RNA–Protein interactions for RNA: ENST00000414773.5

CLGN-202, Transcript of calmegin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLGN, Length 2,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLGN-202ENST00000414773 THSD7AQ9UPZ6 1657 aa13.68□□□□□ -0.22
CLGN-202ENST00000414773 ATP8B2P98198 1209 aa13.68□□□□□ -0.22
CLGN-202ENST00000414773 ATRNO75882 1429 aa13.67□□□□□ -0.22
CLGN-202ENST00000414773 NEURL1BA8MQ27 555 aa13.67□□□□□ -0.22
CLGN-202ENST00000414773 APBB1O00213 710 aa13.67□□□□□ -0.22
CLGN-202ENST00000414773 CYP19A1P11511 503 aaPredicted RBP13.67□□□□□ -0.22
CLGN-202ENST00000414773 ZBTB3Q9H5J0 574 aa13.67□□□□□ -0.22
CLGN-202ENST00000414773 QTRT2Q9H974 415 aaKnown RBP13.67□□□□□ -0.22
CLGN-202ENST00000414773 ATP5J2-PTCD1G3V325 749 aa13.66□□□□□ -0.22
CLGN-202ENST00000414773 GRM8O00222 908 aa13.66□□□□□ -0.22
CLGN-202ENST00000414773 BACH2Q9BYV9 841 aa13.66□□□□□ -0.22
CLGN-202ENST00000414773 ARFGEF2Q9Y6D5 1785 aa13.66□□□□□ -0.22
CLGN-202ENST00000414773 GCKRQ14397 625 aa13.65□□□□□ -0.22
CLGN-202ENST00000414773 PTF1AQ7RTS3 328 aa13.65□□□□□ -0.22
CLGN-202ENST00000414773 ARXQ96QS3 562 aa13.65□□□□□ -0.22
CLGN-202ENST00000414773 LOC102724428A0A0B4J2F2 783 aa13.65□□□□□ -0.22
CLGN-202ENST00000414773 ATP6V1AP38606 617 aa13.65□□□□□ -0.22
CLGN-202ENST00000414773 SIK1P57059 783 aa13.65□□□□□ -0.22
CLGN-202ENST00000414773 PPP1R42Q7Z4L9 355 aa13.65□□□□□ -0.22
CLGN-202ENST00000414773 EXOC6BQ9Y2D4 811 aa13.65□□□□□ -0.22
CLGN-202ENST00000414773 ZBTB1Q9Y2K1 713 aa13.65□□□□□ -0.22
CLGN-202ENST00000414773 PALLDQ8WX93 1383 aa13.65□□□□□ -0.22
CLGN-202ENST00000414773 TJP1Q07157 1748 aa13.65□□□□□ -0.22
CLGN-202ENST00000414773 SEPT12Q8IYM1 358 aa13.64□□□□□ -0.23
CLGN-202ENST00000414773 JARID2Q92833 1246 aaPredicted RBP13.64□□□□□ -0.23
CLGN-202ENST00000414773 SMARCA5O60264 1052 aaPredicted RBP13.64□□□□□ -0.23
CLGN-202ENST00000414773 FAM161AQ3B820 660 aa13.64□□□□□ -0.23
CLGN-202ENST00000414773 SRGAP3O43295 1099 aa13.63□□□□□ -0.23
CLGN-202ENST00000414773 ONECUT3O60422 494 aaPredicted RBP13.63□□□□□ -0.23
CLGN-202ENST00000414773 C8orf34Q49A92 452 aa13.63□□□□□ -0.23
CLGN-202ENST00000414773 SUCLG2Q96I99 432 aa13.63□□□□□ -0.23
CLGN-202ENST00000414773 UTYO14607 1347 aa13.63□□□□□ -0.23
CLGN-202ENST00000414773 ITPK1Q13572 414 aa13.63□□□□□ -0.23
CLGN-202ENST00000414773 SSH3Q8TE77 659 aa13.63□□□□□ -0.23
CLGN-202ENST00000414773 ZBTB47Q9UFB7 747 aaPredicted RBP13.63□□□□□ -0.23
CLGN-202ENST00000414773 SMARCC1Q92922 1105 aaPredicted RBP13.63□□□□□ -0.23
CLGN-202ENST00000414773 KAZALD1Q96I82 304 aa13.63□□□□□ -0.23
CLGN-202ENST00000414773 AFDNP55196 1824 aaKnown RBP13.62□□□□□ -0.23
CLGN-202ENST00000414773 NUP188Q5SRE5 1749 aa13.62□□□□□ -0.23
CLGN-202ENST00000414773 KIF6Q6ZMV9 814 aa13.62□□□□□ -0.23
CLGN-202ENST00000414773 C16orf71Q8IYS4 520 aaPredicted RBP13.62□□□□□ -0.23
CLGN-202ENST00000414773 POLA2Q14181 598 aa13.62□□□□□ -0.23
CLGN-202ENST00000414773 BICC1Q9H694 974 aaKnown RBP13.62□□□□□ -0.23
CLGN-202ENST00000414773 HDAC5Q9UQL6 1122 aa13.62□□□□□ -0.23
CLGN-202ENST00000414773 A0A087WZG4 1122 aa13.61□□□□□ -0.23
CLGN-202ENST00000414773 UBE3BQ7Z3V4 1068 aa13.61□□□□□ -0.23
CLGN-202ENST00000414773 CRKLP46109 303 aaKnown RBP13.6□□□□□ -0.23
CLGN-202ENST00000414773 KCNQ4P56696 695 aa13.6□□□□□ -0.23
CLGN-202ENST00000414773 INTS5Q6P9B9 1019 aaKnown RBP13.6□□□□□ -0.23
CLGN-202ENST00000414773 SURF6O75683 361 aaKnown RBP13.6□□□□□ -0.23
CLGN-202ENST00000414773 RTL5Q5HYW3 569 aaPredicted RBP13.6□□□□□ -0.23
CLGN-202ENST00000414773 OTUD7AQ8TE49 926 aaPredicted RBP13.6□□□□□ -0.23
CLGN-202ENST00000414773 CCDC87Q9NVE4 849 aa13.6□□□□□ -0.23
CLGN-202ENST00000414773 CWC25Q9NXE8 425 aaPredicted RBP13.6□□□□□ -0.23
CLGN-202ENST00000414773 IBTKQ9P2D0 1353 aaPredicted RBP13.6□□□□□ -0.23
CLGN-202ENST00000414773 IL6STP40189 918 aaPredicted RBP13.59□□□□□ -0.23
CLGN-202ENST00000414773 MTX1Q13505 466 aa13.59□□□□□ -0.23
CLGN-202ENST00000414773 EPHA10Q5JZY3 1008 aa13.59□□□□□ -0.23
CLGN-202ENST00000414773 MAP3K15Q6ZN16 1313 aa13.59□□□□□ -0.23
CLGN-202ENST00000414773 HLFQ16534 295 aa13.59□□□□□ -0.23
CLGN-202ENST00000414773 NPM2Q86SE8 214 aaKnown RBP13.59□□□□□ -0.23
CLGN-202ENST00000414773 TBC1D2BQ9UPU7 963 aa13.59□□□□□ -0.23
CLGN-202ENST00000414773 TCIRG1Q13488 830 aa13.59□□□□□ -0.23
CLGN-202ENST00000414773 LRRCC1Q9C099 1032 aa13.59□□□□□ -0.23
CLGN-202ENST00000414773 PLEKHM2Q8IWE5 1019 aa13.58□□□□□ -0.24
CLGN-202ENST00000414773 CCDC191Q8NCU4 936 aa13.58□□□□□ -0.24
CLGN-202ENST00000414773 BTAF1O14981 1849 aa13.58□□□□□ -0.24
CLGN-202ENST00000414773 NHSQ6T4R5 1651 aa13.58□□□□□ -0.24
CLGN-202ENST00000414773 CASP7P55210 303 aa13.58□□□□□ -0.24
CLGN-202ENST00000414773 DZIP3Q86Y13 1208 aaKnown RBP13.58□□□□□ -0.24
CLGN-202ENST00000414773 ISCA1Q9BUE6 129 aa13.58□□□□□ -0.24
CLGN-202ENST00000414773 PA2G4Q9UQ80 394 aaKnown RBP13.58□□□□□ -0.24
CLGN-202ENST00000414773 H7C1W4 665 aa13.57□□□□□ -0.24
CLGN-202ENST00000414773 EIF5P55010 431 aaKnown RBP13.57□□□□□ -0.24
CLGN-202ENST00000414773 GIGYF2Q6Y7W6 1299 aaKnown RBP13.57□□□□□ -0.24
CLGN-202ENST00000414773 LINC00116Q8NCU8 138 aa13.57□□□□□ -0.24
CLGN-202ENST00000414773 GPTP24298 496 aa13.56□□□□□ -0.24
CLGN-202ENST00000414773 IL1RAPL2Q9NP60 686 aa13.56□□□□□ -0.24
CLGN-202ENST00000414773 MYH14Q7Z406 1995 aaKnown RBP13.56□□□□□ -0.24
CLGN-202ENST00000414773 RAB11FIP3O75154 756 aa13.55□□□□□ -0.24
CLGN-202ENST00000414773 OS9Q13438 667 aaPredicted RBP13.55□□□□□ -0.24
CLGN-202ENST00000414773 ZNF772Q68DY9 489 aaPredicted RBP13.55□□□□□ -0.24
CLGN-202ENST00000414773 CICQ96RK0 1608 aaPredicted RBP13.55□□□□□ -0.24
CLGN-202ENST00000414773 KRT27Q7Z3Y8 459 aa13.55□□□□□ -0.24
CLGN-202ENST00000414773 SBF2Q86WG5 1849 aa13.55□□□□□ -0.24
CLGN-202ENST00000414773 SEC24BO95487 1268 aa13.54□□□□□ -0.24
CLGN-202ENST00000414773 BMP2KLQ5H9B9 411 aa13.54□□□□□ -0.24
CLGN-202ENST00000414773 KLHDC4Q8TBB5 520 aa13.54□□□□□ -0.24
CLGN-202ENST00000414773 RHPN1Q8TCX5 695 aa13.54□□□□□ -0.24
CLGN-202ENST00000414773 NOP58Q9Y2X3 529 aaKnown RBP13.54□□□□□ -0.24
CLGN-202ENST00000414773 COL5A3P25940 1745 aaPredicted RBP13.54□□□□□ -0.24
CLGN-202ENST00000414773 TRIM28Q13263 835 aaKnown RBP13.54□□□□□ -0.24
CLGN-202ENST00000414773 BRWD3Q6RI45 1802 aa13.54□□□□□ -0.24
CLGN-202ENST00000414773 RREB1Q92766 1687 aa13.54□□□□□ -0.24
CLGN-202ENST00000414773 ERVV-1B6SEH8 477 aa13.54□□□□□ -0.24
CLGN-202ENST00000414773 GSPT1P15170 499 aaKnown RBP13.54□□□□□ -0.24
CLGN-202ENST00000414773 RABL6Q3YEC7 729 aaPredicted RBP13.54□□□□□ -0.24
CLGN-202ENST00000414773 HSP90AB4PQ58FF6 505 aa13.54□□□□□ -0.24
CLGN-202ENST00000414773 HSP90AB3PQ58FF7 597 aa13.54□□□□□ -0.24
CLGN-202ENST00000414773 KIF1BPQ96EK5 621 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms