RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 ZNF397Q8NF99 534 aaPredicted RBP18.07■□□□□ 0.48
SRPK1-201ENST00000346162 RBSNQ9H1K0 784 aa18.07■□□□□ 0.48
SRPK1-201ENST00000346162 TMX1Q9H3N1 280 aa18.07■□□□□ 0.48
SRPK1-201ENST00000346162 MAST1Q9Y2H9 1570 aa18.07■□□□□ 0.48
SRPK1-201ENST00000346162 NACAP1Q9BZK3 213 aa18.07■□□□□ 0.48
SRPK1-201ENST00000346162 DMRT2Q9Y5R5 561 aa18.07■□□□□ 0.48
SRPK1-201ENST00000346162 CFAP45Q9UL16 551 aa18.07■□□□□ 0.48
SRPK1-201ENST00000346162 NPATQ14207 1427 aa18.06■□□□□ 0.48
SRPK1-201ENST00000346162 MAP3K2Q9Y2U5 619 aa18.06■□□□□ 0.48
SRPK1-201ENST00000346162 FAM193AP78312 1265 aa18.06■□□□□ 0.48
SRPK1-201ENST00000346162 CERS3Q8IU89 383 aa18.06■□□□□ 0.48
SRPK1-201ENST00000346162 DDX11Q96FC9 970 aa18.06■□□□□ 0.48
SRPK1-201ENST00000346162 MTMR7Q9Y216 660 aa18.06■□□□□ 0.48
SRPK1-201ENST00000346162 TTC31Q49AM3 519 aaPredicted RBP18.06■□□□□ 0.48
SRPK1-201ENST00000346162 GNL3LQ9NVN8 582 aaKnown RBP18.06■□□□□ 0.48
SRPK1-201ENST00000346162 LIMCH1Q9UPQ0 1083 aa18.06■□□□□ 0.48
SRPK1-201ENST00000346162 SERPINC1P01008 464 aa18.06■□□□□ 0.48
SRPK1-201ENST00000346162 SFPQP23246 707 aaKnown RBP eCLIP18.06■□□□□ 0.48
SRPK1-201ENST00000346162 CLGNO14967 610 aa18.05■□□□□ 0.48
SRPK1-201ENST00000346162 KRT28Q7Z3Y7 464 aa18.05■□□□□ 0.48
SRPK1-201ENST00000346162 YTHDC2Q9H6S0 1430 aaKnown RBP18.05■□□□□ 0.48
SRPK1-201ENST00000346162 SH2B1Q9NRF2 756 aaPredicted RBP18.05■□□□□ 0.48
SRPK1-201ENST00000346162 STARD3NLO95772 234 aa18.05■□□□□ 0.48
SRPK1-201ENST00000346162 A0A087WZG4 1122 aa18.04■□□□□ 0.48
SRPK1-201ENST00000346162 KRT24Q2M2I5 525 aa18.04■□□□□ 0.48
SRPK1-201ENST00000346162 TARBP1Q13395 1621 aaKnown RBP18.04■□□□□ 0.48
SRPK1-201ENST00000346162 TRIM22Q8IYM9 498 aa18.04■□□□□ 0.48
SRPK1-201ENST00000346162 CEP170Q5SW79 1584 aa18.04■□□□□ 0.48
SRPK1-201ENST00000346162 NCKAP5LQ9HCH0 1330 aa18.04■□□□□ 0.48
SRPK1-201ENST00000346162 SHTN1A0MZ66 631 aa18.04■□□□□ 0.48
SRPK1-201ENST00000346162 FSD2A1L4K1 749 aa18.04■□□□□ 0.48
SRPK1-201ENST00000346162 PDE1AP54750 535 aa18.04■□□□□ 0.48
SRPK1-201ENST00000346162 MTHFSDQ2M296 383 aaKnown RBP18.04■□□□□ 0.48
SRPK1-201ENST00000346162 INSRP06213 1382 aa18.03■□□□□ 0.48
SRPK1-201ENST00000346162 RIOK3O14730 519 aaKnown RBP18.03■□□□□ 0.48
SRPK1-201ENST00000346162 ZNF500O60304 480 aaPredicted RBP18.03■□□□□ 0.48
SRPK1-201ENST00000346162 NEMFO60524 1076 aa18.03■□□□□ 0.48
SRPK1-201ENST00000346162 IVLP07476 585 aa18.03■□□□□ 0.48
SRPK1-201ENST00000346162 CEP57L1Q8IYX8 460 aa18.03■□□□□ 0.48
SRPK1-201ENST00000346162 RHPN1Q8TCX5 695 aa18.03■□□□□ 0.48
SRPK1-201ENST00000346162 RSPH14Q9UHP6 348 aa18.03■□□□□ 0.48
SRPK1-201ENST00000346162 ZFYVE9O95405 1425 aa18.03■□□□□ 0.48
SRPK1-201ENST00000346162 IDH1O75874 414 aaKnown RBP18.03■□□□□ 0.48
SRPK1-201ENST00000346162 MEX3CQ5U5Q3 659 aaKnown RBP18.03■□□□□ 0.48
SRPK1-201ENST00000346162 CCDC186Q7Z3E2 898 aa18.03■□□□□ 0.48
SRPK1-201ENST00000346162 STK11IPQ8N1F8 1099 aa18.03■□□□□ 0.48
SRPK1-201ENST00000346162 ANKRD24Q8TF21 1146 aa18.03■□□□□ 0.48
SRPK1-201ENST00000346162 SNX21Q969T3 373 aa18.03■□□□□ 0.48
SRPK1-201ENST00000346162 U3KPZ7 1027 aaPredicted RBP18.03■□□□□ 0.48
SRPK1-201ENST00000346162 MBD5Q9P267 1494 aa18.03■□□□□ 0.48
SRPK1-201ENST00000346162 ATP7AQ04656 1500 aa18.03■□□□□ 0.48
SRPK1-201ENST00000346162 C16orf71Q8IYS4 520 aaPredicted RBP18.03■□□□□ 0.48
SRPK1-201ENST00000346162 ZNF526Q8TF50 670 aaPredicted RBP18.03■□□□□ 0.48
SRPK1-201ENST00000346162 ABCC1P33527 1531 aa18.02■□□□□ 0.48
SRPK1-201ENST00000346162 EVI5LQ96CN4 794 aa18.02■□□□□ 0.48
SRPK1-201ENST00000346162 JAKMIP3Q5VZ66 844 aa18.02■□□□□ 0.48
SRPK1-201ENST00000346162 DCTPP1Q9H773 170 aa18.02■□□□□ 0.48
SRPK1-201ENST00000346162 BCL2L12Q9HB09 334 aa18.02■□□□□ 0.48
SRPK1-201ENST00000346162 IFIT1P09914 478 aaKnown RBP18.02■□□□□ 0.47
SRPK1-201ENST00000346162 METTL24Q5JXM2 366 aa18.02■□□□□ 0.47
SRPK1-201ENST00000346162 GBP3Q9H0R5 595 aa18.02■□□□□ 0.47
SRPK1-201ENST00000346162 ZMYM4Q5VZL5 1548 aa18.02■□□□□ 0.47
SRPK1-201ENST00000346162 LARP6Q9BRS8 491 aaKnown RBP18.02■□□□□ 0.47
SRPK1-201ENST00000346162 SLC3A2P08195 630 aaKnown RBP18.01■□□□□ 0.47
SRPK1-201ENST00000346162 IMMTQ16891 758 aaKnown RBP18.01■□□□□ 0.47
SRPK1-201ENST00000346162 PPP1R9BQ96SB3 815 aa18.01■□□□□ 0.47
SRPK1-201ENST00000346162 CCDC91Q7Z6B0 441 aa18.01■□□□□ 0.47
SRPK1-201ENST00000346162 IFNL2Q8IZJ0 200 aa18.01■□□□□ 0.47
SRPK1-201ENST00000346162 AKAP2Q9Y2D5 859 aa18.01■□□□□ 0.47
SRPK1-201ENST00000346162 KDM6BO15054 1643 aa18.01■□□□□ 0.47
SRPK1-201ENST00000346162 SMTNL1A8MU46 457 aa18.01■□□□□ 0.47
SRPK1-201ENST00000346162 PIBF1Q8WXW3 757 aa18.01■□□□□ 0.47
SRPK1-201ENST00000346162 TMOD3Q9NYL9 352 aa18.01■□□□□ 0.47
SRPK1-201ENST00000346162 CHPF2Q9P2E5 772 aa18.01■□□□□ 0.47
SRPK1-201ENST00000346162 CCDC69A6NI79 296 aa18■□□□□ 0.47
SRPK1-201ENST00000346162 BLMP54132 1417 aaPredicted RBP18■□□□□ 0.47
SRPK1-201ENST00000346162 SNW1Q13573 536 aaKnown RBP18■□□□□ 0.47
SRPK1-201ENST00000346162 CKAP2LQ8IYA6 745 aa18■□□□□ 0.47
SRPK1-201ENST00000346162 GTF3C6Q969F1 213 aa18■□□□□ 0.47
SRPK1-201ENST00000346162 CRACR2AQ9BSW2 395 aa18■□□□□ 0.47
SRPK1-201ENST00000346162 PTPRTO14522 1441 aa18■□□□□ 0.47
SRPK1-201ENST00000346162 FLT4P35916 1363 aa18■□□□□ 0.47
SRPK1-201ENST00000346162 KDM2BQ8NHM5 1336 aa18■□□□□ 0.47
SRPK1-201ENST00000346162 CDKL5O76039 1030 aa18■□□□□ 0.47
SRPK1-201ENST00000346162 SLU7O95391 586 aaKnown RBP18■□□□□ 0.47
SRPK1-201ENST00000346162 ATP8B2P98198 1209 aa18■□□□□ 0.47
SRPK1-201ENST00000346162 TICAM2Q86XR7 235 aa18■□□□□ 0.47
SRPK1-201ENST00000346162 CBFA2T2O43439 604 aa17.99■□□□□ 0.47
SRPK1-201ENST00000346162 C17orf53Q8N3J3 647 aaPredicted RBP17.99■□□□□ 0.47
SRPK1-201ENST00000346162 SMARCE1Q969G3 411 aa17.99■□□□□ 0.47
SRPK1-201ENST00000346162 UBE3BQ7Z3V4 1068 aa17.99■□□□□ 0.47
SRPK1-201ENST00000346162 NUP133Q8WUM0 1156 aa17.99■□□□□ 0.47
SRPK1-201ENST00000346162 SCAND2PQ9GZW5 306 aaPredicted RBP17.99■□□□□ 0.47
SRPK1-201ENST00000346162 CAPN2P17655 700 aa17.99■□□□□ 0.47
SRPK1-201ENST00000346162 CEP85Q6P2H3 762 aa17.99■□□□□ 0.47
SRPK1-201ENST00000346162 KRBA2Q6ZNG9 492 aa17.99■□□□□ 0.47
SRPK1-201ENST00000346162 TRIM35Q9UPQ4 493 aa17.99■□□□□ 0.47
SRPK1-201ENST00000346162 A0A1B0GUL7 405 aa17.98■□□□□ 0.47
SRPK1-201ENST00000346162 GIMAP6Q6P9H5 292 aa17.98■□□□□ 0.47
SRPK1-201ENST00000346162 GAS2L3Q86XJ1 694 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms