RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 CCDC9Q9Y3X0 531 aaKnown RBP18.99■□□□□ 0.63
SGCE-205ENST00000437425 NBPF26B4DH59 902 aa18.98■□□□□ 0.63
SGCE-205ENST00000437425 NBPF14Q5TI25 921 aa18.98■□□□□ 0.63
SGCE-205ENST00000437425 NBPF10Q6P3W6 841 aaKnown RBP18.98■□□□□ 0.63
SGCE-205ENST00000437425 NBPF15Q8N660 670 aa18.98■□□□□ 0.63
SGCE-205ENST00000437425 NGLY1Q96IV0 654 aa18.98■□□□□ 0.63
SGCE-205ENST00000437425 MYD88Q99836 296 aa18.98■□□□□ 0.63
SGCE-205ENST00000437425 EXOC6BQ9Y2D4 811 aa18.98■□□□□ 0.63
SGCE-205ENST00000437425 AOX1Q06278 1338 aa18.98■□□□□ 0.63
SGCE-205ENST00000437425 ARFGEF2Q9Y6D5 1785 aa18.97■□□□□ 0.63
SGCE-205ENST00000437425 RGS17Q9UGC6 210 aaPredicted RBP18.97■□□□□ 0.63
SGCE-205ENST00000437425 ASAP1Q9ULH1 1129 aa18.97■□□□□ 0.63
SGCE-205ENST00000437425 CDC45O75419 566 aa18.96■□□□□ 0.63
SGCE-205ENST00000437425 SURF6O75683 361 aaKnown RBP18.96■□□□□ 0.63
SGCE-205ENST00000437425 CASC1Q6TDU7 716 aa18.96■□□□□ 0.63
SGCE-205ENST00000437425 ERICH6Q7L0X2 663 aa18.95■□□□□ 0.62
SGCE-205ENST00000437425 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.95■□□□□ 0.62
SGCE-205ENST00000437425 A1BGP04217 495 aa18.95■□□□□ 0.62
SGCE-205ENST00000437425 TBC1D32Q96NH3 1257 aa18.95■□□□□ 0.62
SGCE-205ENST00000437425 STAP2Q9UGK3 403 aa18.95■□□□□ 0.62
SGCE-205ENST00000437425 BCL9LQ86UU0 1499 aa18.94■□□□□ 0.62
SGCE-205ENST00000437425 APBB1O00213 710 aa18.94■□□□□ 0.62
SGCE-205ENST00000437425 PDE1AP54750 535 aa18.94■□□□□ 0.62
SGCE-205ENST00000437425 CCDC191Q8NCU4 936 aa18.94■□□□□ 0.62
SGCE-205ENST00000437425 C8orf37Q96NL8 207 aa18.94■□□□□ 0.62
SGCE-205ENST00000437425 RBM42Q9BTD8 480 aaKnown RBP18.94■□□□□ 0.62
SGCE-205ENST00000437425 DOT1LQ8TEK3 1739 aa18.93■□□□□ 0.62
SGCE-205ENST00000437425 SMARCA5O60264 1052 aaPredicted RBP18.93■□□□□ 0.62
SGCE-205ENST00000437425 SEC24BO95487 1268 aa18.93■□□□□ 0.62
SGCE-205ENST00000437425 PRIM1P49642 420 aaKnown RBP18.93■□□□□ 0.62
SGCE-205ENST00000437425 KIF6Q6ZMV9 814 aa18.93■□□□□ 0.62
SGCE-205ENST00000437425 SMARCC1Q92922 1105 aaPredicted RBP18.93■□□□□ 0.62
SGCE-205ENST00000437425 SUCLG2Q96I99 432 aa18.93■□□□□ 0.62
SGCE-205ENST00000437425 DAXXQ9UER7 740 aaPredicted RBP18.93■□□□□ 0.62
SGCE-205ENST00000437425 SALL3Q9BXA9 1300 aa18.92■□□□□ 0.62
SGCE-205ENST00000437425 MX1P20591 662 aa18.92■□□□□ 0.62
SGCE-205ENST00000437425 DNAJC10Q8IXB1 793 aa18.92■□□□□ 0.62
SGCE-205ENST00000437425 C16orf71Q8IYS4 520 aaPredicted RBP18.92■□□□□ 0.62
SGCE-205ENST00000437425 RHPN1Q8TCX5 695 aa18.92■□□□□ 0.62
SGCE-205ENST00000437425 SYTL4Q96C24 671 aaPredicted RBP18.92■□□□□ 0.62
SGCE-205ENST00000437425 CWC25Q9NXE8 425 aaPredicted RBP18.92■□□□□ 0.62
SGCE-205ENST00000437425 NUP188Q5SRE5 1749 aa18.92■□□□□ 0.62
SGCE-205ENST00000437425 GSPT1P15170 499 aaKnown RBP18.91■□□□□ 0.62
SGCE-205ENST00000437425 TRIM28Q13263 835 aaKnown RBP18.91■□□□□ 0.62
SGCE-205ENST00000437425 HSP90AB3PQ58FF7 597 aa18.91■□□□□ 0.62
SGCE-205ENST00000437425 MARCH10Q8NA82 808 aaPredicted RBP18.91■□□□□ 0.62
SGCE-205ENST00000437425 BICC1Q9H694 974 aaKnown RBP18.91■□□□□ 0.62
SGCE-205ENST00000437425 AFDNP55196 1824 aaKnown RBP18.91■□□□□ 0.62
SGCE-205ENST00000437425 A0A087WZG4 1122 aa18.9■□□□□ 0.62
SGCE-205ENST00000437425 MSH5O43196 834 aa18.9■□□□□ 0.62
SGCE-205ENST00000437425 CYP19A1P11511 503 aaPredicted RBP18.9■□□□□ 0.62
SGCE-205ENST00000437425 PIP4K2AP48426 406 aaPredicted RBP18.9■□□□□ 0.62
SGCE-205ENST00000437425 OS9Q13438 667 aaPredicted RBP18.9■□□□□ 0.62
SGCE-205ENST00000437425 CICQ96RK0 1608 aaPredicted RBP18.9■□□□□ 0.62
SGCE-205ENST00000437425 H7C1W4 665 aa18.9■□□□□ 0.62
SGCE-205ENST00000437425 BECN1Q14457 450 aa18.9■□□□□ 0.62
SGCE-205ENST00000437425 RABL6Q3YEC7 729 aaPredicted RBP18.9■□□□□ 0.62
SGCE-205ENST00000437425 TBC1D9Q6ZT07 1266 aa18.9■□□□□ 0.62
SGCE-205ENST00000437425 TTLL7Q6ZT98 887 aa18.9■□□□□ 0.62
SGCE-205ENST00000437425 C22orf23Q9BZE7 217 aa18.9■□□□□ 0.62
SGCE-205ENST00000437425 IL6STP40189 918 aaPredicted RBP18.89■□□□□ 0.61
SGCE-205ENST00000437425 MFAP1P55081 439 aaKnown RBP18.89■□□□□ 0.61
SGCE-205ENST00000437425 G3BP1Q13283 466 aaKnown RBP eCLIP18.89■□□□□ 0.61
SGCE-205ENST00000437425 CLASRPQ8N2M8 674 aaKnown RBP18.89■□□□□ 0.61
SGCE-205ENST00000437425 KAZALD1Q96I82 304 aa18.89■□□□□ 0.61
SGCE-205ENST00000437425 USP21Q9UK80 565 aa18.89■□□□□ 0.61
SGCE-205ENST00000437425 TCIRG1Q13488 830 aa18.88■□□□□ 0.61
SGCE-205ENST00000437425 GPATCH3Q96I76 525 aa18.88■□□□□ 0.61
SGCE-205ENST00000437425 TTC41PQ6P2S7 1318 aa18.87■□□□□ 0.61
SGCE-205ENST00000437425 SDSP20132 328 aa18.87■□□□□ 0.61
SGCE-205ENST00000437425 RBM25P49756 843 aaKnown RBP18.87■□□□□ 0.61
SGCE-205ENST00000437425 OTUD7AQ8TE49 926 aaPredicted RBP18.87■□□□□ 0.61
SGCE-205ENST00000437425 ISCA1Q9BUE6 129 aa18.87■□□□□ 0.61
SGCE-205ENST00000437425 MAP3K15Q6ZN16 1313 aa18.87■□□□□ 0.61
SGCE-205ENST00000437425 USP42Q9H9J4 1324 aaKnown RBP18.87■□□□□ 0.61
SGCE-205ENST00000437425 ERVV-1B6SEH8 477 aa18.86■□□□□ 0.61
SGCE-205ENST00000437425 ATP5J2-PTCD1G3V325 749 aa18.86■□□□□ 0.61
SGCE-205ENST00000437425 CASP7P55210 303 aa18.86■□□□□ 0.61
SGCE-205ENST00000437425 FAM98CQ17RN3 349 aaKnown RBP18.86■□□□□ 0.61
SGCE-205ENST00000437425 UBE3BQ7Z3V4 1068 aa18.86■□□□□ 0.61
SGCE-205ENST00000437425 COPRSQ9NQ92 184 aa18.86■□□□□ 0.61
SGCE-205ENST00000437425 ZNF831Q5JPB2 1677 aa18.86■□□□□ 0.61
SGCE-205ENST00000437425 ERC2O15083 957 aa18.85■□□□□ 0.61
SGCE-205ENST00000437425 MEX3CQ5U5Q3 659 aaKnown RBP18.85■□□□□ 0.61
SGCE-205ENST00000437425 ZBTB3Q9H5J0 574 aa18.85■□□□□ 0.61
SGCE-205ENST00000437425 GIGYF2Q6Y7W6 1299 aaKnown RBP18.84■□□□□ 0.61
SGCE-205ENST00000437425 TJP1Q07157 1748 aa18.84■□□□□ 0.61
SGCE-205ENST00000437425 POTEAQ6S8J7 498 aa18.84■□□□□ 0.61
SGCE-205ENST00000437425 SLC4A9Q96Q91 983 aa18.84■□□□□ 0.61
SGCE-205ENST00000437425 IL1RAPL2Q9NP60 686 aa18.84■□□□□ 0.61
SGCE-205ENST00000437425 LOC102724428A0A0B4J2F2 783 aa18.83■□□□□ 0.6
SGCE-205ENST00000437425 REC8O95072 547 aa18.83■□□□□ 0.6
SGCE-205ENST00000437425 SIK1P57059 783 aa18.83■□□□□ 0.6
SGCE-205ENST00000437425 GLRX3O76003 335 aaKnown RBP18.82■□□□□ 0.6
SGCE-205ENST00000437425 IFIT2P09913 472 aaKnown RBP18.82■□□□□ 0.6
SGCE-205ENST00000437425 THSD7AQ9UPZ6 1657 aa18.82■□□□□ 0.6
SGCE-205ENST00000437425 PALLDQ8WX93 1383 aa18.82■□□□□ 0.6
SGCE-205ENST00000437425 EPB41L2O43491 1005 aaKnown RBP18.81■□□□□ 0.6
SGCE-205ENST00000437425 PCCAP05165 728 aaPredicted RBP18.81■□□□□ 0.6
SGCE-205ENST00000437425 ATP6V1AP38606 617 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms