RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 BAG6P46379 1132 aa18.33■□□□□ 0.52
NEDD4-202ENST00000435532 CATIPQ7Z7H3 387 aa18.33■□□□□ 0.52
NEDD4-202ENST00000435532 CCDC12Q8WUD4 166 aaPredicted RBP18.33■□□□□ 0.52
NEDD4-202ENST00000435532 HOXC9P31274 260 aa18.33■□□□□ 0.52
NEDD4-202ENST00000435532 TRAF1Q13077 416 aa18.33■□□□□ 0.52
NEDD4-202ENST00000435532 PHAXQ9H814 394 aaKnown RBP18.33■□□□□ 0.52
NEDD4-202ENST00000435532 CCNL1Q9UK58 526 aaPredicted RBP18.32■□□□□ 0.52
NEDD4-202ENST00000435532 ANKRD2Q9GZV1 360 aa18.32■□□□□ 0.52
NEDD4-202ENST00000435532 SLC12A7Q9Y666 1083 aa18.32■□□□□ 0.52
NEDD4-202ENST00000435532 CHPF2Q9P2E5 772 aa18.32■□□□□ 0.52
NEDD4-202ENST00000435532 FAM83GA6ND36 823 aa18.32■□□□□ 0.52
NEDD4-202ENST00000435532 COPS6Q7L5N1 327 aa18.32■□□□□ 0.52
NEDD4-202ENST00000435532 KIF5BP33176 963 aa18.31■□□□□ 0.52
NEDD4-202ENST00000435532 SLC39A6Q13433 755 aa18.31■□□□□ 0.52
NEDD4-202ENST00000435532 CEP57L1Q8IYX8 460 aa18.31■□□□□ 0.52
NEDD4-202ENST00000435532 RAB34Q9BZG1 259 aa18.31■□□□□ 0.52
NEDD4-202ENST00000435532 TXLNBQ8N3L3 684 aa18.31■□□□□ 0.52
NEDD4-202ENST00000435532 LUC7LQ9NQ29 371 aaKnown RBP18.31■□□□□ 0.52
NEDD4-202ENST00000435532 ZNHIT6Q9NWK9 470 aaKnown RBP18.31■□□□□ 0.52
NEDD4-202ENST00000435532 CASTP20810 708 aaKnown RBP18.31■□□□□ 0.52
NEDD4-202ENST00000435532 ECHDC1Q9NTX5 307 aa18.31■□□□□ 0.52
NEDD4-202ENST00000435532 GNPATO15228 680 aa18.31■□□□□ 0.52
NEDD4-202ENST00000435532 TMEM2Q9UHN6 1383 aa18.3■□□□□ 0.52
NEDD4-202ENST00000435532 DHX8Q14562 1220 aaKnown RBP18.3■□□□□ 0.52
NEDD4-202ENST00000435532 MYO6Q9UM54 1294 aa18.3■□□□□ 0.52
NEDD4-202ENST00000435532 K7ELQ4 463 aaPredicted RBP18.3■□□□□ 0.52
NEDD4-202ENST00000435532 KSR2Q6VAB6 950 aa18.3■□□□□ 0.52
NEDD4-202ENST00000435532 ZNF592Q92610 1267 aa18.3■□□□□ 0.52
NEDD4-202ENST00000435532 ZC3H12CQ9C0D7 883 aaKnown RBP18.3■□□□□ 0.52
NEDD4-202ENST00000435532 FIBPO43427 364 aa18.29■□□□□ 0.52
NEDD4-202ENST00000435532 DNMT1P26358 1616 aaKnown RBP18.29■□□□□ 0.52
NEDD4-202ENST00000435532 NFATC2IPQ8NCF5 419 aa18.29■□□□□ 0.52
NEDD4-202ENST00000435532 TANGO6Q9C0B7 1094 aa18.29■□□□□ 0.52
NEDD4-202ENST00000435532 TMEM266Q2M3C6 531 aa18.29■□□□□ 0.52
NEDD4-202ENST00000435532 SMARCA5O60264 1052 aaPredicted RBP18.28■□□□□ 0.52
NEDD4-202ENST00000435532 PIK3C2GO75747 1445 aa18.28■□□□□ 0.52
NEDD4-202ENST00000435532 SOS1Q07889 1333 aaPredicted RBP18.28■□□□□ 0.52
NEDD4-202ENST00000435532 IFIT3O14879 490 aaKnown RBP18.28■□□□□ 0.52
NEDD4-202ENST00000435532 BAG4O95429 457 aaKnown RBP18.28■□□□□ 0.52
NEDD4-202ENST00000435532 KAT14Q9H8E8 782 aa18.28■□□□□ 0.52
NEDD4-202ENST00000435532 GOLIM4O00461 696 aa18.28■□□□□ 0.52
NEDD4-202ENST00000435532 PRPF40BQ6NWY9 871 aaKnown RBP18.28■□□□□ 0.52
NEDD4-202ENST00000435532 MAPKBP1O60336 1514 aa18.28■□□□□ 0.52
NEDD4-202ENST00000435532 SMC2O95347 1197 aa18.28■□□□□ 0.52
NEDD4-202ENST00000435532 PPP1R12BO60237 982 aaPredicted RBP18.27■□□□□ 0.52
NEDD4-202ENST00000435532 CDR1P51861 262 aa18.27■□□□□ 0.52
NEDD4-202ENST00000435532 POLKQ9UBT6 870 aa18.27■□□□□ 0.52
NEDD4-202ENST00000435532 CCDC39Q9UFE4 941 aa18.27■□□□□ 0.52
NEDD4-202ENST00000435532 PTPRKQ15262 1439 aa18.27■□□□□ 0.52
NEDD4-202ENST00000435532 CHMP4BP1P59074 171 aa18.27■□□□□ 0.52
NEDD4-202ENST00000435532 TSPY2A6NKD2 308 aa18.27■□□□□ 0.52
NEDD4-202ENST00000435532 RNMTO43148 476 aaKnown RBP18.27■□□□□ 0.52
NEDD4-202ENST00000435532 ZFYP08048 801 aaPredicted RBP18.27■□□□□ 0.52
NEDD4-202ENST00000435532 SSRP1Q08945 709 aaKnown RBP18.27■□□□□ 0.52
NEDD4-202ENST00000435532 ATP2B3Q16720 1220 aa18.27■□□□□ 0.52
NEDD4-202ENST00000435532 ARHGAP45Q92619 1136 aa18.27■□□□□ 0.52
NEDD4-202ENST00000435532 MTHFSDQ2M296 383 aaKnown RBP18.27■□□□□ 0.51
NEDD4-202ENST00000435532 MYCNP04198 464 aaPredicted RBP18.26■□□□□ 0.51
NEDD4-202ENST00000435532 IL15P40933 162 aaPredicted RBP18.26■□□□□ 0.51
NEDD4-202ENST00000435532 CCP110O43303 1012 aa18.26■□□□□ 0.51
NEDD4-202ENST00000435532 PLCG2P16885 1265 aa18.26■□□□□ 0.51
NEDD4-202ENST00000435532 GOLGA8AA7E2F4 631 aa18.26■□□□□ 0.51
NEDD4-202ENST00000435532 GOLGA8BA8MQT2 603 aa18.26■□□□□ 0.51
NEDD4-202ENST00000435532 PLEKHH1Q9ULM0 1364 aa18.25■□□□□ 0.51
NEDD4-202ENST00000435532 FAM98CQ17RN3 349 aaKnown RBP18.25■□□□□ 0.51
NEDD4-202ENST00000435532 EDC4Q6P2E9 1401 aaKnown RBP18.25■□□□□ 0.51
NEDD4-202ENST00000435532 TNNI2P48788 182 aa18.25■□□□□ 0.51
NEDD4-202ENST00000435532 PARP10Q53GL7 1025 aa18.25■□□□□ 0.51
NEDD4-202ENST00000435532 CNBD1Q8NA66 436 aa18.25■□□□□ 0.51
NEDD4-202ENST00000435532 SBNO1A3KN83 1393 aa18.25■□□□□ 0.51
NEDD4-202ENST00000435532 GRM8O00222 908 aa18.25■□□□□ 0.51
NEDD4-202ENST00000435532 MFSD6Q6ZSS7 791 aa18.25■□□□□ 0.51
NEDD4-202ENST00000435532 TMEM87AQ8NBN3 555 aa18.25■□□□□ 0.51
NEDD4-202ENST00000435532 SPATA32Q96LK8 384 aa18.25■□□□□ 0.51
NEDD4-202ENST00000435532 ORAI2Q96SN7 254 aa18.25■□□□□ 0.51
NEDD4-202ENST00000435532 BRPF1P55201 1214 aaPredicted RBP18.25■□□□□ 0.51
NEDD4-202ENST00000435532 GSE1Q14687 1217 aa18.25■□□□□ 0.51
NEDD4-202ENST00000435532 SH2B1Q9NRF2 756 aaPredicted RBP18.25■□□□□ 0.51
NEDD4-202ENST00000435532 ARHGEF12Q9NZN5 1544 aa18.24■□□□□ 0.51
NEDD4-202ENST00000435532 IBSPP21815 317 aaPredicted RBP18.24■□□□□ 0.51
NEDD4-202ENST00000435532 ZRANB1Q9UGI0 708 aa18.24■□□□□ 0.51
NEDD4-202ENST00000435532 CCDC194A0A1B0GVG4 234 aa18.24■□□□□ 0.51
NEDD4-202ENST00000435532 FBLN1P23142 703 aa18.24■□□□□ 0.51
NEDD4-202ENST00000435532 CCDC184Q52MB2 194 aa18.24■□□□□ 0.51
NEDD4-202ENST00000435532 EYA1Q99502 592 aa18.24■□□□□ 0.51
NEDD4-202ENST00000435532 B4DLN1 442 aa18.23■□□□□ 0.51
NEDD4-202ENST00000435532 IRS4O14654 1257 aaPredicted RBP18.23■□□□□ 0.51
NEDD4-202ENST00000435532 MRPL12P52815 198 aaKnown RBP18.23■□□□□ 0.51
NEDD4-202ENST00000435532 TSPY26PQ9H489 355 aa18.23■□□□□ 0.51
NEDD4-202ENST00000435532 NLRP5P59047 1200 aa18.23■□□□□ 0.51
NEDD4-202ENST00000435532 CCDC87Q9NVE4 849 aa18.23■□□□□ 0.51
NEDD4-202ENST00000435532 MAGI2Q86UL8 1455 aa18.23■□□□□ 0.51
NEDD4-202ENST00000435532 COL17A1Q9UMD9 1497 aaPredicted RBP18.23■□□□□ 0.51
NEDD4-202ENST00000435532 POTEJP0CG39 1038 aa18.23■□□□□ 0.51
NEDD4-202ENST00000435532 TRIM27P14373 513 aa18.23■□□□□ 0.51
NEDD4-202ENST00000435532 CAGE1Q8TC20 777 aa18.23■□□□□ 0.51
NEDD4-202ENST00000435532 CYP7A1P22680 504 aa18.23■□□□□ 0.51
NEDD4-202ENST00000435532 TNMDQ9H2S6 317 aa18.23■□□□□ 0.51
NEDD4-202ENST00000435532 A0A1W2PP64 1363 aa18.23■□□□□ 0.51
NEDD4-202ENST00000435532 ANXA1P04083 346 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms