicted RBP7.49□□□□□ -1.21
CNOT1-202ENST00000441024 ADGRB2O60241 1585 aa7.49□□□□□ -1.21
CNOT1-202ENST00000441024 RDXP35241 583 aaKnown RBP7.49□□□□□ -1.21
CNOT1-202ENST00000441024 CAGE1Q8TC20 777 aa7.49□□□□□ -1.21
CNOT1-202ENST00000441024 SNX21Q969T3 373 aa7.49□□□□□ -1.21
CNOT1-202ENST00000441024 EXOC5O00471 708 aa7.48□□□□□ -1.21
CNOT1-202ENST00000441024 EIF4A2Q14240 407 aaKnown RBP7.48□□□□□ -1.21
CNOT1-202ENST00000441024 CT47A1Q5JQC4 288 aaPredicted RBP7.48□□□□□ -1.21
CNOT1-202ENST00000441024 ANO10Q9NW15 660 aa7.48□□□□□ -1.21
CNOT1-202ENST00000441024 BRPF3Q9ULD4 1205 aa7.48□□□□□ -1.21
CNOT1-202ENST00000441024 MED14O60244 1454 aa7.48□□□□□ -1.21
CNOT1-202ENST00000441024 MYOM2P54296 1465 aa7.48□□□□□ -1.21
CNOT1-202ENST00000441024 SLF2Q8IX21 1173 aa7.48□□□□□ -1.21
CNOT1-202ENST00000441024 DDX19AQ9NUU7 478 aaKnown RBP7.48□□□□□ -1.21
CNOT1-202ENST00000441024 UQCRFS1P1P0C7P4 283 aa7.48□□□□□ -1.21
CNOT1-202ENST00000441024 RHPN1Q8TCX5 695 aa7.48□□□□□ -1.21
CNOT1-202ENST00000441024 CCDC8Q9H0W5 538 aaPredicted RBP7.48□□□□□ -1.21
CNOT1-202ENST00000441024 NAPBQ9H115 298 aa7.48□□□□□ -1.21
CNOT1-202ENST00000441024 TRMT112Q9UI30 125 aaKnown RBP7.48□□□□□ -1.21
CNOT1-202ENST00000441024 MTMR7Q9Y216 660 aa7.48□□□□□ -1.21
CNOT1-202ENST00000441024 TBX22Q9Y458 520 aa7.48□□□□□ -1.21
CNOT1-202ENST00000441024 NPHP3Q7Z494 1330 aa7.48□□□□□ -1.21
CNOT1-202ENST00000441024 CHD2O14647 1828 aaKnown RBP7.48□□□□□ -1.21
CNOT1-202ENST00000441024 MSH6P52701 1360 aa7.48□□□□□ -1.21
CNOT1-202ENST00000441024 PI4KAP2A4QPH2 592 aa7.48□□□□□ -1.21
CNOT1-202ENST00000441024 FAM83GA6ND36 823 aa7.48□□□□□ -1.21
CNOT1-202ENST00000441024 ZNF213O14771 459 aa7.48□□□□□ -1.21
CNOT1-202ENST00000441024 PTCD1O75127 700 aaKnown RBP7.48□□□□□ -1.21
CNOT1-202ENST00000441024 KDM4AO75164 1064 aa7.48□□□□□ -1.21
CNOT1-202ENST00000441024 ZPR1O75312 459 aa7.48□□□□□ -1.21
CNOT1-202ENST00000441024 CAVIN2O95810 425 aa7.48□□□□□ -1.21
CNOT1-202ENST00000441024 ZSCAN30Q86W11 494 aa7.48□□□□□ -1.21
CNOT1-202ENST00000441024 PI4KAP1Q8N8J0 262 aa7.48□□□□□ -1.21
CNOT1-202ENST00000441024 TNPO1Q92973 898 aaKnown RBP7.48□□□□□ -1.21
CNOT1-202ENST00000441024 A0A1W2PP64 1363 aa7.47□□□□□ -1.21
CNOT1-202ENST00000441024 ESPNB1AK53 854 aa7.47□□□□□ -1.21
CNOT1-202ENST00000441024 ZFYP08048 801 aaPredicted RBP7.47□□□□□ -1.21
CNOT1-202ENST00000441024 EDC4Q6P2E9 1401 aaKnown RBP7.47□□□□□ -1.21
CNOT1-202ENST00000441024 UVSSAQ2YD98 709 aa7.47□□□□□ -1.21
CNOT1-202ENST00000441024 HSP90AB2PQ58FF8 381 aa7.47□□□□□ -1.21
CNOT1-202ENST00000441024 KSR2Q6VAB6 950 aa7.47□□□□□ -1.21
CNOT1-202ENST00000441024 CCDC112Q8NEF3 446 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms