RNA–Protein interactions for RNA: ENST00000395892.5

CLIC1-209, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLIC1, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-209ENST00000395892 POLA2Q14181 598 aa16.77■□□□□ 0.28
CLIC1-209ENST00000395892 CWF19L2Q2TBE0 894 aaKnown RBP16.76■□□□□ 0.27
CLIC1-209ENST00000395892 RIC3Q7Z5B4 369 aa16.76■□□□□ 0.27
CLIC1-209ENST00000395892 DNAJC10Q8IXB1 793 aa16.76■□□□□ 0.27
CLIC1-209ENST00000395892 SSH3Q8TE77 659 aa16.76■□□□□ 0.27
CLIC1-209ENST00000395892 TEX13AQ9BXU3 409 aaPredicted RBP16.76■□□□□ 0.27
CLIC1-209ENST00000395892 CCDC9Q9Y3X0 531 aaKnown RBP16.76■□□□□ 0.27
CLIC1-209ENST00000395892 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.76■□□□□ 0.27
CLIC1-209ENST00000395892 HMMRO75330 724 aa16.75■□□□□ 0.27
CLIC1-209ENST00000395892 PLBD2Q8NHP8 589 aa16.75■□□□□ 0.27
CLIC1-209ENST00000395892 KAZALD1Q96I82 304 aa16.75■□□□□ 0.27
CLIC1-209ENST00000395892 USP21Q9UK80 565 aa16.75■□□□□ 0.27
CLIC1-209ENST00000395892 DOT1LQ8TEK3 1739 aa16.74■□□□□ 0.27
CLIC1-209ENST00000395892 NEURL1BA8MQ27 555 aa16.74■□□□□ 0.27
CLIC1-209ENST00000395892 FAM98CQ17RN3 349 aaKnown RBP16.74■□□□□ 0.27
CLIC1-209ENST00000395892 TTLL7Q6ZT98 887 aa16.74■□□□□ 0.27
CLIC1-209ENST00000395892 MTX1Q13505 466 aa16.73■□□□□ 0.27
CLIC1-209ENST00000395892 PPP1R42Q7Z4L9 355 aa16.73■□□□□ 0.27
CLIC1-209ENST00000395892 C16orf71Q8IYS4 520 aaPredicted RBP16.73■□□□□ 0.27
CLIC1-209ENST00000395892 MYD88Q99836 296 aa16.73■□□□□ 0.27
CLIC1-209ENST00000395892 GRM8O00222 908 aa16.72■□□□□ 0.27
CLIC1-209ENST00000395892 CYP19A1P11511 503 aaPredicted RBP16.72■□□□□ 0.27
CLIC1-209ENST00000395892 GCKRQ14397 625 aa16.72■□□□□ 0.27
CLIC1-209ENST00000395892 PLEKHM2Q8IWE5 1019 aa16.72■□□□□ 0.27
CLIC1-209ENST00000395892 RBM42Q9BTD8 480 aaKnown RBP16.72■□□□□ 0.27
CLIC1-209ENST00000395892 ARFGEF2Q9Y6D5 1785 aa16.72■□□□□ 0.27
CLIC1-209ENST00000395892 KAT6BQ8WYB5 2073 aa16.71■□□□□ 0.27
CLIC1-209ENST00000395892 SMARCA5O60264 1052 aaPredicted RBP16.71■□□□□ 0.27
CLIC1-209ENST00000395892 ACSBG1Q96GR2 724 aa16.71■□□□□ 0.27
CLIC1-209ENST00000395892 SUCLG2Q96I99 432 aa16.71■□□□□ 0.27
CLIC1-209ENST00000395892 C9orf78Q9NZ63 289 aaPredicted RBP16.71■□□□□ 0.27
CLIC1-209ENST00000395892 NUP188Q5SRE5 1749 aa16.7■□□□□ 0.26
CLIC1-209ENST00000395892 ONECUT3O60422 494 aaPredicted RBP16.7■□□□□ 0.26
CLIC1-209ENST00000395892 SEC24BO95487 1268 aa16.7■□□□□ 0.26
CLIC1-209ENST00000395892 TJP1Q07157 1748 aa16.7■□□□□ 0.26
CLIC1-209ENST00000395892 THSD7AQ9UPZ6 1657 aa16.69■□□□□ 0.26
CLIC1-209ENST00000395892 STARD3NLO95772 234 aa16.69■□□□□ 0.26
CLIC1-209ENST00000395892 CASP7P55210 303 aa16.69■□□□□ 0.26
CLIC1-209ENST00000395892 NEXNQ0ZGT2 675 aa16.69■□□□□ 0.26
CLIC1-209ENST00000395892 SYTL4Q96C24 671 aaPredicted RBP16.69■□□□□ 0.26
CLIC1-209ENST00000395892 NOP58Q9Y2X3 529 aaKnown RBP16.69■□□□□ 0.26
CLIC1-209ENST00000395892 COL15A1P39059 1388 aa16.68■□□□□ 0.26
CLIC1-209ENST00000395892 KCNQ2O43526 872 aa16.68■□□□□ 0.26
CLIC1-209ENST00000395892 OTUD7AQ8TE49 926 aaPredicted RBP16.68■□□□□ 0.26
CLIC1-209ENST00000395892 GJD4Q96KN9 370 aaPredicted RBP16.68■□□□□ 0.26
CLIC1-209ENST00000395892 HDAC5Q9UQL6 1122 aa16.68■□□□□ 0.26
CLIC1-209ENST00000395892 EXOC6BQ9Y2D4 811 aa16.68■□□□□ 0.26
CLIC1-209ENST00000395892 AFF2P51816 1311 aa16.68■□□□□ 0.26
CLIC1-209ENST00000395892 SALL3Q9BXA9 1300 aa16.68■□□□□ 0.26
CLIC1-209ENST00000395892 ATP5J2-PTCD1G3V325 749 aa16.67■□□□□ 0.26
CLIC1-209ENST00000395892 H7C1W4 665 aa16.67■□□□□ 0.26
CLIC1-209ENST00000395892 BMP2KLQ5H9B9 411 aa16.67■□□□□ 0.26
CLIC1-209ENST00000395892 EPHA10Q5JZY3 1008 aa16.67■□□□□ 0.26
CLIC1-209ENST00000395892 ISCA1Q9BUE6 129 aa16.67■□□□□ 0.26
CLIC1-209ENST00000395892 ATRNO75882 1429 aa16.67■□□□□ 0.26
CLIC1-209ENST00000395892 SRGAP3O43295 1099 aa16.66■□□□□ 0.26
CLIC1-209ENST00000395892 RAB11FIP3O75154 756 aa16.66■□□□□ 0.26
CLIC1-209ENST00000395892 AFDNP55196 1824 aaKnown RBP16.66■□□□□ 0.26
CLIC1-209ENST00000395892 TRIM28Q13263 835 aaKnown RBP16.65■□□□□ 0.26
CLIC1-209ENST00000395892 MEX3CQ5U5Q3 659 aaKnown RBP16.65■□□□□ 0.26
CLIC1-209ENST00000395892 INTS5Q6P9B9 1019 aaKnown RBP16.65■□□□□ 0.26
CLIC1-209ENST00000395892 OSBPL3Q9H4L5 887 aa16.65■□□□□ 0.26
CLIC1-209ENST00000395892 BICC1Q9H694 974 aaKnown RBP16.65■□□□□ 0.26
CLIC1-209ENST00000395892 CICQ96RK0 1608 aaPredicted RBP16.65■□□□□ 0.26
CLIC1-209ENST00000395892 APBB1O00213 710 aa16.64■□□□□ 0.25
CLIC1-209ENST00000395892 SURF6O75683 361 aaKnown RBP16.64■□□□□ 0.25
CLIC1-209ENST00000395892 TCIRG1Q13488 830 aa16.64■□□□□ 0.25
CLIC1-209ENST00000395892 ITPK1Q13572 414 aa16.64■□□□□ 0.25
CLIC1-209ENST00000395892 PTF1AQ7RTS3 328 aa16.64■□□□□ 0.25
CLIC1-209ENST00000395892 JARID2Q92833 1246 aaPredicted RBP16.64■□□□□ 0.25
CLIC1-209ENST00000395892 LRRCC1Q9C099 1032 aa16.64■□□□□ 0.25
CLIC1-209ENST00000395892 ZBTB3Q9H5J0 574 aa16.64■□□□□ 0.25
CLIC1-209ENST00000395892 ZBTB1Q9Y2K1 713 aa16.64■□□□□ 0.25
CLIC1-209ENST00000395892 LOC102724428A0A0B4J2F2 783 aa16.63■□□□□ 0.25
CLIC1-209ENST00000395892 GSPT1P15170 499 aaKnown RBP16.63■□□□□ 0.25
CLIC1-209ENST00000395892 SIK1P57059 783 aa16.63■□□□□ 0.25
CLIC1-209ENST00000395892 RABL6Q3YEC7 729 aaPredicted RBP16.63■□□□□ 0.25
CLIC1-209ENST00000395892 CCDC191Q8NCU4 936 aa16.63■□□□□ 0.25
CLIC1-209ENST00000395892 SMARCC1Q92922 1105 aaPredicted RBP16.63■□□□□ 0.25
CLIC1-209ENST00000395892 RREB1Q92766 1687 aa16.62■□□□□ 0.25
CLIC1-209ENST00000395892 A0A087WZG4 1122 aa16.62■□□□□ 0.25
CLIC1-209ENST00000395892 IL6STP40189 918 aaPredicted RBP16.62■□□□□ 0.25
CLIC1-209ENST00000395892 RFX5P48382 616 aaPredicted RBP16.62■□□□□ 0.25
CLIC1-209ENST00000395892 EIF5P55010 431 aaKnown RBP16.62■□□□□ 0.25
CLIC1-209ENST00000395892 FOXO4P98177 505 aa16.62■□□□□ 0.25
CLIC1-209ENST00000395892 TTC22Q5TAA0 569 aa16.62■□□□□ 0.25
CLIC1-209ENST00000395892 RHPN1Q8TCX5 695 aa16.62■□□□□ 0.25
CLIC1-209ENST00000395892 FOXD4L1Q9NU39 408 aa16.62■□□□□ 0.25
CLIC1-209ENST00000395892 STAP2Q9UGK3 403 aa16.62■□□□□ 0.25
CLIC1-209ENST00000395892 TRPC5Q9UL62 973 aaPredicted RBP16.62■□□□□ 0.25
CLIC1-209ENST00000395892 MAP3K15Q6ZN16 1313 aa16.62■□□□□ 0.25
CLIC1-209ENST00000395892 ATP6V1AP38606 617 aa16.61■□□□□ 0.25
CLIC1-209ENST00000395892 PDE1AP54750 535 aa16.61■□□□□ 0.25
CLIC1-209ENST00000395892 HLFQ16534 295 aa16.61■□□□□ 0.25
CLIC1-209ENST00000395892 CWC25Q9NXE8 425 aaPredicted RBP16.61■□□□□ 0.25
CLIC1-209ENST00000395892 ZNF831Q5JPB2 1677 aa16.61■□□□□ 0.25
CLIC1-209ENST00000395892 PALLDQ8WX93 1383 aa16.61■□□□□ 0.25
CLIC1-209ENST00000395892 MYH14Q7Z406 1995 aaKnown RBP16.6■□□□□ 0.25
CLIC1-209ENST00000395892 GIGYF2Q6Y7W6 1299 aaKnown RBP16.6■□□□□ 0.25
CLIC1-209ENST00000395892 UBE3BQ7Z3V4 1068 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms