RNA–Protein interactions for RNA: ENST00000440400.1

ACTN4-204, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-204ENST00000440400 COL5A3P25940 1745 aaPredicted RBP16.27■□□□□ 0.2
ACTN4-204ENST00000440400 CDC45O75419 566 aa16.27■□□□□ 0.19
ACTN4-204ENST00000440400 TBC1D9Q6ZT07 1266 aa16.27■□□□□ 0.19
ACTN4-204ENST00000440400 C16orf71Q8IYS4 520 aaPredicted RBP16.27■□□□□ 0.19
ACTN4-204ENST00000440400 UPF2Q9HAU5 1272 aaKnown RBP16.27■□□□□ 0.19
ACTN4-204ENST00000440400 AK9Q5TCS8 1911 aa16.27■□□□□ 0.19
ACTN4-204ENST00000440400 SPATA31A1Q5TZJ5 1347 aa16.26■□□□□ 0.19
ACTN4-204ENST00000440400 NEURL1BA8MQ27 555 aa16.26■□□□□ 0.19
ACTN4-204ENST00000440400 PPP1R42Q7Z4L9 355 aa16.26■□□□□ 0.19
ACTN4-204ENST00000440400 HSP90AA1P07900 732 aaKnown RBP16.26■□□□□ 0.19
ACTN4-204ENST00000440400 OTUD7AQ8TE49 926 aaPredicted RBP16.26■□□□□ 0.19
ACTN4-204ENST00000440400 STRN4Q9NRL3 753 aa16.26■□□□□ 0.19
ACTN4-204ENST00000440400 GRM8O00222 908 aa16.26■□□□□ 0.19
ACTN4-204ENST00000440400 PDE1AP54750 535 aa16.26■□□□□ 0.19
ACTN4-204ENST00000440400 XAGE3Q8WTP9 111 aa16.26■□□□□ 0.19
ACTN4-204ENST00000440400 NBPF26B4DH59 902 aa16.25■□□□□ 0.19
ACTN4-204ENST00000440400 NBPF14Q5TI25 921 aa16.25■□□□□ 0.19
ACTN4-204ENST00000440400 NBPF10Q6P3W6 841 aaKnown RBP16.25■□□□□ 0.19
ACTN4-204ENST00000440400 NBPF15Q8N660 670 aa16.25■□□□□ 0.19
ACTN4-204ENST00000440400 PLBD2Q8NHP8 589 aa16.25■□□□□ 0.19
ACTN4-204ENST00000440400 CASP7P55210 303 aa16.25■□□□□ 0.19
ACTN4-204ENST00000440400 SMARCA5O60264 1052 aaPredicted RBP16.24■□□□□ 0.19
ACTN4-204ENST00000440400 C22orf23Q9BZE7 217 aa16.24■□□□□ 0.19
ACTN4-204ENST00000440400 PDE4CQ08493 712 aa16.24■□□□□ 0.19
ACTN4-204ENST00000440400 PDIA4P13667 645 aaKnown RBP16.24■□□□□ 0.19
ACTN4-204ENST00000440400 GCKRQ14397 625 aa16.24■□□□□ 0.19
ACTN4-204ENST00000440400 COPS6Q7L5N1 327 aa16.24■□□□□ 0.19
ACTN4-204ENST00000440400 HSP90AB4PQ58FF6 505 aa16.23■□□□□ 0.19
ACTN4-204ENST00000440400 BARGINQ6ZT62 677 aa16.23■□□□□ 0.19
ACTN4-204ENST00000440400 SPATA31A5Q5VU36 1347 aa16.23■□□□□ 0.19
ACTN4-204ENST00000440400 SPATA31A7Q8IWB4 1347 aa16.23■□□□□ 0.19
ACTN4-204ENST00000440400 RABL6Q3YEC7 729 aaPredicted RBP16.23■□□□□ 0.19
ACTN4-204ENST00000440400 ANKRD13DQ6ZTN6 518 aa16.23■□□□□ 0.19
ACTN4-204ENST00000440400 EXOC6BQ9Y2D4 811 aa16.23■□□□□ 0.19
ACTN4-204ENST00000440400 IL17RAQ96F46 866 aa16.22■□□□□ 0.19
ACTN4-204ENST00000440400 SDSP20132 328 aa16.22■□□□□ 0.19
ACTN4-204ENST00000440400 CWF19L2Q2TBE0 894 aaKnown RBP16.22■□□□□ 0.19
ACTN4-204ENST00000440400 SUCLG2Q96I99 432 aa16.22■□□□□ 0.19
ACTN4-204ENST00000440400 KIF2CQ99661 725 aa16.22■□□□□ 0.19
ACTN4-204ENST00000440400 TEX13AQ9BXU3 409 aaPredicted RBP16.22■□□□□ 0.19
ACTN4-204ENST00000440400 BCORQ6W2J9 1755 aa16.21■□□□□ 0.19
ACTN4-204ENST00000440400 TOM1O60784 492 aa16.21■□□□□ 0.19
ACTN4-204ENST00000440400 PIGBQ92521 554 aa16.21■□□□□ 0.19
ACTN4-204ENST00000440400 KIF1BPQ96EK5 621 aa16.21■□□□□ 0.19
ACTN4-204ENST00000440400 AEBP2Q6ZN18 517 aaPredicted RBP16.21■□□□□ 0.19
ACTN4-204ENST00000440400 ATG3Q9NT62 314 aa16.21■□□□□ 0.19
ACTN4-204ENST00000440400 LAMB2P55268 1798 aa16.21■□□□□ 0.18
ACTN4-204ENST00000440400 MX1P20591 662 aa16.2■□□□□ 0.18
ACTN4-204ENST00000440400 SNX21Q969T3 373 aa16.2■□□□□ 0.18
ACTN4-204ENST00000440400 TMOD3Q9NYL9 352 aa16.2■□□□□ 0.18
ACTN4-204ENST00000440400 SRGAP3O43295 1099 aa16.2■□□□□ 0.18
ACTN4-204ENST00000440400 RIC3Q7Z5B4 369 aa16.2■□□□□ 0.18
ACTN4-204ENST00000440400 RHPN1Q8TCX5 695 aa16.2■□□□□ 0.18
ACTN4-204ENST00000440400 EPB41L2O43491 1005 aaKnown RBP16.19■□□□□ 0.18
ACTN4-204ENST00000440400 RRP9O43818 475 aaKnown RBP16.19■□□□□ 0.18
ACTN4-204ENST00000440400 NEXNQ0ZGT2 675 aa16.19■□□□□ 0.18
ACTN4-204ENST00000440400 BCL9LQ86UU0 1499 aa16.19■□□□□ 0.18
ACTN4-204ENST00000440400 NHSQ6T4R5 1651 aa16.19■□□□□ 0.18
ACTN4-204ENST00000440400 MYL6BP14649 208 aa16.19■□□□□ 0.18
ACTN4-204ENST00000440400 PI4K2BQ8TCG2 481 aa16.19■□□□□ 0.18
ACTN4-204ENST00000440400 DDX54Q8TDD1 881 aaKnown RBP16.19■□□□□ 0.18
ACTN4-204ENST00000440400 C9orf78Q9NZ63 289 aaPredicted RBP16.19■□□□□ 0.18
ACTN4-204ENST00000440400 MFAP1P55081 439 aaKnown RBP16.18■□□□□ 0.18
ACTN4-204ENST00000440400 ERC1Q8IUD2 1116 aa16.18■□□□□ 0.18
ACTN4-204ENST00000440400 H7C1W4 665 aa16.18■□□□□ 0.18
ACTN4-204ENST00000440400 RFX5P48382 616 aaPredicted RBP16.18■□□□□ 0.18
ACTN4-204ENST00000440400 TTC41PQ6P2S7 1318 aa16.18■□□□□ 0.18
ACTN4-204ENST00000440400 BICC1Q9H694 974 aaKnown RBP16.18■□□□□ 0.18
ACTN4-204ENST00000440400 NUP98P52948 1817 aa16.17■□□□□ 0.18
ACTN4-204ENST00000440400 LRP5O75197 1615 aa16.17■□□□□ 0.18
ACTN4-204ENST00000440400 JCADQ9P266 1359 aa16.17■□□□□ 0.18
ACTN4-204ENST00000440400 MYD88Q99836 296 aa16.17■□□□□ 0.18
ACTN4-204ENST00000440400 TRIM28Q13263 835 aaKnown RBP16.17■□□□□ 0.18
ACTN4-204ENST00000440400 RBM10P98175 930 aaKnown RBP16.16■□□□□ 0.18
ACTN4-204ENST00000440400 BECN1Q14457 450 aa16.16■□□□□ 0.18
ACTN4-204ENST00000440400 AIMP1Q12904 312 aaKnown RBP16.16■□□□□ 0.18
ACTN4-204ENST00000440400 ISCA1Q9BUE6 129 aa16.16■□□□□ 0.18
ACTN4-204ENST00000440400 SURF6O75683 361 aaKnown RBP16.16■□□□□ 0.18
ACTN4-204ENST00000440400 TBC1D2Q9BYX2 928 aa16.16■□□□□ 0.18
ACTN4-204ENST00000440400 COPRSQ9NQ92 184 aa16.16■□□□□ 0.18
ACTN4-204ENST00000440400 EXOC5O00471 708 aa16.15■□□□□ 0.18
ACTN4-204ENST00000440400 USP26Q9BXU7 913 aa16.15■□□□□ 0.18
ACTN4-204ENST00000440400 ANTXR1Q9H6X2 564 aa16.15■□□□□ 0.18
ACTN4-204ENST00000440400 MYH3P11055 1940 aa16.15■□□□□ 0.18
ACTN4-204ENST00000440400 SLC4A9Q96Q91 983 aa16.14■□□□□ 0.17
ACTN4-204ENST00000440400 ASAP1Q9ULH1 1129 aa16.14■□□□□ 0.17
ACTN4-204ENST00000440400 EPHA10Q5JZY3 1008 aa16.14■□□□□ 0.17
ACTN4-204ENST00000440400 CCDC191Q8NCU4 936 aa16.14■□□□□ 0.17
ACTN4-204ENST00000440400 SPEF2Q9C093 1822 aa16.14■□□□□ 0.17
ACTN4-204ENST00000440400 FOXO4P98177 505 aa16.14■□□□□ 0.17
ACTN4-204ENST00000440400 A1BGP04217 495 aa16.13■□□□□ 0.17
ACTN4-204ENST00000440400 CYP19A1P11511 503 aaPredicted RBP16.13■□□□□ 0.17
ACTN4-204ENST00000440400 TTLL7Q6ZT98 887 aa16.13■□□□□ 0.17
ACTN4-204ENST00000440400 SASH1O94885 1247 aa16.12■□□□□ 0.17
ACTN4-204ENST00000440400 DDIT3P35638 169 aa16.12■□□□□ 0.17
ACTN4-204ENST00000440400 FNBP4Q8N3X1 1017 aaPredicted RBP16.12■□□□□ 0.17
ACTN4-204ENST00000440400 PLA2G12BQ9BX93 195 aa16.12■□□□□ 0.17
ACTN4-204ENST00000440400 LY75O60449 1722 aa16.12■□□□□ 0.17
ACTN4-204ENST00000440400 SPATA31A6Q5VVP1 1343 aa16.12■□□□□ 0.17
ACTN4-204ENST00000440400 SCN7AQ01118 1682 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms