RNA–Protein interactions for RNA: ENST00000375238.8

NECAB3-202, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECAB3, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-202ENST00000375238 ANKRD13DQ6ZTN6 518 aa24.02■■□□□ 1.44
NECAB3-202ENST00000375238 LINS1Q8NG48 757 aa24.02■■□□□ 1.44
NECAB3-202ENST00000375238 TEX13AQ9BXU3 409 aaPredicted RBP24.02■■□□□ 1.44
NECAB3-202ENST00000375238 TBC1D2Q9BYX2 928 aa24.02■■□□□ 1.44
NECAB3-202ENST00000375238 CWF19L2Q2TBE0 894 aaKnown RBP24.01■■□□□ 1.43
NECAB3-202ENST00000375238 AFF2P51816 1311 aa24.01■■□□□ 1.43
NECAB3-202ENST00000375238 ARFGEF2Q9Y6D5 1785 aa24.01■■□□□ 1.43
NECAB3-202ENST00000375238 NBPF7P0C2Y1 421 aaPredicted RBP24■■□□□ 1.43
NECAB3-202ENST00000375238 NEXNQ0ZGT2 675 aa24■■□□□ 1.43
NECAB3-202ENST00000375238 DNAJC10Q8IXB1 793 aa24■■□□□ 1.43
NECAB3-202ENST00000375238 C9orf78Q9NZ63 289 aaPredicted RBP23.99■■□□□ 1.43
NECAB3-202ENST00000375238 METTL22Q9BUU2 404 aaPredicted RBP23.98■■□□□ 1.43
NECAB3-202ENST00000375238 ATP8B2P98198 1209 aa23.98■■□□□ 1.43
NECAB3-202ENST00000375238 MYD88Q99836 296 aa23.98■■□□□ 1.43
NECAB3-202ENST00000375238 STARD3NLO95772 234 aa23.97■■□□□ 1.43
NECAB3-202ENST00000375238 PLBD2Q8NHP8 589 aa23.97■■□□□ 1.43
NECAB3-202ENST00000375238 ANTXR1Q9H6X2 564 aa23.97■■□□□ 1.43
NECAB3-202ENST00000375238 THSD7AQ9UPZ6 1657 aa23.97■■□□□ 1.43
NECAB3-202ENST00000375238 IGKV5-2P06315 115 aa23.96■■□□□ 1.43
NECAB3-202ENST00000375238 AFDNP55196 1824 aaKnown RBP23.96■■□□□ 1.43
NECAB3-202ENST00000375238 PNMA6EA0A0J9YXQ4 647 aa23.96■■□□□ 1.43
NECAB3-202ENST00000375238 FRAT2O75474 233 aaPredicted RBP23.95■■□□□ 1.42
NECAB3-202ENST00000375238 GJD4Q96KN9 370 aaPredicted RBP23.95■■□□□ 1.42
NECAB3-202ENST00000375238 SLC4A9Q96Q91 983 aa23.95■■□□□ 1.42
NECAB3-202ENST00000375238 TJP1Q07157 1748 aa23.94■■□□□ 1.42
NECAB3-202ENST00000375238 NUP188Q5SRE5 1749 aa23.94■■□□□ 1.42
NECAB3-202ENST00000375238 NEURL1BA8MQ27 555 aa23.94■■□□□ 1.42
NECAB3-202ENST00000375238 TTLL7Q6ZT98 887 aa23.94■■□□□ 1.42
NECAB3-202ENST00000375238 GRM8O00222 908 aa23.94■■□□□ 1.42
NECAB3-202ENST00000375238 RBM25P49756 843 aaKnown RBP23.93■■□□□ 1.42
NECAB3-202ENST00000375238 HDAC5Q9UQL6 1122 aa23.93■■□□□ 1.42
NECAB3-202ENST00000375238 ZNF330Q9Y3S2 320 aaPredicted RBP23.93■■□□□ 1.42
NECAB3-202ENST00000375238 APBB1O00213 710 aa23.92■■□□□ 1.42
NECAB3-202ENST00000375238 ATRNO75882 1429 aa23.92■■□□□ 1.42
NECAB3-202ENST00000375238 TRPC5Q9UL62 973 aaPredicted RBP23.92■■□□□ 1.42
NECAB3-202ENST00000375238 KCNQ2O43526 872 aa23.91■■□□□ 1.42
NECAB3-202ENST00000375238 CYP19A1P11511 503 aaPredicted RBP23.91■■□□□ 1.42
NECAB3-202ENST00000375238 GCKRQ14397 625 aa23.91■■□□□ 1.42
NECAB3-202ENST00000375238 PPP1R42Q7Z4L9 355 aa23.91■■□□□ 1.42
NECAB3-202ENST00000375238 PLEKHM2Q8IWE5 1019 aa23.91■■□□□ 1.42
NECAB3-202ENST00000375238 SLKQ9H2G2 1235 aaPredicted RBP23.91■■□□□ 1.42
NECAB3-202ENST00000375238 IBTKQ9P2D0 1353 aaPredicted RBP23.91■■□□□ 1.42
NECAB3-202ENST00000375238 UTYO14607 1347 aa23.91■■□□□ 1.42
NECAB3-202ENST00000375238 BCL11AQ9H165 835 aa23.9■■□□□ 1.42
NECAB3-202ENST00000375238 ZBTB3Q9H5J0 574 aa23.9■■□□□ 1.42
NECAB3-202ENST00000375238 ATP5J2-PTCD1G3V325 749 aa23.9■■□□□ 1.42
NECAB3-202ENST00000375238 SSH3Q8TE77 659 aa23.9■■□□□ 1.42
NECAB3-202ENST00000375238 EXOC6BQ9Y2D4 811 aa23.9■■□□□ 1.42
NECAB3-202ENST00000375238 SRGAP3O43295 1099 aa23.89■■□□□ 1.42
NECAB3-202ENST00000375238 PALLDQ8WX93 1383 aa23.89■■□□□ 1.41
NECAB3-202ENST00000375238 TBC1D9Q6ZT07 1266 aa23.88■■□□□ 1.41
NECAB3-202ENST00000375238 SMARCA5O60264 1052 aaPredicted RBP23.87■■□□□ 1.41
NECAB3-202ENST00000375238 GSPT1P15170 499 aaKnown RBP23.87■■□□□ 1.41
NECAB3-202ENST00000375238 POLA2Q14181 598 aa23.87■■□□□ 1.41
NECAB3-202ENST00000375238 SMARCC1Q92922 1105 aaPredicted RBP23.87■■□□□ 1.41
NECAB3-202ENST00000375238 SUCLG2Q96I99 432 aa23.87■■□□□ 1.41
NECAB3-202ENST00000375238 LOC102724428A0A0B4J2F2 783 aa23.86■■□□□ 1.41
NECAB3-202ENST00000375238 ATP6V1AP38606 617 aa23.86■■□□□ 1.41
NECAB3-202ENST00000375238 SIK1P57059 783 aa23.86■■□□□ 1.41
NECAB3-202ENST00000375238 KIF6Q6ZMV9 814 aa23.86■■□□□ 1.41
NECAB3-202ENST00000375238 C16orf71Q8IYS4 520 aaPredicted RBP23.86■■□□□ 1.41
NECAB3-202ENST00000375238 ZBTB1Q9Y2K1 713 aa23.86■■□□□ 1.41
NECAB3-202ENST00000375238 MTX1Q13505 466 aa23.85■■□□□ 1.41
NECAB3-202ENST00000375238 ARXQ96QS3 562 aa23.85■■□□□ 1.41
NECAB3-202ENST00000375238 QTRT2Q9H974 415 aaKnown RBP23.84■■□□□ 1.41
NECAB3-202ENST00000375238 GSE1Q14687 1217 aa23.84■■□□□ 1.41
NECAB3-202ENST00000375238 KAZALD1Q96I82 304 aa23.84■■□□□ 1.41
NECAB3-202ENST00000375238 CICQ96RK0 1608 aaPredicted RBP23.83■■□□□ 1.41
NECAB3-202ENST00000375238 A0A087WZG4 1122 aa23.83■■□□□ 1.41
NECAB3-202ENST00000375238 SURF6O75683 361 aaKnown RBP23.83■■□□□ 1.41
NECAB3-202ENST00000375238 FAM182BQ5T319 152 aa23.83■■□□□ 1.41
NECAB3-202ENST00000375238 TTC22Q5TAA0 569 aa23.83■■□□□ 1.41
NECAB3-202ENST00000375238 LRRCC1Q9C099 1032 aa23.83■■□□□ 1.41
NECAB3-202ENST00000375238 BICC1Q9H694 974 aaKnown RBP23.83■■□□□ 1.41
NECAB3-202ENST00000375238 ONECUT3O60422 494 aaPredicted RBP23.82■■□□□ 1.4
NECAB3-202ENST00000375238 CDC45O75419 566 aa23.82■■□□□ 1.4
NECAB3-202ENST00000375238 UBE3BQ7Z3V4 1068 aa23.82■■□□□ 1.4
NECAB3-202ENST00000375238 SEPT12Q8IYM1 358 aa23.82■■□□□ 1.4
NECAB3-202ENST00000375238 JARID2Q92833 1246 aaPredicted RBP23.82■■□□□ 1.4
NECAB3-202ENST00000375238 KIF2CQ99661 725 aa23.82■■□□□ 1.4
NECAB3-202ENST00000375238 NHSQ6T4R5 1651 aa23.82■■□□□ 1.4
NECAB3-202ENST00000375238 OTUD7AQ8TE49 926 aaPredicted RBP23.82■■□□□ 1.4
NECAB3-202ENST00000375238 SNX21Q969T3 373 aa23.82■■□□□ 1.4
NECAB3-202ENST00000375238 CWC25Q9NXE8 425 aaPredicted RBP23.82■■□□□ 1.4
NECAB3-202ENST00000375238 BTAF1O14981 1849 aa23.81■■□□□ 1.4
NECAB3-202ENST00000375238 MAP3K15Q6ZN16 1313 aa23.8■■□□□ 1.4
NECAB3-202ENST00000375238 IL6STP40189 918 aaPredicted RBP23.8■■□□□ 1.4
NECAB3-202ENST00000375238 ITPK1Q13572 414 aa23.8■■□□□ 1.4
NECAB3-202ENST00000375238 CCDC87Q9NVE4 849 aa23.8■■□□□ 1.4
NECAB3-202ENST00000375238 CRKLP46109 303 aaKnown RBP23.8■■□□□ 1.4
NECAB3-202ENST00000375238 RAB11FIP3O75154 756 aa23.79■■□□□ 1.4
NECAB3-202ENST00000375238 TCIRG1Q13488 830 aa23.79■■□□□ 1.4
NECAB3-202ENST00000375238 PTF1AQ7RTS3 328 aa23.79■■□□□ 1.4
NECAB3-202ENST00000375238 SPRYD3Q8NCJ5 442 aa23.79■■□□□ 1.4
NECAB3-202ENST00000375238 CCDC191Q8NCU4 936 aa23.79■■□□□ 1.4
NECAB3-202ENST00000375238 INTS5Q6P9B9 1019 aaKnown RBP23.78■■□□□ 1.4
NECAB3-202ENST00000375238 HSCBQ8IWL3 235 aa23.78■■□□□ 1.4
NECAB3-202ENST00000375238 ZNF831Q5JPB2 1677 aa23.78■■□□□ 1.4
NECAB3-202ENST00000375238 RREB1Q92766 1687 aa23.78■■□□□ 1.4
NECAB3-202ENST00000375238 HSP90AB4PQ58FF6 505 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms