RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 TTLL7Q6ZT98 887 aa21.78■■□□□ 1.08
SSBP3-203ENST00000371319 C16orf71Q8IYS4 520 aaPredicted RBP21.78■■□□□ 1.08
SSBP3-203ENST00000371319 SYTL4Q96C24 671 aaPredicted RBP21.78■■□□□ 1.08
SSBP3-203ENST00000371319 THSD7AQ9UPZ6 1657 aa21.78■■□□□ 1.08
SSBP3-203ENST00000371319 KAT6BQ8WYB5 2073 aa21.78■■□□□ 1.08
SSBP3-203ENST00000371319 APBB1O00213 710 aa21.78■■□□□ 1.08
SSBP3-203ENST00000371319 MTX1Q13505 466 aa21.78■■□□□ 1.08
SSBP3-203ENST00000371319 GCKRQ14397 625 aa21.78■■□□□ 1.08
SSBP3-203ENST00000371319 HDAC5Q9UQL6 1122 aa21.78■■□□□ 1.08
SSBP3-203ENST00000371319 SEC24BO95487 1268 aa21.77■■□□□ 1.08
SSBP3-203ENST00000371319 KAZALD1Q96I82 304 aa21.77■■□□□ 1.08
SSBP3-203ENST00000371319 SUCLG2Q96I99 432 aa21.77■■□□□ 1.08
SSBP3-203ENST00000371319 ZBTB47Q9UFB7 747 aaPredicted RBP21.77■■□□□ 1.08
SSBP3-203ENST00000371319 USP21Q9UK80 565 aa21.77■■□□□ 1.08
SSBP3-203ENST00000371319 ANP32AP39687 249 aaKnown RBP21.76■■□□□ 1.07
SSBP3-203ENST00000371319 BMP2KLQ5H9B9 411 aa21.76■■□□□ 1.07
SSBP3-203ENST00000371319 NPM2Q86SE8 214 aaKnown RBP21.76■■□□□ 1.07
SSBP3-203ENST00000371319 OTUD7AQ8TE49 926 aaPredicted RBP21.76■■□□□ 1.07
SSBP3-203ENST00000371319 SRGAP3O43295 1099 aa21.75■■□□□ 1.07
SSBP3-203ENST00000371319 ACSBG1Q96GR2 724 aa21.75■■□□□ 1.07
SSBP3-203ENST00000371319 CICQ96RK0 1608 aaPredicted RBP21.75■■□□□ 1.07
SSBP3-203ENST00000371319 STARD3NLO95772 234 aa21.74■■□□□ 1.07
SSBP3-203ENST00000371319 CYP19A1P11511 503 aaPredicted RBP21.74■■□□□ 1.07
SSBP3-203ENST00000371319 LRRCC1Q9C099 1032 aa21.74■■□□□ 1.07
SSBP3-203ENST00000371319 ATP5J2-PTCD1G3V325 749 aa21.72■■□□□ 1.07
SSBP3-203ENST00000371319 RAB11FIP3O75154 756 aa21.72■■□□□ 1.07
SSBP3-203ENST00000371319 COL15A1P39059 1388 aa21.72■■□□□ 1.07
SSBP3-203ENST00000371319 GSPT1P15170 499 aaKnown RBP21.71■■□□□ 1.07
SSBP3-203ENST00000371319 TTC22Q5TAA0 569 aa21.71■■□□□ 1.07
SSBP3-203ENST00000371319 MEX3CQ5U5Q3 659 aaKnown RBP21.71■■□□□ 1.07
SSBP3-203ENST00000371319 BICC1Q9H694 974 aaKnown RBP21.71■■□□□ 1.07
SSBP3-203ENST00000371319 SALL3Q9BXA9 1300 aa21.71■■□□□ 1.07
SSBP3-203ENST00000371319 RREB1Q92766 1687 aa21.71■■□□□ 1.07
SSBP3-203ENST00000371319 SURF6O75683 361 aaKnown RBP21.7■■□□□ 1.06
SSBP3-203ENST00000371319 CASP7P55210 303 aa21.7■■□□□ 1.06
SSBP3-203ENST00000371319 ZBTB3Q9H5J0 574 aa21.7■■□□□ 1.06
SSBP3-203ENST00000371319 NOP58Q9Y2X3 529 aaKnown RBP21.7■■□□□ 1.06
SSBP3-203ENST00000371319 MSH5O43196 834 aa21.7■■□□□ 1.06
SSBP3-203ENST00000371319 TUBGCP6Q96RT7 1819 aa21.69■■□□□ 1.06
SSBP3-203ENST00000371319 ATRNO75882 1429 aa21.69■■□□□ 1.06
SSBP3-203ENST00000371319 EPHA10Q5JZY3 1008 aa21.69■■□□□ 1.06
SSBP3-203ENST00000371319 BCL11AQ9H165 835 aa21.69■■□□□ 1.06
SSBP3-203ENST00000371319 AFF2P51816 1311 aa21.69■■□□□ 1.06
SSBP3-203ENST00000371319 A0A0G2JS52 829 aa21.68■■□□□ 1.06
SSBP3-203ENST00000371319 IPO9Q96P70 1041 aaKnown RBP21.68■■□□□ 1.06
SSBP3-203ENST00000371319 OSBPL3Q9H4L5 887 aa21.68■■□□□ 1.06
SSBP3-203ENST00000371319 ZNF831Q5JPB2 1677 aa21.67■■□□□ 1.06
SSBP3-203ENST00000371319 A0A087WZG4 1122 aa21.67■■□□□ 1.06
SSBP3-203ENST00000371319 H7C1W4 665 aa21.67■■□□□ 1.06
SSBP3-203ENST00000371319 KCNQ2O43526 872 aa21.67■■□□□ 1.06
SSBP3-203ENST00000371319 JARID2Q92833 1246 aaPredicted RBP21.67■■□□□ 1.06
SSBP3-203ENST00000371319 ZBTB1Q9Y2K1 713 aa21.67■■□□□ 1.06
SSBP3-203ENST00000371319 PALLDQ8WX93 1383 aa21.66■■□□□ 1.06
SSBP3-203ENST00000371319 PDE1AP54750 535 aa21.66■■□□□ 1.06
SSBP3-203ENST00000371319 HSP90AB4PQ58FF6 505 aa21.66■■□□□ 1.06
SSBP3-203ENST00000371319 UBE3BQ7Z3V4 1068 aa21.66■■□□□ 1.06
SSBP3-203ENST00000371319 RHPN1Q8TCX5 695 aa21.66■■□□□ 1.06
SSBP3-203ENST00000371319 ISCA1Q9BUE6 129 aa21.66■■□□□ 1.06
SSBP3-203ENST00000371319 CWC25Q9NXE8 425 aaPredicted RBP21.66■■□□□ 1.06
SSBP3-203ENST00000371319 KIF6Q6ZMV9 814 aa21.65■■□□□ 1.06
SSBP3-203ENST00000371319 GJD4Q96KN9 370 aaPredicted RBP21.65■■□□□ 1.06
SSBP3-203ENST00000371319 ANKRD36CQ5JPF3 1778 aa21.65■■□□□ 1.06
SSBP3-203ENST00000371319 COL5A3P25940 1745 aaPredicted RBP21.65■■□□□ 1.06
SSBP3-203ENST00000371319 NHSQ6T4R5 1651 aa21.65■■□□□ 1.06
SSBP3-203ENST00000371319 MAP3K15Q6ZN16 1313 aa21.65■■□□□ 1.06
SSBP3-203ENST00000371319 TCIRG1Q13488 830 aa21.65■■□□□ 1.06
SSBP3-203ENST00000371319 CCDC191Q8NCU4 936 aa21.65■■□□□ 1.06
SSBP3-203ENST00000371319 KIF1BPQ96EK5 621 aa21.65■■□□□ 1.06
SSBP3-203ENST00000371319 PA2G4Q9UQ80 394 aaKnown RBP21.65■■□□□ 1.06
SSBP3-203ENST00000371319 ZNF330Q9Y3S2 320 aaPredicted RBP21.65■■□□□ 1.06
SSBP3-203ENST00000371319 LOC102724428A0A0B4J2F2 783 aa21.64■■□□□ 1.05
SSBP3-203ENST00000371319 SIK1P57059 783 aa21.64■■□□□ 1.05
SSBP3-203ENST00000371319 RABL6Q3YEC7 729 aaPredicted RBP21.64■■□□□ 1.05
SSBP3-203ENST00000371319 SMARCC1Q92922 1105 aaPredicted RBP21.64■■□□□ 1.05
SSBP3-203ENST00000371319 IL1RAPL2Q9NP60 686 aa21.64■■□□□ 1.05
SSBP3-203ENST00000371319 STAP2Q9UGK3 403 aa21.64■■□□□ 1.05
SSBP3-203ENST00000371319 MYT1Q01538 1121 aa21.63■■□□□ 1.05
SSBP3-203ENST00000371319 ITPK1Q13572 414 aa21.63■■□□□ 1.05
SSBP3-203ENST00000371319 MX1P20591 662 aa21.62■■□□□ 1.05
SSBP3-203ENST00000371319 ATP6V1AP38606 617 aa21.62■■□□□ 1.05
SSBP3-203ENST00000371319 IL6STP40189 918 aaPredicted RBP21.62■■□□□ 1.05
SSBP3-203ENST00000371319 INTS5Q6P9B9 1019 aaKnown RBP21.62■■□□□ 1.05
SSBP3-203ENST00000371319 BTAF1O14981 1849 aa21.62■■□□□ 1.05
SSBP3-203ENST00000371319 NUP98P52948 1817 aa21.62■■□□□ 1.05
SSBP3-203ENST00000371319 CDC45O75419 566 aa21.61■■□□□ 1.05
SSBP3-203ENST00000371319 RFX5P48382 616 aaPredicted RBP21.61■■□□□ 1.05
SSBP3-203ENST00000371319 FOXO4P98177 505 aa21.61■■□□□ 1.05
SSBP3-203ENST00000371319 TRIM28Q13263 835 aaKnown RBP21.61■■□□□ 1.05
SSBP3-203ENST00000371319 TBC1D9Q6ZT07 1266 aa21.61■■□□□ 1.05
SSBP3-203ENST00000371319 TBC1D32Q96NH3 1257 aa21.61■■□□□ 1.05
SSBP3-203ENST00000371319 MYH14Q7Z406 1995 aaKnown RBP21.61■■□□□ 1.05
SSBP3-203ENST00000371319 AOX1Q06278 1338 aa21.61■■□□□ 1.05
SSBP3-203ENST00000371319 ONECUT3O60422 494 aaPredicted RBP21.61■■□□□ 1.05
SSBP3-203ENST00000371319 GIGYF2Q6Y7W6 1299 aaKnown RBP21.61■■□□□ 1.05
SSBP3-203ENST00000371319 CCDC87Q9NVE4 849 aa21.61■■□□□ 1.05
SSBP3-203ENST00000371319 TRPC5Q9UL62 973 aaPredicted RBP21.61■■□□□ 1.05
SSBP3-203ENST00000371319 SDSP20132 328 aa21.6■■□□□ 1.05
SSBP3-203ENST00000371319 MFAP1P55081 439 aaKnown RBP21.6■■□□□ 1.05
SSBP3-203ENST00000371319 OS9Q13438 667 aaPredicted RBP21.6■■□□□ 1.05
SSBP3-203ENST00000371319 HLFQ16534 295 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 386 ms