RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 GCKRQ14397 625 aa11.16□□□□□ -0.62
LINCMD1-201ENST00000418518 NBPF14Q5TI25 921 aa11.16□□□□□ -0.62
LINCMD1-201ENST00000418518 NBPF10Q6P3W6 841 aaKnown RBP11.16□□□□□ -0.62
LINCMD1-201ENST00000418518 ANKRD13DQ6ZTN6 518 aa11.16□□□□□ -0.62
LINCMD1-201ENST00000418518 NBPF15Q8N660 670 aa11.16□□□□□ -0.62
LINCMD1-201ENST00000418518 RHPN1Q8TCX5 695 aa11.16□□□□□ -0.62
LINCMD1-201ENST00000418518 SNX21Q969T3 373 aa11.16□□□□□ -0.62
LINCMD1-201ENST00000418518 SUCLG2Q96I99 432 aa11.16□□□□□ -0.62
LINCMD1-201ENST00000418518 C9orf78Q9NZ63 289 aaPredicted RBP11.16□□□□□ -0.62
LINCMD1-201ENST00000418518 THRAP3Q9Y2W1 955 aaKnown RBP11.16□□□□□ -0.62
LINCMD1-201ENST00000418518 NUP98P52948 1817 aa11.16□□□□□ -0.62
LINCMD1-201ENST00000418518 MYL6BP14649 208 aa11.15□□□□□ -0.62
LINCMD1-201ENST00000418518 ERC1Q8IUD2 1116 aa11.15□□□□□ -0.62
LINCMD1-201ENST00000418518 KIF2CQ99661 725 aa11.15□□□□□ -0.62
LINCMD1-201ENST00000418518 TBC1D2Q9BYX2 928 aa11.15□□□□□ -0.62
LINCMD1-201ENST00000418518 TMOD3Q9NYL9 352 aa11.15□□□□□ -0.62
LINCMD1-201ENST00000418518 DAXXQ9UER7 740 aaPredicted RBP11.15□□□□□ -0.62
LINCMD1-201ENST00000418518 COL5A3P25940 1745 aaPredicted RBP11.15□□□□□ -0.63
LINCMD1-201ENST00000418518 APBB1O00213 710 aa11.14□□□□□ -0.63
LINCMD1-201ENST00000418518 SURF6O75683 361 aaKnown RBP11.14□□□□□ -0.63
LINCMD1-201ENST00000418518 CASP7P55210 303 aa11.14□□□□□ -0.63
LINCMD1-201ENST00000418518 AIMP1Q12904 312 aaKnown RBP11.14□□□□□ -0.63
LINCMD1-201ENST00000418518 RABL6Q3YEC7 729 aaPredicted RBP11.14□□□□□ -0.63
LINCMD1-201ENST00000418518 DDX54Q8TDD1 881 aaKnown RBP11.14□□□□□ -0.63
LINCMD1-201ENST00000418518 MYD88Q99836 296 aa11.14□□□□□ -0.63
LINCMD1-201ENST00000418518 TEX13AQ9BXU3 409 aaPredicted RBP11.14□□□□□ -0.63
LINCMD1-201ENST00000418518 BICC1Q9H694 974 aaKnown RBP11.14□□□□□ -0.63
LINCMD1-201ENST00000418518 SPATA31A1Q5TZJ5 1347 aa11.13□□□□□ -0.63
LINCMD1-201ENST00000418518 TTC41PQ6P2S7 1318 aa11.13□□□□□ -0.63
LINCMD1-201ENST00000418518 EPB41L2O43491 1005 aaKnown RBP11.13□□□□□ -0.63
LINCMD1-201ENST00000418518 SLC4A3P48751 1232 aa11.13□□□□□ -0.63
LINCMD1-201ENST00000418518 CASC1Q6TDU7 716 aa11.13□□□□□ -0.63
LINCMD1-201ENST00000418518 PI4K2BQ8TCG2 481 aa11.13□□□□□ -0.63
LINCMD1-201ENST00000418518 USP26Q9BXU7 913 aa11.13□□□□□ -0.63
LINCMD1-201ENST00000418518 TOM1O60784 492 aa11.12□□□□□ -0.63
LINCMD1-201ENST00000418518 MYT1Q01538 1121 aa11.12□□□□□ -0.63
LINCMD1-201ENST00000418518 PIGBQ92521 554 aa11.12□□□□□ -0.63
LINCMD1-201ENST00000418518 IL17RAQ96F46 866 aa11.12□□□□□ -0.63
LINCMD1-201ENST00000418518 ANTXR1Q9H6X2 564 aa11.12□□□□□ -0.63
LINCMD1-201ENST00000418518 USP35Q9P2H5 1018 aa11.12□□□□□ -0.63
LINCMD1-201ENST00000418518 SPATA31A5Q5VU36 1347 aa11.11□□□□□ -0.63
LINCMD1-201ENST00000418518 SPATA31A7Q8IWB4 1347 aa11.11□□□□□ -0.63
LINCMD1-201ENST00000418518 THSD7AQ9UPZ6 1657 aa11.11□□□□□ -0.63
LINCMD1-201ENST00000418518 LAMB2P55268 1798 aa11.11□□□□□ -0.63
LINCMD1-201ENST00000418518 BCORQ6W2J9 1755 aa11.11□□□□□ -0.63
LINCMD1-201ENST00000418518 ERC2O15083 957 aa11.11□□□□□ -0.63
LINCMD1-201ENST00000418518 REC8O95072 547 aa11.11□□□□□ -0.63
LINCMD1-201ENST00000418518 BARGINQ6ZT62 677 aa11.11□□□□□ -0.63
LINCMD1-201ENST00000418518 COPRSQ9NQ92 184 aa11.11□□□□□ -0.63
LINCMD1-201ENST00000418518 ATG3Q9NT62 314 aa11.11□□□□□ -0.63
LINCMD1-201ENST00000418518 MYH14Q7Z406 1995 aaKnown RBP11.1□□□□□ -0.63
LINCMD1-201ENST00000418518 SPEF2Q9C093 1822 aa11.1□□□□□ -0.63
LINCMD1-201ENST00000418518 H7C1W4 665 aa11.1□□□□□ -0.63
LINCMD1-201ENST00000418518 EXOC5O00471 708 aa11.1□□□□□ -0.63
LINCMD1-201ENST00000418518 A1BGP04217 495 aa11.1□□□□□ -0.63
LINCMD1-201ENST00000418518 RFX5P48382 616 aaPredicted RBP11.1□□□□□ -0.63
LINCMD1-201ENST00000418518 PIP4K2AP48426 406 aaPredicted RBP11.1□□□□□ -0.63
LINCMD1-201ENST00000418518 TRIM28Q13263 835 aaKnown RBP11.1□□□□□ -0.63
LINCMD1-201ENST00000418518 EPHA10Q5JZY3 1008 aa11.1□□□□□ -0.63
LINCMD1-201ENST00000418518 TTLL7Q6ZT98 887 aa11.1□□□□□ -0.63
LINCMD1-201ENST00000418518 CCDC191Q8NCU4 936 aa11.1□□□□□ -0.63
LINCMD1-201ENST00000418518 ISCA1Q9BUE6 129 aa11.1□□□□□ -0.63
LINCMD1-201ENST00000418518 IL1RAPL2Q9NP60 686 aa11.1□□□□□ -0.63
LINCMD1-201ENST00000418518 PTCD1O75127 700 aaKnown RBP11.09□□□□□ -0.63
LINCMD1-201ENST00000418518 CHMLP26374 656 aa11.09□□□□□ -0.63
LINCMD1-201ENST00000418518 RABEP1Q15276 862 aa11.09□□□□□ -0.63
LINCMD1-201ENST00000418518 HSCBQ8IWL3 235 aa11.09□□□□□ -0.63
LINCMD1-201ENST00000418518 CLASRPQ8N2M8 674 aaKnown RBP11.09□□□□□ -0.63
LINCMD1-201ENST00000418518 ESYT1Q9BSJ8 1104 aa11.09□□□□□ -0.63
LINCMD1-201ENST00000418518 CWC25Q9NXE8 425 aaPredicted RBP11.09□□□□□ -0.63
LINCMD1-201ENST00000418518 ASAP1Q9ULH1 1129 aa11.09□□□□□ -0.63
LINCMD1-201ENST00000418518 PA2G4Q9UQ80 394 aaKnown RBP11.09□□□□□ -0.63
LINCMD1-201ENST00000418518 JCADQ9P266 1359 aa11.08□□□□□ -0.64
LINCMD1-201ENST00000418518 GLRX3O76003 335 aaKnown RBP11.08□□□□□ -0.64
LINCMD1-201ENST00000418518 SASH1O94885 1247 aa11.08□□□□□ -0.64
LINCMD1-201ENST00000418518 TSHZ3Q63HK5 1081 aa11.08□□□□□ -0.64
LINCMD1-201ENST00000418518 NUTM1Q86Y26 1132 aa11.08□□□□□ -0.64
LINCMD1-201ENST00000418518 DNAJC10Q8IXB1 793 aa11.08□□□□□ -0.64
LINCMD1-201ENST00000418518 LRP5O75197 1615 aa11.08□□□□□ -0.64
LINCMD1-201ENST00000418518 NHSQ6T4R5 1651 aa11.08□□□□□ -0.64
LINCMD1-201ENST00000418518 A0A087WZG4 1122 aa11.07□□□□□ -0.64
LINCMD1-201ENST00000418518 STARD3NLO95772 234 aa11.07□□□□□ -0.64
LINCMD1-201ENST00000418518 DDIT3P35638 169 aa11.07□□□□□ -0.64
LINCMD1-201ENST00000418518 FOXO4P98177 505 aa11.07□□□□□ -0.64
LINCMD1-201ENST00000418518 PTPN12Q05209 780 aaKnown RBP11.07□□□□□ -0.64
LINCMD1-201ENST00000418518 G3BP1Q13283 466 aaKnown RBP eCLIP11.07□□□□□ -0.64
LINCMD1-201ENST00000418518 OS9Q13438 667 aaPredicted RBP11.07□□□□□ -0.64
LINCMD1-201ENST00000418518 UBE3BQ7Z3V4 1068 aa11.07□□□□□ -0.64
LINCMD1-201ENST00000418518 UNC5CLQ8IV45 518 aa11.07□□□□□ -0.64
LINCMD1-201ENST00000418518 IL27Q8NEV9 243 aa11.07□□□□□ -0.64
LINCMD1-201ENST00000418518 GPATCH3Q96I76 525 aa11.07□□□□□ -0.64
LINCMD1-201ENST00000418518 SLC4A9Q96Q91 983 aa11.07□□□□□ -0.64
LINCMD1-201ENST00000418518 ECHDC1Q9NTX5 307 aa11.07□□□□□ -0.64
LINCMD1-201ENST00000418518 BCL9LQ86UU0 1499 aa11.06□□□□□ -0.64
LINCMD1-201ENST00000418518 CASZ1Q86V15 1759 aa11.06□□□□□ -0.64
LINCMD1-201ENST00000418518 ATP5J2-PTCD1G3V325 749 aa11.06□□□□□ -0.64
LINCMD1-201ENST00000418518 CYP19A1P11511 503 aaPredicted RBP11.06□□□□□ -0.64
LINCMD1-201ENST00000418518 ANAPC15P60006 121 aa11.06□□□□□ -0.64
LINCMD1-201ENST00000418518 TCIRG1Q13488 830 aa11.06□□□□□ -0.64
LINCMD1-201ENST00000418518 CNTROBQ8N137 903 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms