RNA–Protein interactions for RNA: ENST00000381108.3

FAM239A-201, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 2 BASIC

Gene FAM239A, Length 2,198 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-201ENST00000381108 VSIG10Q8N0Z9 540 aa13.65□□□□□ -0.22
FAM239A-201ENST00000381108 C9orf78Q9NZ63 289 aaPredicted RBP13.65□□□□□ -0.22
FAM239A-201ENST00000381108 PNMA6EA0A0J9YXQ4 647 aa13.64□□□□□ -0.23
FAM239A-201ENST00000381108 HMMRO75330 724 aa13.64□□□□□ -0.23
FAM239A-201ENST00000381108 FAM161AQ3B820 660 aa13.64□□□□□ -0.23
FAM239A-201ENST00000381108 MYD88Q99836 296 aa13.64□□□□□ -0.23
FAM239A-201ENST00000381108 DCTPP1Q9H773 170 aa13.64□□□□□ -0.23
FAM239A-201ENST00000381108 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.64□□□□□ -0.23
FAM239A-201ENST00000381108 NEXNQ0ZGT2 675 aa13.64□□□□□ -0.23
FAM239A-201ENST00000381108 C8orf34Q49A92 452 aa13.64□□□□□ -0.23
FAM239A-201ENST00000381108 IGKV5-2P06315 115 aa13.63□□□□□ -0.23
FAM239A-201ENST00000381108 LINS1Q8NG48 757 aa13.63□□□□□ -0.23
FAM239A-201ENST00000381108 NOP58Q9Y2X3 529 aaKnown RBP13.63□□□□□ -0.23
FAM239A-201ENST00000381108 AFF2P51816 1311 aa13.63□□□□□ -0.23
FAM239A-201ENST00000381108 ERBB4Q15303 1308 aa13.63□□□□□ -0.23
FAM239A-201ENST00000381108 AFDNP55196 1824 aaKnown RBP13.63□□□□□ -0.23
FAM239A-201ENST00000381108 ALDH1L1O75891 902 aa13.62□□□□□ -0.23
FAM239A-201ENST00000381108 TTLL7Q6ZT98 887 aa13.62□□□□□ -0.23
FAM239A-201ENST00000381108 IPO9Q96P70 1041 aaKnown RBP13.62□□□□□ -0.23
FAM239A-201ENST00000381108 SLC4A9Q96Q91 983 aa13.62□□□□□ -0.23
FAM239A-201ENST00000381108 EXOC6BQ9Y2D4 811 aa13.62□□□□□ -0.23
FAM239A-201ENST00000381108 METTL22Q9BUU2 404 aaPredicted RBP13.62□□□□□ -0.23
FAM239A-201ENST00000381108 ATP5J2-PTCD1G3V325 749 aa13.61□□□□□ -0.23
FAM239A-201ENST00000381108 KCNQ2O43526 872 aa13.61□□□□□ -0.23
FAM239A-201ENST00000381108 SMARCA5O60264 1052 aaPredicted RBP13.61□□□□□ -0.23
FAM239A-201ENST00000381108 ZBTB3Q9H5J0 574 aa13.61□□□□□ -0.23
FAM239A-201ENST00000381108 ZBTB47Q9UFB7 747 aaPredicted RBP13.61□□□□□ -0.23
FAM239A-201ENST00000381108 NEURL1BA8MQ27 555 aa13.61□□□□□ -0.23
FAM239A-201ENST00000381108 GRM8O00222 908 aa13.61□□□□□ -0.23
FAM239A-201ENST00000381108 STARD3NLO95772 234 aa13.61□□□□□ -0.23
FAM239A-201ENST00000381108 ATP8B2P98198 1209 aa13.61□□□□□ -0.23
FAM239A-201ENST00000381108 PPP1R42Q7Z4L9 355 aa13.61□□□□□ -0.23
FAM239A-201ENST00000381108 NPM2Q86SE8 214 aaKnown RBP13.61□□□□□ -0.23
FAM239A-201ENST00000381108 ARXQ96QS3 562 aa13.61□□□□□ -0.23
FAM239A-201ENST00000381108 SRGAP3O43295 1099 aa13.6□□□□□ -0.23
FAM239A-201ENST00000381108 FAM182BQ5T319 152 aa13.6□□□□□ -0.23
FAM239A-201ENST00000381108 PLBD2Q8NHP8 589 aa13.6□□□□□ -0.23
FAM239A-201ENST00000381108 NUP188Q5SRE5 1749 aa13.6□□□□□ -0.23
FAM239A-201ENST00000381108 JARID2Q92833 1246 aaPredicted RBP13.59□□□□□ -0.23
FAM239A-201ENST00000381108 TEX13AQ9BXU3 409 aaPredicted RBP13.59□□□□□ -0.23
FAM239A-201ENST00000381108 TJP1Q07157 1748 aa13.59□□□□□ -0.23
FAM239A-201ENST00000381108 GCKRQ14397 625 aa13.59□□□□□ -0.23
FAM239A-201ENST00000381108 GJD4Q96KN9 370 aaPredicted RBP13.59□□□□□ -0.23
FAM239A-201ENST00000381108 THSD7AQ9UPZ6 1657 aa13.58□□□□□ -0.24
FAM239A-201ENST00000381108 C16orf71Q8IYS4 520 aaPredicted RBP13.58□□□□□ -0.24
FAM239A-201ENST00000381108 SUCLG2Q96I99 432 aa13.58□□□□□ -0.24
FAM239A-201ENST00000381108 CYP19A1P11511 503 aaPredicted RBP13.58□□□□□ -0.24
FAM239A-201ENST00000381108 HOXD11P31277 338 aaPredicted RBP13.57□□□□□ -0.24
FAM239A-201ENST00000381108 OTUD7AQ8TE49 926 aaPredicted RBP13.57□□□□□ -0.24
FAM239A-201ENST00000381108 ZBTB1Q9Y2K1 713 aa13.57□□□□□ -0.24
FAM239A-201ENST00000381108 PALLDQ8WX93 1383 aa13.57□□□□□ -0.24
FAM239A-201ENST00000381108 ATP6V1AP38606 617 aa13.56□□□□□ -0.24
FAM239A-201ENST00000381108 RTL5Q5HYW3 569 aaPredicted RBP13.56□□□□□ -0.24
FAM239A-201ENST00000381108 UBE3BQ7Z3V4 1068 aa13.56□□□□□ -0.24
FAM239A-201ENST00000381108 SSH3Q8TE77 659 aa13.56□□□□□ -0.24
FAM239A-201ENST00000381108 BICC1Q9H694 974 aaKnown RBP13.56□□□□□ -0.24
FAM239A-201ENST00000381108 LOC102724428A0A0B4J2F2 783 aa13.56□□□□□ -0.24
FAM239A-201ENST00000381108 SIK1P57059 783 aa13.56□□□□□ -0.24
FAM239A-201ENST00000381108 PTF1AQ7RTS3 328 aa13.56□□□□□ -0.24
FAM239A-201ENST00000381108 TRPC5Q9UL62 973 aaPredicted RBP13.56□□□□□ -0.24
FAM239A-201ENST00000381108 UTYO14607 1347 aa13.56□□□□□ -0.24
FAM239A-201ENST00000381108 A0A087WZG4 1122 aa13.55□□□□□ -0.24
FAM239A-201ENST00000381108 SURF6O75683 361 aaKnown RBP13.55□□□□□ -0.24
FAM239A-201ENST00000381108 ATRNO75882 1429 aa13.55□□□□□ -0.24
FAM239A-201ENST00000381108 KIF6Q6ZMV9 814 aa13.55□□□□□ -0.24
FAM239A-201ENST00000381108 KAZALD1Q96I82 304 aa13.55□□□□□ -0.24
FAM239A-201ENST00000381108 LRRCC1Q9C099 1032 aa13.55□□□□□ -0.24
FAM239A-201ENST00000381108 IBTKQ9P2D0 1353 aaPredicted RBP13.55□□□□□ -0.24
FAM239A-201ENST00000381108 POLA2Q14181 598 aa13.55□□□□□ -0.24
FAM239A-201ENST00000381108 SEC24BO95487 1268 aa13.54□□□□□ -0.24
FAM239A-201ENST00000381108 PLEKHM2Q8IWE5 1019 aa13.54□□□□□ -0.24
FAM239A-201ENST00000381108 HDAC5Q9UQL6 1122 aa13.54□□□□□ -0.24
FAM239A-201ENST00000381108 ITPK1Q13572 414 aa13.54□□□□□ -0.24
FAM239A-201ENST00000381108 EPHA10Q5JZY3 1008 aa13.54□□□□□ -0.24
FAM239A-201ENST00000381108 DDRGK1Q96HY6 314 aa13.54□□□□□ -0.24
FAM239A-201ENST00000381108 QTRT2Q9H974 415 aaKnown RBP13.54□□□□□ -0.24
FAM239A-201ENST00000381108 IL1RAPL2Q9NP60 686 aa13.54□□□□□ -0.24
FAM239A-201ENST00000381108 KCNQ4P56696 695 aa13.53□□□□□ -0.24
FAM239A-201ENST00000381108 CWC25Q9NXE8 425 aaPredicted RBP13.53□□□□□ -0.24
FAM239A-201ENST00000381108 PA2G4Q9UQ80 394 aaKnown RBP13.53□□□□□ -0.24
FAM239A-201ENST00000381108 CRKLP46109 303 aaKnown RBP13.52□□□□□ -0.24
FAM239A-201ENST00000381108 OS9Q13438 667 aaPredicted RBP13.52□□□□□ -0.24
FAM239A-201ENST00000381108 MTX1Q13505 466 aa13.52□□□□□ -0.24
FAM239A-201ENST00000381108 SEPT12Q8IYM1 358 aa13.52□□□□□ -0.24
FAM239A-201ENST00000381108 BTAF1O14981 1849 aa13.52□□□□□ -0.25
FAM239A-201ENST00000381108 BMP2KLQ5H9B9 411 aa13.52□□□□□ -0.25
FAM239A-201ENST00000381108 TSHZ3Q63HK5 1081 aa13.52□□□□□ -0.25
FAM239A-201ENST00000381108 SMARCC1Q92922 1105 aaPredicted RBP13.52□□□□□ -0.25
FAM239A-201ENST00000381108 TBC1D2BQ9UPU7 963 aa13.52□□□□□ -0.25
FAM239A-201ENST00000381108 MAP3K15Q6ZN16 1313 aa13.52□□□□□ -0.25
FAM239A-201ENST00000381108 GSPT1P15170 499 aaKnown RBP13.51□□□□□ -0.25
FAM239A-201ENST00000381108 HLFQ16534 295 aa13.51□□□□□ -0.25
FAM239A-201ENST00000381108 NHSQ6T4R5 1651 aa13.51□□□□□ -0.25
FAM239A-201ENST00000381108 DZIP3Q86Y13 1208 aaKnown RBP13.51□□□□□ -0.25
FAM239A-201ENST00000381108 KLHDC4Q8TBB5 520 aa13.51□□□□□ -0.25
FAM239A-201ENST00000381108 SIL1Q9H173 461 aa13.51□□□□□ -0.25
FAM239A-201ENST00000381108 CCDC87Q9NVE4 849 aa13.51□□□□□ -0.25
FAM239A-201ENST00000381108 MYH14Q7Z406 1995 aaKnown RBP13.5□□□□□ -0.25
FAM239A-201ENST00000381108 GPTP24298 496 aa13.5□□□□□ -0.25
FAM239A-201ENST00000381108 IL6STP40189 918 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms