RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 TEX13AQ9BXU3 409 aaPredicted RBP21.92■■□□□ 1.1
CTTN-203ENST00000376561 LRRCC1Q9C099 1032 aa21.92■■□□□ 1.1
CTTN-203ENST00000376561 BCL9LQ86UU0 1499 aa21.91■■□□□ 1.1
CTTN-203ENST00000376561 GCKRQ14397 625 aa21.91■■□□□ 1.1
CTTN-203ENST00000376561 SPATA31A6Q5VVP1 1343 aa21.91■■□□□ 1.1
CTTN-203ENST00000376561 PRIM1P49642 420 aaKnown RBP21.91■■□□□ 1.1
CTTN-203ENST00000376561 RBM42Q9BTD8 480 aaKnown RBP21.91■■□□□ 1.1
CTTN-203ENST00000376561 AFDNP55196 1824 aaKnown RBP21.9■■□□□ 1.1
CTTN-203ENST00000376561 DNAJC10Q8IXB1 793 aa21.9■■□□□ 1.1
CTTN-203ENST00000376561 MARCH10Q8NA82 808 aaPredicted RBP21.9■■□□□ 1.1
CTTN-203ENST00000376561 GSPT1P15170 499 aaKnown RBP21.89■■□□□ 1.09
CTTN-203ENST00000376561 TTLL7Q6ZT98 887 aa21.89■■□□□ 1.09
CTTN-203ENST00000376561 KAZALD1Q96I82 304 aa21.89■■□□□ 1.09
CTTN-203ENST00000376561 SUCLG2Q96I99 432 aa21.89■■□□□ 1.09
CTTN-203ENST00000376561 NUP188Q5SRE5 1749 aa21.89■■□□□ 1.09
CTTN-203ENST00000376561 SURF6O75683 361 aaKnown RBP21.88■■□□□ 1.09
CTTN-203ENST00000376561 VPS72Q15906 364 aa21.88■■□□□ 1.09
CTTN-203ENST00000376561 TTC22Q5TAA0 569 aa21.88■■□□□ 1.09
CTTN-203ENST00000376561 FNBP4Q8N3X1 1017 aaPredicted RBP21.88■■□□□ 1.09
CTTN-203ENST00000376561 UPF2Q9HAU5 1272 aaKnown RBP21.88■■□□□ 1.09
CTTN-203ENST00000376561 RAB11FIP3O75154 756 aa21.87■■□□□ 1.09
CTTN-203ENST00000376561 STARD3NLO95772 234 aa21.87■■□□□ 1.09
CTTN-203ENST00000376561 SLC4A9Q96Q91 983 aa21.86■■□□□ 1.09
CTTN-203ENST00000376561 BICC1Q9H694 974 aaKnown RBP21.86■■□□□ 1.09
CTTN-203ENST00000376561 ATP5J2-PTCD1G3V325 749 aa21.86■■□□□ 1.09
CTTN-203ENST00000376561 FAM98CQ17RN3 349 aaKnown RBP21.86■■□□□ 1.09
CTTN-203ENST00000376561 DDRGK1Q96HY6 314 aa21.86■■□□□ 1.09
CTTN-203ENST00000376561 OSBPL3Q9H4L5 887 aa21.86■■□□□ 1.09
CTTN-203ENST00000376561 SALL3Q9BXA9 1300 aa21.85■■□□□ 1.09
CTTN-203ENST00000376561 PDE1AP54750 535 aa21.84■■□□□ 1.09
CTTN-203ENST00000376561 NOP58Q9Y2X3 529 aaKnown RBP21.84■■□□□ 1.09
CTTN-203ENST00000376561 HSP90AB4PQ58FF6 505 aa21.84■■□□□ 1.09
CTTN-203ENST00000376561 ACSBG1Q96GR2 724 aa21.84■■□□□ 1.09
CTTN-203ENST00000376561 RHPN1Q8TCX5 695 aa21.83■■□□□ 1.09
CTTN-203ENST00000376561 TBC1D32Q96NH3 1257 aa21.83■■□□□ 1.09
CTTN-203ENST00000376561 ZBTB3Q9H5J0 574 aa21.83■■□□□ 1.09
CTTN-203ENST00000376561 MFAP1P55081 439 aaKnown RBP21.83■■□□□ 1.08
CTTN-203ENST00000376561 KIF1BPQ96EK5 621 aa21.83■■□□□ 1.08
CTTN-203ENST00000376561 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.83■■□□□ 1.08
CTTN-203ENST00000376561 CYP19A1P11511 503 aaPredicted RBP21.82■■□□□ 1.08
CTTN-203ENST00000376561 IL1RAPL2Q9NP60 686 aa21.82■■□□□ 1.08
CTTN-203ENST00000376561 USP21Q9UK80 565 aa21.82■■□□□ 1.08
CTTN-203ENST00000376561 TJP1Q07157 1748 aa21.82■■□□□ 1.08
CTTN-203ENST00000376561 A0A087WZG4 1122 aa21.82■■□□□ 1.08
CTTN-203ENST00000376561 TBC1D9Q6ZT07 1266 aa21.82■■□□□ 1.08
CTTN-203ENST00000376561 COL15A1P39059 1388 aa21.81■■□□□ 1.08
CTTN-203ENST00000376561 HSPA1LP34931 641 aa21.81■■□□□ 1.08
CTTN-203ENST00000376561 UBE3BQ7Z3V4 1068 aa21.81■■□□□ 1.08
CTTN-203ENST00000376561 ZNF330Q9Y3S2 320 aaPredicted RBP21.81■■□□□ 1.08
CTTN-203ENST00000376561 A0A0G2JS52 829 aa21.8■■□□□ 1.08
CTTN-203ENST00000376561 CDC45O75419 566 aa21.8■■□□□ 1.08
CTTN-203ENST00000376561 MX1P20591 662 aa21.8■■□□□ 1.08
CTTN-203ENST00000376561 EPHA10Q5JZY3 1008 aa21.8■■□□□ 1.08
CTTN-203ENST00000376561 JARID2Q92833 1246 aaPredicted RBP21.8■■□□□ 1.08
CTTN-203ENST00000376561 SDSP20132 328 aa21.79■■□□□ 1.08
CTTN-203ENST00000376561 CASP7P55210 303 aa21.79■■□□□ 1.08
CTTN-203ENST00000376561 CWC25Q9NXE8 425 aaPredicted RBP21.79■■□□□ 1.08
CTTN-203ENST00000376561 PA2G4Q9UQ80 394 aaKnown RBP21.79■■□□□ 1.08
CTTN-203ENST00000376561 STAP2Q9UGK3 403 aa21.79■■□□□ 1.08
CTTN-203ENST00000376561 OS9Q13438 667 aaPredicted RBP21.78■■□□□ 1.08
CTTN-203ENST00000376561 CCDC191Q8NCU4 936 aa21.78■■□□□ 1.08
CTTN-203ENST00000376561 H7C1W4 665 aa21.78■■□□□ 1.08
CTTN-203ENST00000376561 KIF6Q6ZMV9 814 aa21.78■■□□□ 1.08
CTTN-203ENST00000376561 RABL6Q3YEC7 729 aaPredicted RBP21.77■■□□□ 1.08
CTTN-203ENST00000376561 TSHZ3Q63HK5 1081 aa21.77■■□□□ 1.08
CTTN-203ENST00000376561 C22orf23Q9BZE7 217 aa21.77■■□□□ 1.08
CTTN-203ENST00000376561 ZBTB1Q9Y2K1 713 aa21.77■■□□□ 1.08
CTTN-203ENST00000376561 TUBGCP6Q96RT7 1819 aa21.77■■□□□ 1.07
CTTN-203ENST00000376561 ERC1Q8IUD2 1116 aa21.76■■□□□ 1.07
CTTN-203ENST00000376561 TCIRG1Q13488 830 aa21.76■■□□□ 1.07
CTTN-203ENST00000376561 MEX3CQ5U5Q3 659 aaKnown RBP21.76■■□□□ 1.07
CTTN-203ENST00000376561 ISCA1Q9BUE6 129 aa21.76■■□□□ 1.07
CTTN-203ENST00000376561 AOX1Q06278 1338 aa21.75■■□□□ 1.07
CTTN-203ENST00000376561 NUTM1Q86Y26 1132 aa21.75■■□□□ 1.07
CTTN-203ENST00000376561 MAP3K15Q6ZN16 1313 aa21.75■■□□□ 1.07
CTTN-203ENST00000376561 KCNQ2O43526 872 aa21.75■■□□□ 1.07
CTTN-203ENST00000376561 ERICH6Q7L0X2 663 aa21.75■■□□□ 1.07
CTTN-203ENST00000376561 MYT1Q01538 1121 aa21.74■■□□□ 1.07
CTTN-203ENST00000376561 THSD7AQ9UPZ6 1657 aa21.74■■□□□ 1.07
CTTN-203ENST00000376561 LOC102724428A0A0B4J2F2 783 aa21.74■■□□□ 1.07
CTTN-203ENST00000376561 SIK1P57059 783 aa21.74■■□□□ 1.07
CTTN-203ENST00000376561 ARXQ96QS3 562 aa21.74■■□□□ 1.07
CTTN-203ENST00000376561 PALLDQ8WX93 1383 aa21.73■■□□□ 1.07
CTTN-203ENST00000376561 ATP6V1AP38606 617 aa21.73■■□□□ 1.07
CTTN-203ENST00000376561 IL6STP40189 918 aaPredicted RBP21.73■■□□□ 1.07
CTTN-203ENST00000376561 TRIM28Q13263 835 aaKnown RBP21.73■■□□□ 1.07
CTTN-203ENST00000376561 G3BP1Q13283 466 aaKnown RBP eCLIP21.73■■□□□ 1.072e-6■□□□□ 9.5
CTTN-203ENST00000376561 CLASRPQ8N2M8 674 aaKnown RBP21.73■■□□□ 1.07
CTTN-203ENST00000376561 CICQ96RK0 1608 aaPredicted RBP21.73■■□□□ 1.07
CTTN-203ENST00000376561 GIGYF2Q6Y7W6 1299 aaKnown RBP21.72■■□□□ 1.07
CTTN-203ENST00000376561 FOXO4P98177 505 aa21.72■■□□□ 1.07
CTTN-203ENST00000376561 RTL5Q5HYW3 569 aaPredicted RBP21.72■■□□□ 1.07
CTTN-203ENST00000376561 KLHDC4Q8TBB5 520 aa21.72■■□□□ 1.07
CTTN-203ENST00000376561 SMARCC1Q92922 1105 aaPredicted RBP21.72■■□□□ 1.07
CTTN-203ENST00000376561 SASH1O94885 1247 aa21.71■■□□□ 1.07
CTTN-203ENST00000376561 RFX5P48382 616 aaPredicted RBP21.71■■□□□ 1.07
CTTN-203ENST00000376561 COPRSQ9NQ92 184 aa21.71■■□□□ 1.07
CTTN-203ENST00000376561 EIF5BO60841 1220 aaKnown RBP21.71■■□□□ 1.07
CTTN-203ENST00000376561 SIL1Q9H173 461 aa21.71■■□□□ 1.07
CTTN-203ENST00000376561 AFF2P51816 1311 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms