RNA–Protein interactions for RNA: ENST00000383801.6

SEC13-203, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2 BASIC

Gene SEC13, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-203ENST00000383801 NBPF14Q5TI25 921 aa16.73■□□□□ 0.27
SEC13-203ENST00000383801 NBPF10Q6P3W6 841 aaKnown RBP16.73■□□□□ 0.27
SEC13-203ENST00000383801 CASC1Q6TDU7 716 aa16.73■□□□□ 0.27
SEC13-203ENST00000383801 NBPF15Q8N660 670 aa16.73■□□□□ 0.27
SEC13-203ENST00000383801 PTCD1O75127 700 aaKnown RBP16.73■□□□□ 0.27
SEC13-203ENST00000383801 VPS72Q15906 364 aa16.73■□□□□ 0.27
SEC13-203ENST00000383801 FNBP4Q8N3X1 1017 aaPredicted RBP16.73■□□□□ 0.27
SEC13-203ENST00000383801 MYD88Q99836 296 aa16.73■□□□□ 0.27
SEC13-203ENST00000383801 DAXXQ9UER7 740 aaPredicted RBP16.73■□□□□ 0.27
SEC13-203ENST00000383801 TRIM28Q13263 835 aaKnown RBP16.72■□□□□ 0.27
SEC13-203ENST00000383801 BECN1Q14457 450 aa16.72■□□□□ 0.27
SEC13-203ENST00000383801 C16orf71Q8IYS4 520 aaPredicted RBP16.72■□□□□ 0.27
SEC13-203ENST00000383801 CCDC191Q8NCU4 936 aa16.72■□□□□ 0.27
SEC13-203ENST00000383801 RHPN1Q8TCX5 695 aa16.72■□□□□ 0.27
SEC13-203ENST00000383801 C22orf23Q9BZE7 217 aa16.72■□□□□ 0.27
SEC13-203ENST00000383801 NUTM2BA6NNL0 878 aaPredicted RBP16.71■□□□□ 0.27
SEC13-203ENST00000383801 NUTM2EB1AL46 878 aaPredicted RBP16.71■□□□□ 0.27
SEC13-203ENST00000383801 GSPT1P15170 499 aaKnown RBP16.71■□□□□ 0.27
SEC13-203ENST00000383801 MX1P20591 662 aa16.71■□□□□ 0.27
SEC13-203ENST00000383801 RBM25P49756 843 aaKnown RBP16.71■□□□□ 0.27
SEC13-203ENST00000383801 NUTM2AQ8IVF1 878 aaPredicted RBP16.71■□□□□ 0.27
SEC13-203ENST00000383801 ASAP1Q9ULH1 1129 aa16.71■□□□□ 0.27
SEC13-203ENST00000383801 SMARCA5O60264 1052 aaPredicted RBP16.7■□□□□ 0.26
SEC13-203ENST00000383801 A1BGP04217 495 aa16.7■□□□□ 0.26
SEC13-203ENST00000383801 RABL6Q3YEC7 729 aaPredicted RBP16.7■□□□□ 0.26
SEC13-203ENST00000383801 CERKQ8TCT0 537 aa16.7■□□□□ 0.26
SEC13-203ENST00000383801 SUCLG2Q96I99 432 aa16.7■□□□□ 0.26
SEC13-203ENST00000383801 NUP188Q5SRE5 1749 aa16.69■□□□□ 0.26
SEC13-203ENST00000383801 AFDNP55196 1824 aaKnown RBP16.69■□□□□ 0.26
SEC13-203ENST00000383801 H7C1W4 665 aa16.69■□□□□ 0.26
SEC13-203ENST00000383801 TBC1D9Q6ZT07 1266 aa16.69■□□□□ 0.26
SEC13-203ENST00000383801 KAZALD1Q96I82 304 aa16.69■□□□□ 0.26
SEC13-203ENST00000383801 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.69■□□□□ 0.26
SEC13-203ENST00000383801 TTC41PQ6P2S7 1318 aa16.69■□□□□ 0.26
SEC13-203ENST00000383801 USP42Q9H9J4 1324 aaKnown RBP16.69■□□□□ 0.26
SEC13-203ENST00000383801 HSP90AB3PQ58FF7 597 aa16.68■□□□□ 0.26
SEC13-203ENST00000383801 CLASRPQ8N2M8 674 aaKnown RBP16.68■□□□□ 0.26
SEC13-203ENST00000383801 SMARCC1Q92922 1105 aaPredicted RBP16.68■□□□□ 0.26
SEC13-203ENST00000383801 NGLY1Q96IV0 654 aa16.68■□□□□ 0.26
SEC13-203ENST00000383801 CWC25Q9NXE8 425 aaPredicted RBP16.68■□□□□ 0.26
SEC13-203ENST00000383801 CICQ96RK0 1608 aaPredicted RBP16.68■□□□□ 0.26
SEC13-203ENST00000383801 A0A087WZG4 1122 aa16.67■□□□□ 0.26
SEC13-203ENST00000383801 APBB1O00213 710 aa16.67■□□□□ 0.26
SEC13-203ENST00000383801 EPB41L2O43491 1005 aaKnown RBP16.67■□□□□ 0.26
SEC13-203ENST00000383801 SDSP20132 328 aa16.67■□□□□ 0.26
SEC13-203ENST00000383801 G3BP1Q13283 466 aaKnown RBP eCLIP16.67■□□□□ 0.262e-9■■■□□ 17.5
SEC13-203ENST00000383801 BICC1Q9H694 974 aaKnown RBP16.67■□□□□ 0.26
SEC13-203ENST00000383801 BCL9LQ86UU0 1499 aa16.67■□□□□ 0.26
SEC13-203ENST00000383801 PRIM1P49642 420 aaKnown RBP16.67■□□□□ 0.26
SEC13-203ENST00000383801 MFAP1P55081 439 aaKnown RBP16.67■□□□□ 0.26
SEC13-203ENST00000383801 CASP7P55210 303 aa16.67■□□□□ 0.26
SEC13-203ENST00000383801 TCIRG1Q13488 830 aa16.67■□□□□ 0.26
SEC13-203ENST00000383801 KIF6Q6ZMV9 814 aa16.67■□□□□ 0.26
SEC13-203ENST00000383801 DNAJC10Q8IXB1 793 aa16.67■□□□□ 0.26
SEC13-203ENST00000383801 IL27Q8NEV9 243 aa16.67■□□□□ 0.26
SEC13-203ENST00000383801 COPRSQ9NQ92 184 aa16.67■□□□□ 0.26
SEC13-203ENST00000383801 DOT1LQ8TEK3 1739 aa16.66■□□□□ 0.26
SEC13-203ENST00000383801 ZNF831Q5JPB2 1677 aa16.66■□□□□ 0.26
SEC13-203ENST00000383801 CYP19A1P11511 503 aaPredicted RBP16.66■□□□□ 0.26
SEC13-203ENST00000383801 IL6STP40189 918 aaPredicted RBP16.66■□□□□ 0.26
SEC13-203ENST00000383801 MARCH10Q8NA82 808 aaPredicted RBP16.66■□□□□ 0.26
SEC13-203ENST00000383801 OTUD7AQ8TE49 926 aaPredicted RBP16.66■□□□□ 0.26
SEC13-203ENST00000383801 RBM42Q9BTD8 480 aaKnown RBP16.66■□□□□ 0.26
SEC13-203ENST00000383801 ISCA1Q9BUE6 129 aa16.66■□□□□ 0.26
SEC13-203ENST00000383801 CCDC9Q9Y3X0 531 aaKnown RBP16.66■□□□□ 0.26
SEC13-203ENST00000383801 ERVV-1B6SEH8 477 aa16.65■□□□□ 0.26
SEC13-203ENST00000383801 ERC2O15083 957 aa16.65■□□□□ 0.26
SEC13-203ENST00000383801 OS9Q13438 667 aaPredicted RBP16.65■□□□□ 0.26
SEC13-203ENST00000383801 AEBP2Q6ZN18 517 aaPredicted RBP16.65■□□□□ 0.26
SEC13-203ENST00000383801 TTLL7Q6ZT98 887 aa16.65■□□□□ 0.26
SEC13-203ENST00000383801 GPATCH3Q96I76 525 aa16.65■□□□□ 0.26
SEC13-203ENST00000383801 REC8O95072 547 aa16.64■□□□□ 0.25
SEC13-203ENST00000383801 GIGYF2Q6Y7W6 1299 aaKnown RBP16.64■□□□□ 0.25
SEC13-203ENST00000383801 MAP3K15Q6ZN16 1313 aa16.64■□□□□ 0.25
SEC13-203ENST00000383801 TUBGCP6Q96RT7 1819 aa16.63■□□□□ 0.25
SEC13-203ENST00000383801 PIP4K2AP48426 406 aaPredicted RBP16.63■□□□□ 0.25
SEC13-203ENST00000383801 UBE3BQ7Z3V4 1068 aa16.63■□□□□ 0.25
SEC13-203ENST00000383801 SYTL4Q96C24 671 aaPredicted RBP16.63■□□□□ 0.25
SEC13-203ENST00000383801 FBXO3Q9UK99 471 aa16.63■□□□□ 0.25
SEC13-203ENST00000383801 GLRX3O76003 335 aaKnown RBP16.62■□□□□ 0.25
SEC13-203ENST00000383801 C8orf37Q96NL8 207 aa16.62■□□□□ 0.25
SEC13-203ENST00000383801 PLA2G12BQ9BX93 195 aa16.62■□□□□ 0.25
SEC13-203ENST00000383801 ATP5J2-PTCD1G3V325 749 aa16.61■□□□□ 0.25
SEC13-203ENST00000383801 IL1RAPL2Q9NP60 686 aa16.61■□□□□ 0.25
SEC13-203ENST00000383801 RGL2O15211 777 aa16.61■□□□□ 0.25
SEC13-203ENST00000383801 PCCAP05165 728 aaPredicted RBP16.61■□□□□ 0.25
SEC13-203ENST00000383801 RFX5P48382 616 aaPredicted RBP16.61■□□□□ 0.25
SEC13-203ENST00000383801 TJP1Q07157 1748 aa16.61■□□□□ 0.25
SEC13-203ENST00000383801 SNX21Q969T3 373 aa16.61■□□□□ 0.25
SEC13-203ENST00000383801 SLC4A9Q96Q91 983 aa16.61■□□□□ 0.25
SEC13-203ENST00000383801 USP21Q9UK80 565 aa16.61■□□□□ 0.25
SEC13-203ENST00000383801 KAT6BQ8WYB5 2073 aa16.6■□□□□ 0.25
SEC13-203ENST00000383801 IFIT2P09913 472 aaKnown RBP16.6■□□□□ 0.25
SEC13-203ENST00000383801 FOXO4P98177 505 aa16.6■□□□□ 0.25
SEC13-203ENST00000383801 PTPN12Q05209 780 aaKnown RBP16.6■□□□□ 0.25
SEC13-203ENST00000383801 TICAM2Q86XR7 235 aa16.6■□□□□ 0.25
SEC13-203ENST00000383801 CNTROBQ8N137 903 aa16.6■□□□□ 0.25
SEC13-203ENST00000383801 PI4K2BQ8TCG2 481 aa16.6■□□□□ 0.25
SEC13-203ENST00000383801 ANP32EQ9BTT0 268 aa16.6■□□□□ 0.25
SEC13-203ENST00000383801 ZBTB3Q9H5J0 574 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms