RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 ARHGEF10O15013 1369 aa19.23■□□□□ 0.67
COL4A3BP-204ENST00000405807 PNMA6EA0A0J9YXQ4 647 aa19.23■□□□□ 0.67
COL4A3BP-204ENST00000405807 ZSCAN22P10073 491 aaPredicted RBP19.23■□□□□ 0.67
COL4A3BP-204ENST00000405807 RAD51AP2Q09MP3 1159 aa19.23■□□□□ 0.67
COL4A3BP-204ENST00000405807 TTC12Q9H892 705 aaPredicted RBP19.23■□□□□ 0.67
COL4A3BP-204ENST00000405807 SPTLC3Q9NUV7 552 aa19.23■□□□□ 0.67
COL4A3BP-204ENST00000405807 ATP6V1DQ9Y5K8 247 aa19.23■□□□□ 0.67
COL4A3BP-204ENST00000405807 KDM4AO75164 1064 aa19.22■□□□□ 0.67
COL4A3BP-204ENST00000405807 CTR9Q6PD62 1173 aa19.22■□□□□ 0.67
COL4A3BP-204ENST00000405807 CNPY2Q9Y2B0 182 aa19.22■□□□□ 0.67
COL4A3BP-204ENST00000405807 RPAP1Q9BWH6 1393 aaPredicted RBP19.22■□□□□ 0.67
COL4A3BP-204ENST00000405807 HCLS1P14317 486 aaPredicted RBP19.22■□□□□ 0.67
COL4A3BP-204ENST00000405807 TXNDC2Q86VQ3 553 aa19.22■□□□□ 0.67
COL4A3BP-204ENST00000405807 UNC5CLQ8IV45 518 aa19.22■□□□□ 0.67
COL4A3BP-204ENST00000405807 MON2Q7Z3U7 1717 aa19.21■□□□□ 0.67
COL4A3BP-204ENST00000405807 RIMBP3CA6NJZ7 1639 aa19.21■□□□□ 0.67
COL4A3BP-204ENST00000405807 RIMBP3BA6NNM3 1639 aa19.21■□□□□ 0.67
COL4A3BP-204ENST00000405807 RIMBP3Q9UFD9 1639 aa19.21■□□□□ 0.67
COL4A3BP-204ENST00000405807 TOMM22Q9NS69 142 aa19.21■□□□□ 0.67
COL4A3BP-204ENST00000405807 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.21■□□□□ 0.67
COL4A3BP-204ENST00000405807 RASSF4Q9H2L5 321 aa19.21■□□□□ 0.67
COL4A3BP-204ENST00000405807 FKBP5Q13451 457 aaPredicted RBP19.2■□□□□ 0.66
COL4A3BP-204ENST00000405807 A2ML1A8K2U0 1454 aa19.2■□□□□ 0.66
COL4A3BP-204ENST00000405807 STX6O43752 255 aa19.2■□□□□ 0.66
COL4A3BP-204ENST00000405807 TTC21BQ7Z4L5 1316 aa19.2■□□□□ 0.66
COL4A3BP-204ENST00000405807 TPM3P06753 285 aa19.2■□□□□ 0.66
COL4A3BP-204ENST00000405807 GUCY2CP25092 1073 aa19.2■□□□□ 0.66
COL4A3BP-204ENST00000405807 HNRNPH2P55795 449 aaKnown RBP19.2■□□□□ 0.66
COL4A3BP-204ENST00000405807 FLIIQ13045 1269 aa19.2■□□□□ 0.66
COL4A3BP-204ENST00000405807 HSP90AB2PQ58FF8 381 aa19.2■□□□□ 0.66
COL4A3BP-204ENST00000405807 SLC26A8Q96RN1 970 aa19.2■□□□□ 0.66
COL4A3BP-204ENST00000405807 C3P01024 1663 aa19.19■□□□□ 0.66
COL4A3BP-204ENST00000405807 TUBGCP6Q96RT7 1819 aa19.19■□□□□ 0.66
COL4A3BP-204ENST00000405807 CCDC30Q5VVM6 783 aa19.19■□□□□ 0.66
COL4A3BP-204ENST00000405807 LIMCH1Q9UPQ0 1083 aa19.19■□□□□ 0.66
COL4A3BP-204ENST00000405807 RICTORQ6R327 1708 aa19.18■□□□□ 0.66
COL4A3BP-204ENST00000405807 SYT1P21579 422 aa19.18■□□□□ 0.66
COL4A3BP-204ENST00000405807 MTHFSDQ2M296 383 aaKnown RBP19.18■□□□□ 0.66
COL4A3BP-204ENST00000405807 SGSM3Q96HU1 749 aa19.18■□□□□ 0.66
COL4A3BP-204ENST00000405807 SMC3Q9UQE7 1217 aa19.18■□□□□ 0.66
COL4A3BP-204ENST00000405807 RAD50Q92878 1312 aa19.17■□□□□ 0.66
COL4A3BP-204ENST00000405807 F13A1P00488 732 aa19.17■□□□□ 0.66
COL4A3BP-204ENST00000405807 TNNT1P13805 278 aa19.17■□□□□ 0.66
COL4A3BP-204ENST00000405807 DNAJC21Q5F1R6 531 aaKnown RBP19.17■□□□□ 0.66
COL4A3BP-204ENST00000405807 TTC14Q96N46 770 aa19.17■□□□□ 0.66
COL4A3BP-204ENST00000405807 IL25Q9H293 177 aa19.17■□□□□ 0.66
COL4A3BP-204ENST00000405807 BRMS1Q9HCU9 246 aa19.17■□□□□ 0.66
COL4A3BP-204ENST00000405807 CTNNA3Q9UI47 895 aa19.17■□□□□ 0.66
COL4A3BP-204ENST00000405807 DDX41Q9UJV9 622 aaKnown RBP19.17■□□□□ 0.66
COL4A3BP-204ENST00000405807 SNX14Q9Y5W7 946 aa19.17■□□□□ 0.66
COL4A3BP-204ENST00000405807 LRRFIP2Q9Y608 721 aaKnown RBP19.17■□□□□ 0.66
COL4A3BP-204ENST00000405807 SETD1AO15047 1707 aaKnown RBP19.17■□□□□ 0.66
COL4A3BP-204ENST00000405807 RAB11FIP3O75154 756 aa19.17■□□□□ 0.66
COL4A3BP-204ENST00000405807 FOXO3O43524 673 aa19.16■□□□□ 0.66
COL4A3BP-204ENST00000405807 DONSONQ9NYP3 566 aa19.16■□□□□ 0.66
COL4A3BP-204ENST00000405807 METP08581 1390 aa19.16■□□□□ 0.66
COL4A3BP-204ENST00000405807 SGSM2O43147 1006 aa19.16■□□□□ 0.66
COL4A3BP-204ENST00000405807 AK2P54819 239 aa19.16■□□□□ 0.66
COL4A3BP-204ENST00000405807 C17orf53Q8N3J3 647 aaPredicted RBP19.16■□□□□ 0.66
COL4A3BP-204ENST00000405807 FUCA2Q9BTY2 467 aa19.15■□□□□ 0.66
COL4A3BP-204ENST00000405807 IL1RAPL2Q9NP60 686 aa19.15■□□□□ 0.66
COL4A3BP-204ENST00000405807 DIAPH3Q9NSV4 1193 aa19.15■□□□□ 0.66
COL4A3BP-204ENST00000405807 RAI14Q9P0K7 980 aa19.15■□□□□ 0.66
COL4A3BP-204ENST00000405807 SOS1Q07889 1333 aaPredicted RBP19.15■□□□□ 0.66
COL4A3BP-204ENST00000405807 AKAP12Q02952 1782 aa19.15■□□□□ 0.66
COL4A3BP-204ENST00000405807 GYS2P54840 703 aa19.15■□□□□ 0.66
COL4A3BP-204ENST00000405807 PLCB2Q00722 1185 aa19.15■□□□□ 0.66
COL4A3BP-204ENST00000405807 CHAF1AQ13111 956 aaPredicted RBP19.15■□□□□ 0.66
COL4A3BP-204ENST00000405807 PPP6R1Q9UPN7 881 aa19.15■□□□□ 0.66
COL4A3BP-204ENST00000405807 FIBPO43427 364 aa19.15■□□□□ 0.66
COL4A3BP-204ENST00000405807 UBTFL1P0CB47 393 aaPredicted RBP19.15■□□□□ 0.66
COL4A3BP-204ENST00000405807 NUTM1Q86Y26 1132 aa19.15■□□□□ 0.66
COL4A3BP-204ENST00000405807 MORC2Q9Y6X9 1032 aaPredicted RBP19.15■□□□□ 0.66
COL4A3BP-204ENST00000405807 PRR36Q9H6K5 1346 aa19.14■□□□□ 0.66
COL4A3BP-204ENST00000405807 GOLGA6L6A8MZA4 724 aa19.14■□□□□ 0.65
COL4A3BP-204ENST00000405807 KIAA1524Q8TCG1 905 aa19.14■□□□□ 0.65
COL4A3BP-204ENST00000405807 SSH3Q8TE77 659 aa19.14■□□□□ 0.65
COL4A3BP-204ENST00000405807 MAP3K19Q56UN5 1328 aa19.14■□□□□ 0.65
COL4A3BP-204ENST00000405807 TCHHQ07283 1943 aa19.14■□□□□ 0.65
COL4A3BP-204ENST00000405807 GIMAP6Q6P9H5 292 aa19.14■□□□□ 0.65
COL4A3BP-204ENST00000405807 RUFY3Q7L099 469 aa19.14■□□□□ 0.65
COL4A3BP-204ENST00000405807 ITSN1Q15811 1721 aa19.13■□□□□ 0.65
COL4A3BP-204ENST00000405807 CNTROBQ8N137 903 aa19.13■□□□□ 0.65
COL4A3BP-204ENST00000405807 LSG1Q9H089 658 aaKnown RBP19.13■□□□□ 0.65
COL4A3BP-204ENST00000405807 USP44Q9H0E7 712 aa19.13■□□□□ 0.65
COL4A3BP-204ENST00000405807 TDO2P48775 406 aa19.13■□□□□ 0.65
COL4A3BP-204ENST00000405807 OVOS2A0A0J9YW53 1432 aa19.12■□□□□ 0.65
COL4A3BP-204ENST00000405807 OVOS2Q6IE36 1432 aa19.12■□□□□ 0.65
COL4A3BP-204ENST00000405807 HTATSF1O43719 755 aaKnown RBP19.12■□□□□ 0.65
COL4A3BP-204ENST00000405807 PI4K2BQ8TCG2 481 aa19.12■□□□□ 0.65
COL4A3BP-204ENST00000405807 SURF6O75683 361 aaKnown RBP19.11■□□□□ 0.65
COL4A3BP-204ENST00000405807 MAP4K4O95819 1239 aaPredicted RBP19.11■□□□□ 0.65
COL4A3BP-204ENST00000405807 RASEFQ8IZ41 740 aa19.11■□□□□ 0.65
COL4A3BP-204ENST00000405807 SPATA31D1Q6ZQQ2 1576 aa19.11■□□□□ 0.65
COL4A3BP-204ENST00000405807 RGPD1P0DJD0 1748 aa19.11■□□□□ 0.65
COL4A3BP-204ENST00000405807 CCDC192P0DO97 292 aa19.11■□□□□ 0.65
COL4A3BP-204ENST00000405807 ACEP12821 1306 aa19.1■□□□□ 0.65
COL4A3BP-204ENST00000405807 KRT222Q8N1A0 295 aa19.1■□□□□ 0.65
COL4A3BP-204ENST00000405807 RHPN1Q8TCX5 695 aa19.1■□□□□ 0.65
COL4A3BP-204ENST00000405807 TECPR2O15040 1411 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms