RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 ZBTB3Q9H5J0 574 aa15.61■□□□□ 0.09
CHMP3-204ENST00000409727 KCNQ4P56696 695 aa15.6■□□□□ 0.09
CHMP3-204ENST00000409727 ANKRD44Q8N8A2 993 aa15.6■□□□□ 0.09
CHMP3-204ENST00000409727 LINS1Q8NG48 757 aa15.6■□□□□ 0.09
CHMP3-204ENST00000409727 PLBD2Q8NHP8 589 aa15.6■□□□□ 0.09
CHMP3-204ENST00000409727 SMARCC1Q92922 1105 aaPredicted RBP15.6■□□□□ 0.09
CHMP3-204ENST00000409727 METTL22Q9BUU2 404 aaPredicted RBP15.6■□□□□ 0.09
CHMP3-204ENST00000409727 C9orf78Q9NZ63 289 aaPredicted RBP15.6■□□□□ 0.09
CHMP3-204ENST00000409727 PDZRN3Q9UPQ7 1066 aa15.6■□□□□ 0.09
CHMP3-204ENST00000409727 TJP1Q07157 1748 aa15.6■□□□□ 0.09
CHMP3-204ENST00000409727 ATP5J2-PTCD1G3V325 749 aa15.59■□□□□ 0.09
CHMP3-204ENST00000409727 IGKV5-2P06315 115 aa15.59■□□□□ 0.09
CHMP3-204ENST00000409727 ITPK1Q13572 414 aa15.59■□□□□ 0.09
CHMP3-204ENST00000409727 FBXO41Q8TF61 875 aa15.59■□□□□ 0.09
CHMP3-204ENST00000409727 BCL11AQ9H165 835 aa15.59■□□□□ 0.09
CHMP3-204ENST00000409727 ZBTB1Q9Y2K1 713 aa15.59■□□□□ 0.09
CHMP3-204ENST00000409727 ALDH1L1O75891 902 aa15.59■□□□□ 0.09
CHMP3-204ENST00000409727 RPAP2Q8IXW5 612 aaPredicted RBP15.59■□□□□ 0.09
CHMP3-204ENST00000409727 NEURL1BA8MQ27 555 aa15.57■□□□□ 0.08
CHMP3-204ENST00000409727 RBM6P78332 1123 aaKnown RBP15.57■□□□□ 0.08
CHMP3-204ENST00000409727 KRT27Q7Z3Y8 459 aa15.57■□□□□ 0.08
CHMP3-204ENST00000409727 SMC5Q8IY18 1101 aa15.57■□□□□ 0.08
CHMP3-204ENST00000409727 ARFGEF2Q9Y6D5 1785 aa15.57■□□□□ 0.08
CHMP3-204ENST00000409727 CRKLP46109 303 aaKnown RBP15.57■□□□□ 0.08
CHMP3-204ENST00000409727 KIF6Q6ZMV9 814 aa15.57■□□□□ 0.08
CHMP3-204ENST00000409727 JARID2Q92833 1246 aaPredicted RBP15.57■□□□□ 0.08
CHMP3-204ENST00000409727 NHSQ6T4R5 1651 aa15.56■□□□□ 0.08
CHMP3-204ENST00000409727 BTAF1O14981 1849 aa15.56■□□□□ 0.08
CHMP3-204ENST00000409727 APBB1O00213 710 aa15.56■□□□□ 0.08
CHMP3-204ENST00000409727 NPM2Q86SE8 214 aaKnown RBP15.56■□□□□ 0.08
CHMP3-204ENST00000409727 PNMA6EA0A0J9YXQ4 647 aa15.55■□□□□ 0.08
CHMP3-204ENST00000409727 GRM8O00222 908 aa15.55■□□□□ 0.08
CHMP3-204ENST00000409727 GCKRQ14397 625 aa15.55■□□□□ 0.08
CHMP3-204ENST00000409727 ANKRD45Q5TZF3 282 aa15.55■□□□□ 0.08
CHMP3-204ENST00000409727 GCC1Q96CN9 775 aa15.55■□□□□ 0.08
CHMP3-204ENST00000409727 CCDC87Q9NVE4 849 aa15.55■□□□□ 0.08
CHMP3-204ENST00000409727 BRWD3Q6RI45 1802 aa15.55■□□□□ 0.08
CHMP3-204ENST00000409727 HMMRO75330 724 aa15.54■□□□□ 0.08
CHMP3-204ENST00000409727 INTS5Q6P9B9 1019 aaKnown RBP15.54■□□□□ 0.08
CHMP3-204ENST00000409727 LNPKQ9C0E8 428 aa15.54■□□□□ 0.08
CHMP3-204ENST00000409727 ATP8B2P98198 1209 aa15.54■□□□□ 0.08
CHMP3-204ENST00000409727 TBC1D2BQ9UPU7 963 aa15.54■□□□□ 0.08
CHMP3-204ENST00000409727 NUP188Q5SRE5 1749 aa15.54■□□□□ 0.08
CHMP3-204ENST00000409727 AFDNP55196 1824 aaKnown RBP15.53■□□□□ 0.08
CHMP3-204ENST00000409727 NUCB1Q02818 461 aa15.53■□□□□ 0.08
CHMP3-204ENST00000409727 LINC00116Q8NCU8 138 aa15.53■□□□□ 0.08
CHMP3-204ENST00000409727 TSHZ2Q9NRE2 1034 aa15.53■□□□□ 0.08
CHMP3-204ENST00000409727 RXRBP28702 533 aa15.52■□□□□ 0.08
CHMP3-204ENST00000409727 IL6STP40189 918 aaPredicted RBP15.52■□□□□ 0.08
CHMP3-204ENST00000409727 RTL5Q5HYW3 569 aaPredicted RBP15.52■□□□□ 0.08
CHMP3-204ENST00000409727 FAM196AQ6ZSG2 479 aa15.52■□□□□ 0.08
CHMP3-204ENST00000409727 PPP1R42Q7Z4L9 355 aa15.52■□□□□ 0.08
CHMP3-204ENST00000409727 CHD1LQ86WJ1 897 aa15.52■□□□□ 0.08
CHMP3-204ENST00000409727 SUCLG2Q96I99 432 aa15.52■□□□□ 0.08
CHMP3-204ENST00000409727 DCTPP1Q9H773 170 aa15.52■□□□□ 0.08
CHMP3-204ENST00000409727 SBF2Q86WG5 1849 aa15.52■□□□□ 0.08
CHMP3-204ENST00000409727 A0A087WZG4 1122 aa15.52■□□□□ 0.07
CHMP3-204ENST00000409727 SRGAP3O43295 1099 aa15.52■□□□□ 0.07
CHMP3-204ENST00000409727 TRIM37O94972 964 aa15.52■□□□□ 0.07
CHMP3-204ENST00000409727 HLFQ16534 295 aa15.52■□□□□ 0.07
CHMP3-204ENST00000409727 UBE3BQ7Z3V4 1068 aa15.52■□□□□ 0.07
CHMP3-204ENST00000409727 DZIP3Q86Y13 1208 aaKnown RBP15.52■□□□□ 0.07
CHMP3-204ENST00000409727 CCNL1Q9UK58 526 aaPredicted RBP15.52■□□□□ 0.07
CHMP3-204ENST00000409727 MAP3K15Q6ZN16 1313 aa15.51■□□□□ 0.07
CHMP3-204ENST00000409727 DCAF8L1A6NGE4 600 aa15.51■□□□□ 0.07
CHMP3-204ENST00000409727 PDE4AP27815 886 aa15.51■□□□□ 0.07
CHMP3-204ENST00000409727 BCL11BQ9C0K0 894 aaPredicted RBP15.51■□□□□ 0.07
CHMP3-204ENST00000409727 EXOC6BQ9Y2D4 811 aa15.51■□□□□ 0.07
CHMP3-204ENST00000409727 BICC1Q9H694 974 aaKnown RBP15.5■□□□□ 0.07
CHMP3-204ENST00000409727 CWC25Q9NXE8 425 aaPredicted RBP15.5■□□□□ 0.07
CHMP3-204ENST00000409727 RGS17Q9UGC6 210 aaPredicted RBP15.5■□□□□ 0.07
CHMP3-204ENST00000409727 UTYO14607 1347 aa15.5■□□□□ 0.07
CHMP3-204ENST00000409727 GPTP24298 496 aa15.5■□□□□ 0.07
CHMP3-204ENST00000409727 EIF5P55010 431 aaKnown RBP15.5■□□□□ 0.07
CHMP3-204ENST00000409727 TCIRG1Q13488 830 aa15.5■□□□□ 0.07
CHMP3-204ENST00000409727 KAZALD1Q96I82 304 aa15.5■□□□□ 0.07
CHMP3-204ENST00000409727 SMARCA5O60264 1052 aaPredicted RBP15.49■□□□□ 0.07
CHMP3-204ENST00000409727 SMIM5Q71RC9 77 aa15.49■□□□□ 0.07
CHMP3-204ENST00000409727 ZBTB47Q9UFB7 747 aaPredicted RBP15.49■□□□□ 0.07
CHMP3-204ENST00000409727 HDAC5Q9UQL6 1122 aa15.49■□□□□ 0.07
CHMP3-204ENST00000409727 MYH14Q7Z406 1995 aaKnown RBP15.49■□□□□ 0.07
CHMP3-204ENST00000409727 COL5A3P25940 1745 aaPredicted RBP15.49■□□□□ 0.07
CHMP3-204ENST00000409727 POTEAQ6S8J7 498 aa15.48■□□□□ 0.07
CHMP3-204ENST00000409727 GIGYF2Q6Y7W6 1299 aaKnown RBP15.48■□□□□ 0.07
CHMP3-204ENST00000409727 CICQ96RK0 1608 aaPredicted RBP15.48■□□□□ 0.07
CHMP3-204ENST00000409727 EPHA10Q5JZY3 1008 aa15.48■□□□□ 0.07
CHMP3-204ENST00000409727 CCDC191Q8NCU4 936 aa15.48■□□□□ 0.07
CHMP3-204ENST00000409727 SSH3Q8TE77 659 aa15.48■□□□□ 0.07
CHMP3-204ENST00000409727 ISCA1Q9BUE6 129 aa15.47■□□□□ 0.07
CHMP3-204ENST00000409727 COL15A1P39059 1388 aa15.47■□□□□ 0.07
CHMP3-204ENST00000409727 EP400Q96L91 3159 aa15.47■□□□□ 0.07
CHMP3-204ENST00000409727 SURF6O75683 361 aaKnown RBP15.46■□□□□ 0.07
CHMP3-204ENST00000409727 POLA2Q14181 598 aa15.46■□□□□ 0.07
CHMP3-204ENST00000409727 RREB1Q92766 1687 aa15.46■□□□□ 0.07
CHMP3-204ENST00000409727 H7C1W4 665 aa15.46■□□□□ 0.06
CHMP3-204ENST00000409727 GNPATO15228 680 aa15.46■□□□□ 0.06
CHMP3-204ENST00000409727 C16orf71Q8IYS4 520 aaPredicted RBP15.46■□□□□ 0.06
CHMP3-204ENST00000409727 ZNF831Q5JPB2 1677 aa15.46■□□□□ 0.06
CHMP3-204ENST00000409727 CNTNAP4Q9C0A0 1308 aa15.46■□□□□ 0.06
CHMP3-204ENST00000409727 ERVV-1B6SEH8 477 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms