RNA–Protein interactions for RNA: ENST00000418454.2

HMGA1P6-201, Transcript of high mobility group AT-hook 1 pseudogene 6, humanhuman

BASIC

Gene HMGA1P6, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P6-201ENST00000418454 SLC4A9Q96Q91 983 aa12.64□□□□□ -0.39
HMGA1P6-201ENST00000418454 A0A0G2JS52 829 aa12.63□□□□□ -0.39
HMGA1P6-201ENST00000418454 GRM8O00222 908 aa12.63□□□□□ -0.39
HMGA1P6-201ENST00000418454 A1BGP04217 495 aa12.63□□□□□ -0.39
HMGA1P6-201ENST00000418454 EIF5P55010 431 aaKnown RBP12.63□□□□□ -0.39
HMGA1P6-201ENST00000418454 MYT1Q01538 1121 aa12.63□□□□□ -0.39
HMGA1P6-201ENST00000418454 KIF6Q6ZMV9 814 aa12.63□□□□□ -0.39
HMGA1P6-201ENST00000418454 MEIS3Q99687 375 aa12.63□□□□□ -0.39
HMGA1P6-201ENST00000418454 CCDC87Q9NVE4 849 aa12.63□□□□□ -0.39
HMGA1P6-201ENST00000418454 C9orf78Q9NZ63 289 aaPredicted RBP12.63□□□□□ -0.39
HMGA1P6-201ENST00000418454 CNTNAP4Q9C0A0 1308 aa12.62□□□□□ -0.39
HMGA1P6-201ENST00000418454 NHSQ6T4R5 1651 aa12.62□□□□□ -0.39
HMGA1P6-201ENST00000418454 NEURL1BA8MQ27 555 aa12.62□□□□□ -0.39
HMGA1P6-201ENST00000418454 AIMP1Q12904 312 aaKnown RBP12.62□□□□□ -0.39
HMGA1P6-201ENST00000418454 TCIRG1Q13488 830 aa12.62□□□□□ -0.39
HMGA1P6-201ENST00000418454 GCKRQ14397 625 aa12.62□□□□□ -0.39
HMGA1P6-201ENST00000418454 HSP90AB4PQ58FF6 505 aa12.62□□□□□ -0.39
HMGA1P6-201ENST00000418454 SLC27A3Q5K4L6 730 aa12.62□□□□□ -0.39
HMGA1P6-201ENST00000418454 CLEC4GQ6UXB4 293 aa12.62□□□□□ -0.39
HMGA1P6-201ENST00000418454 SIRT2Q8IXJ6 389 aa12.62□□□□□ -0.39
HMGA1P6-201ENST00000418454 ACSBG1Q96GR2 724 aa12.62□□□□□ -0.39
HMGA1P6-201ENST00000418454 MAP3K15Q6ZN16 1313 aa12.62□□□□□ -0.39
HMGA1P6-201ENST00000418454 KCNQ2O43526 872 aa12.61□□□□□ -0.39
HMGA1P6-201ENST00000418454 RAB11FIP3O75154 756 aa12.61□□□□□ -0.39
HMGA1P6-201ENST00000418454 ANXA1P04083 346 aa12.61□□□□□ -0.39
HMGA1P6-201ENST00000418454 IGKV5-2P06315 115 aa12.61□□□□□ -0.39
HMGA1P6-201ENST00000418454 HSP90B1P14625 803 aaKnown RBP12.61□□□□□ -0.39
HMGA1P6-201ENST00000418454 NUCB1Q02818 461 aa12.61□□□□□ -0.39
HMGA1P6-201ENST00000418454 INTS5Q6P9B9 1019 aaKnown RBP12.61□□□□□ -0.39
HMGA1P6-201ENST00000418454 GIGYF2Q6Y7W6 1299 aaKnown RBP12.61□□□□□ -0.39
HMGA1P6-201ENST00000418454 SSH3Q8TE77 659 aa12.61□□□□□ -0.39
HMGA1P6-201ENST00000418454 ISCA1Q9BUE6 129 aa12.61□□□□□ -0.39
HMGA1P6-201ENST00000418454 H7C1W4 665 aa12.6□□□□□ -0.39
HMGA1P6-201ENST00000418454 POLA2Q14181 598 aa12.6□□□□□ -0.39
HMGA1P6-201ENST00000418454 AK7Q96M32 723 aa12.6□□□□□ -0.39
HMGA1P6-201ENST00000418454 RREB1Q92766 1687 aa12.59□□□□□ -0.39
HMGA1P6-201ENST00000418454 PLSCR1O15162 318 aa12.59□□□□□ -0.39
HMGA1P6-201ENST00000418454 CWC25Q9NXE8 425 aaPredicted RBP12.59□□□□□ -0.39
HMGA1P6-201ENST00000418454 NOP58Q9Y2X3 529 aaKnown RBP12.59□□□□□ -0.39
HMGA1P6-201ENST00000418454 EIF5BO60841 1220 aaKnown RBP12.58□□□□□ -0.4
HMGA1P6-201ENST00000418454 NBPF7P0C2Y1 421 aaPredicted RBP12.58□□□□□ -0.4
HMGA1P6-201ENST00000418454 CRKLP46109 303 aaKnown RBP12.58□□□□□ -0.4
HMGA1P6-201ENST00000418454 CHD1LQ86WJ1 897 aa12.58□□□□□ -0.4
HMGA1P6-201ENST00000418454 MYD88Q99836 296 aa12.58□□□□□ -0.4
HMGA1P6-201ENST00000418454 ZBTB47Q9UFB7 747 aaPredicted RBP12.58□□□□□ -0.4
HMGA1P6-201ENST00000418454 TJP1Q07157 1748 aa12.57□□□□□ -0.4
HMGA1P6-201ENST00000418454 RPS6KA4O75676 772 aa12.57□□□□□ -0.4
HMGA1P6-201ENST00000418454 ADRA2BP18089 450 aa12.57□□□□□ -0.4
HMGA1P6-201ENST00000418454 ITPK1Q13572 414 aa12.57□□□□□ -0.4
HMGA1P6-201ENST00000418454 RABL6Q3YEC7 729 aaPredicted RBP12.57□□□□□ -0.4
HMGA1P6-201ENST00000418454 PARP10Q53GL7 1025 aa12.57□□□□□ -0.4
HMGA1P6-201ENST00000418454 TTLL7Q6ZT98 887 aa12.57□□□□□ -0.4
HMGA1P6-201ENST00000418454 PLA2G12BQ9BX93 195 aa12.57□□□□□ -0.4
HMGA1P6-201ENST00000418454 PDZRN3Q9UPQ7 1066 aa12.57□□□□□ -0.4
HMGA1P6-201ENST00000418454 ZNF652Q9Y2D9 606 aa12.57□□□□□ -0.4
HMGA1P6-201ENST00000418454 ZBTB1Q9Y2K1 713 aa12.57□□□□□ -0.4
HMGA1P6-201ENST00000418454 LRRFIP2Q9Y608 721 aaKnown RBP12.57□□□□□ -0.4
HMGA1P6-201ENST00000418454 PCCAP05165 728 aaPredicted RBP12.56□□□□□ -0.4
HMGA1P6-201ENST00000418454 CASP7P55210 303 aa12.56□□□□□ -0.4
HMGA1P6-201ENST00000418454 CWF19L2Q2TBE0 894 aaKnown RBP12.56□□□□□ -0.4
HMGA1P6-201ENST00000418454 DZIP3Q86Y13 1208 aaKnown RBP12.56□□□□□ -0.4
HMGA1P6-201ENST00000418454 ERC1Q8IUD2 1116 aa12.56□□□□□ -0.4
HMGA1P6-201ENST00000418454 ZBTB38Q8NAP3 1195 aaPredicted RBP12.56□□□□□ -0.4
HMGA1P6-201ENST00000418454 FBXO3Q9UK99 471 aa12.56□□□□□ -0.4
HMGA1P6-201ENST00000418454 CDHR2Q9BYE9 1310 aa12.56□□□□□ -0.4
HMGA1P6-201ENST00000418454 PPP1R42Q7Z4L9 355 aa12.55□□□□□ -0.4
HMGA1P6-201ENST00000418454 ZNF34Q8IZ26 560 aa12.55□□□□□ -0.4
HMGA1P6-201ENST00000418454 C1orf115Q9H7X2 142 aa12.55□□□□□ -0.4
HMGA1P6-201ENST00000418454 CCNL1Q9UK58 526 aaPredicted RBP12.55□□□□□ -0.4
HMGA1P6-201ENST00000418454 SRGAP3O43295 1099 aa12.54□□□□□ -0.4
HMGA1P6-201ENST00000418454 ANKRD45Q5TZF3 282 aa12.54□□□□□ -0.4
HMGA1P6-201ENST00000418454 OSBPL3Q9H4L5 887 aa12.54□□□□□ -0.4
HMGA1P6-201ENST00000418454 LY75O60449 1722 aa12.54□□□□□ -0.4
HMGA1P6-201ENST00000418454 SBF2Q86WG5 1849 aa12.53□□□□□ -0.4
HMGA1P6-201ENST00000418454 LINC00116Q8NCU8 138 aa12.53□□□□□ -0.4
HMGA1P6-201ENST00000418454 KAZALD1Q96I82 304 aa12.53□□□□□ -0.4
HMGA1P6-201ENST00000418454 ZBTB3Q9H5J0 574 aa12.53□□□□□ -0.4
HMGA1P6-201ENST00000418454 COPRSQ9NQ92 184 aa12.53□□□□□ -0.4
HMGA1P6-201ENST00000418454 RGS17Q9UGC6 210 aaPredicted RBP12.53□□□□□ -0.4
HMGA1P6-201ENST00000418454 NARFQ9UHQ1 456 aa12.53□□□□□ -0.4
HMGA1P6-201ENST00000418454 RTCBQ9Y3I0 505 aaKnown RBP12.53□□□□□ -0.4
HMGA1P6-201ENST00000418454 COL5A3P25940 1745 aaPredicted RBP12.53□□□□□ -0.4
HMGA1P6-201ENST00000418454 NUP188Q5SRE5 1749 aa12.53□□□□□ -0.4
HMGA1P6-201ENST00000418454 ARFGEF2Q9Y6D5 1785 aa12.53□□□□□ -0.4
HMGA1P6-201ENST00000418454 BTAF1O14981 1849 aa12.53□□□□□ -0.4
HMGA1P6-201ENST00000418454 PNMA6EA0A0J9YXQ4 647 aa12.52□□□□□ -0.41
HMGA1P6-201ENST00000418454 CAMTA2O94983 1202 aa12.52□□□□□ -0.41
HMGA1P6-201ENST00000418454 CSF1RP07333 972 aa12.52□□□□□ -0.41
HMGA1P6-201ENST00000418454 NLRP10Q86W26 655 aa12.52□□□□□ -0.41
HMGA1P6-201ENST00000418454 KIF1BPQ96EK5 621 aa12.52□□□□□ -0.41
HMGA1P6-201ENST00000418454 LRRCC1Q9C099 1032 aa12.52□□□□□ -0.41
HMGA1P6-201ENST00000418454 PIP4K2AP48426 406 aaPredicted RBP12.51□□□□□ -0.41
HMGA1P6-201ENST00000418454 FLAD1Q8NFF5 587 aa12.51□□□□□ -0.41
HMGA1P6-201ENST00000418454 SUCLG2Q96I99 432 aa12.51□□□□□ -0.41
HMGA1P6-201ENST00000418454 ATP5J2-PTCD1G3V325 749 aa12.5□□□□□ -0.41
HMGA1P6-201ENST00000418454 SSFA2P28290 1259 aa12.5□□□□□ -0.41
HMGA1P6-201ENST00000418454 FOXO4P98177 505 aa12.5□□□□□ -0.41
HMGA1P6-201ENST00000418454 FAM161AQ3B820 660 aa12.5□□□□□ -0.41
HMGA1P6-201ENST00000418454 TRAPPC3LQ5T215 181 aa12.5□□□□□ -0.41
HMGA1P6-201ENST00000418454 TICAM2Q86XR7 235 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms