RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 PTF1AQ7RTS3 328 aa16.66■□□□□ 0.26
UBA3-201ENST00000349511 ARXQ96QS3 562 aa16.66■□□□□ 0.26
UBA3-201ENST00000349511 MYD88Q99836 296 aa16.66■□□□□ 0.26
UBA3-201ENST00000349511 BECN1Q14457 450 aa16.66■□□□□ 0.26
UBA3-201ENST00000349511 RPAP2Q8IXW5 612 aaPredicted RBP16.66■□□□□ 0.26
UBA3-201ENST00000349511 PNMA6EA0A0J9YXQ4 647 aa16.65■□□□□ 0.26
UBA3-201ENST00000349511 IGKV5-2P06315 115 aa16.65■□□□□ 0.26
UBA3-201ENST00000349511 C9orf78Q9NZ63 289 aaPredicted RBP16.65■□□□□ 0.26
UBA3-201ENST00000349511 ATP5J2-PTCD1G3V325 749 aa16.64■□□□□ 0.25
UBA3-201ENST00000349511 JARID2Q92833 1246 aaPredicted RBP16.64■□□□□ 0.25
UBA3-201ENST00000349511 QTRT2Q9H974 415 aaKnown RBP16.64■□□□□ 0.25
UBA3-201ENST00000349511 ZBTB3Q9H5J0 574 aa16.64■□□□□ 0.25
UBA3-201ENST00000349511 UPF2Q9HAU5 1272 aaKnown RBP16.63■□□□□ 0.25
UBA3-201ENST00000349511 TRPC5Q9UL62 973 aaPredicted RBP16.63■□□□□ 0.25
UBA3-201ENST00000349511 N4BP2Q86UW6 1770 aaPredicted RBP16.63■□□□□ 0.25
UBA3-201ENST00000349511 STARD3NLO95772 234 aa16.63■□□□□ 0.25
UBA3-201ENST00000349511 NUCB1Q02818 461 aa16.63■□□□□ 0.25
UBA3-201ENST00000349511 NEXNQ0ZGT2 675 aa16.63■□□□□ 0.25
UBA3-201ENST00000349511 VSIG10Q8N0Z9 540 aa16.63■□□□□ 0.25
UBA3-201ENST00000349511 LINS1Q8NG48 757 aa16.63■□□□□ 0.25
UBA3-201ENST00000349511 GCC1Q96CN9 775 aa16.63■□□□□ 0.25
UBA3-201ENST00000349511 TBC1D32Q96NH3 1257 aa16.63■□□□□ 0.25
UBA3-201ENST00000349511 METTL22Q9BUU2 404 aaPredicted RBP16.63■□□□□ 0.25
UBA3-201ENST00000349511 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.63■□□□□ 0.25
UBA3-201ENST00000349511 KCNQ4P56696 695 aa16.62■□□□□ 0.25
UBA3-201ENST00000349511 CHD1LQ86WJ1 897 aa16.62■□□□□ 0.25
UBA3-201ENST00000349511 DCTPP1Q9H773 170 aa16.62■□□□□ 0.25
UBA3-201ENST00000349511 ATP6V1AP38606 617 aa16.61■□□□□ 0.25
UBA3-201ENST00000349511 NEURL1BA8MQ27 555 aa16.61■□□□□ 0.25
UBA3-201ENST00000349511 SMARCA5O60264 1052 aaPredicted RBP16.61■□□□□ 0.25
UBA3-201ENST00000349511 ALDH1L1O75891 902 aa16.61■□□□□ 0.25
UBA3-201ENST00000349511 CYP19A1P11511 503 aaPredicted RBP16.61■□□□□ 0.25
UBA3-201ENST00000349511 SEPT12Q8IYM1 358 aa16.61■□□□□ 0.25
UBA3-201ENST00000349511 PLBD2Q8NHP8 589 aa16.61■□□□□ 0.25
UBA3-201ENST00000349511 TEX13AQ9BXU3 409 aaPredicted RBP16.61■□□□□ 0.25
UBA3-201ENST00000349511 RTN4Q9NQC3 1192 aaKnown RBP16.61■□□□□ 0.25
UBA3-201ENST00000349511 EXOC6BQ9Y2D4 811 aa16.61■□□□□ 0.25
UBA3-201ENST00000349511 ZBTB1Q9Y2K1 713 aa16.61■□□□□ 0.25
UBA3-201ENST00000349511 ERBB4Q15303 1308 aa16.6■□□□□ 0.25
UBA3-201ENST00000349511 ATP8B2P98198 1209 aa16.6■□□□□ 0.25
UBA3-201ENST00000349511 BRPF3Q9ULD4 1205 aa16.6■□□□□ 0.25
UBA3-201ENST00000349511 LOC102724428A0A0B4J2F2 783 aa16.6■□□□□ 0.25
UBA3-201ENST00000349511 GRM8O00222 908 aa16.6■□□□□ 0.25
UBA3-201ENST00000349511 SIK1P57059 783 aa16.6■□□□□ 0.25
UBA3-201ENST00000349511 PPP1R42Q7Z4L9 355 aa16.6■□□□□ 0.25
UBA3-201ENST00000349511 HMMRO75330 724 aa16.59■□□□□ 0.25
UBA3-201ENST00000349511 C16orf71Q8IYS4 520 aaPredicted RBP16.59■□□□□ 0.25
UBA3-201ENST00000349511 SLKQ9H2G2 1235 aaPredicted RBP16.59■□□□□ 0.25
UBA3-201ENST00000349511 ATRNO75882 1429 aa16.59■□□□□ 0.25
UBA3-201ENST00000349511 PALLDQ8WX93 1383 aa16.59■□□□□ 0.25
UBA3-201ENST00000349511 ARFGEF2Q9Y6D5 1785 aa16.58■□□□□ 0.25
UBA3-201ENST00000349511 GCKRQ14397 625 aa16.58■□□□□ 0.25
UBA3-201ENST00000349511 SUCLG2Q96I99 432 aa16.58■□□□□ 0.25
UBA3-201ENST00000349511 SRGAP3O43295 1099 aa16.58■□□□□ 0.24
UBA3-201ENST00000349511 ITPK1Q13572 414 aa16.58■□□□□ 0.24
UBA3-201ENST00000349511 THSD7AQ9UPZ6 1657 aa16.57■□□□□ 0.24
UBA3-201ENST00000349511 TBC1D2Q9BYX2 928 aa16.57■□□□□ 0.24
UBA3-201ENST00000349511 ANTXR1Q9H6X2 564 aa16.57■□□□□ 0.24
UBA3-201ENST00000349511 KAZALD1Q96I82 304 aa16.56■□□□□ 0.24
UBA3-201ENST00000349511 BICC1Q9H694 974 aaKnown RBP16.56■□□□□ 0.24
UBA3-201ENST00000349511 AFDNP55196 1824 aaKnown RBP16.56■□□□□ 0.24
UBA3-201ENST00000349511 A0A087WZG4 1122 aa16.55■□□□□ 0.24
UBA3-201ENST00000349511 UBE3BQ7Z3V4 1068 aa16.55■□□□□ 0.24
UBA3-201ENST00000349511 TBC1D2BQ9UPU7 963 aa16.55■□□□□ 0.24
UBA3-201ENST00000349511 TJP1Q07157 1748 aa16.55■□□□□ 0.24
UBA3-201ENST00000349511 ONECUT3O60422 494 aaPredicted RBP16.55■□□□□ 0.24
UBA3-201ENST00000349511 CRKLP46109 303 aaKnown RBP16.55■□□□□ 0.24
UBA3-201ENST00000349511 OTUD7AQ8TE49 926 aaPredicted RBP16.55■□□□□ 0.24
UBA3-201ENST00000349511 HLFQ16534 295 aa16.54■□□□□ 0.24
UBA3-201ENST00000349511 KIF6Q6ZMV9 814 aa16.54■□□□□ 0.24
UBA3-201ENST00000349511 SURF6O75683 361 aaKnown RBP16.54■□□□□ 0.24
UBA3-201ENST00000349511 EPHA10Q5JZY3 1008 aa16.54■□□□□ 0.24
UBA3-201ENST00000349511 SSH3Q8TE77 659 aa16.54■□□□□ 0.24
UBA3-201ENST00000349511 INTS5Q6P9B9 1019 aaKnown RBP16.53■□□□□ 0.24
UBA3-201ENST00000349511 SMIM5Q71RC9 77 aa16.53■□□□□ 0.24
UBA3-201ENST00000349511 SMARCC1Q92922 1105 aaPredicted RBP16.53■□□□□ 0.24
UBA3-201ENST00000349511 PA2G4Q9UQ80 394 aaKnown RBP16.53■□□□□ 0.24
UBA3-201ENST00000349511 UTYO14607 1347 aa16.52■□□□□ 0.24
UBA3-201ENST00000349511 GPTP24298 496 aa16.52■□□□□ 0.24
UBA3-201ENST00000349511 NUP188Q5SRE5 1749 aa16.52■□□□□ 0.24
UBA3-201ENST00000349511 POLA2Q14181 598 aa16.52■□□□□ 0.23
UBA3-201ENST00000349511 CCDC87Q9NVE4 849 aa16.52■□□□□ 0.23
UBA3-201ENST00000349511 MYH14Q7Z406 1995 aaKnown RBP16.52■□□□□ 0.23
UBA3-201ENST00000349511 MFAP1P55081 439 aaKnown RBP16.51■□□□□ 0.23
UBA3-201ENST00000349511 DZIP3Q86Y13 1208 aaKnown RBP16.51■□□□□ 0.23
UBA3-201ENST00000349511 C22orf23Q9BZE7 217 aa16.51■□□□□ 0.23
UBA3-201ENST00000349511 IL1RAPL2Q9NP60 686 aa16.51■□□□□ 0.23
UBA3-201ENST00000349511 CWC25Q9NXE8 425 aaPredicted RBP16.51■□□□□ 0.23
UBA3-201ENST00000349511 MAP3K15Q6ZN16 1313 aa16.51■□□□□ 0.23
UBA3-201ENST00000349511 KLHDC4Q8TBB5 520 aa16.51■□□□□ 0.23
UBA3-201ENST00000349511 IL6STP40189 918 aaPredicted RBP16.5■□□□□ 0.23
UBA3-201ENST00000349511 TCIRG1Q13488 830 aa16.5■□□□□ 0.23
UBA3-201ENST00000349511 PLEKHM2Q8IWE5 1019 aa16.5■□□□□ 0.23
UBA3-201ENST00000349511 LINC00116Q8NCU8 138 aa16.5■□□□□ 0.23
UBA3-201ENST00000349511 LRRCC1Q9C099 1032 aa16.5■□□□□ 0.23
UBA3-201ENST00000349511 BTAF1O14981 1849 aa16.5■□□□□ 0.23
UBA3-201ENST00000349511 TSHZ3Q63HK5 1081 aa16.49■□□□□ 0.23
UBA3-201ENST00000349511 GIGYF2Q6Y7W6 1299 aaKnown RBP16.49■□□□□ 0.23
UBA3-201ENST00000349511 SIL1Q9H173 461 aa16.49■□□□□ 0.23
UBA3-201ENST00000349511 IBTKQ9P2D0 1353 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms