RNA–Protein interactions for RNA: ENST00000336596.6

EPHA3-201, Transcript of EPH receptor A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA3, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-201ENST00000336596 DDX17Q92841 729 aaKnown RBP8.66□□□□□ -1.02
EPHA3-201ENST00000336596 TNPO1Q92973 898 aaKnown RBP8.66□□□□□ -1.02
EPHA3-201ENST00000336596 NLRP3Q96P20 1036 aa8.66□□□□□ -1.02
EPHA3-201ENST00000336596 KIF22Q14807 665 aa8.65□□□□□ -1.02
EPHA3-201ENST00000336596 BTG4Q9NY30 223 aa8.65□□□□□ -1.02
EPHA3-201ENST00000336596 STXBP4Q6ZWJ1 553 aa8.65□□□□□ -1.02
EPHA3-201ENST00000336596 RPAP2Q8IXW5 612 aaPredicted RBP8.65□□□□□ -1.02
EPHA3-201ENST00000336596 FAM13BQ9NYF5 915 aa8.65□□□□□ -1.02
EPHA3-201ENST00000336596 PIK3C2GO75747 1445 aa8.65□□□□□ -1.02
EPHA3-201ENST00000336596 KAT6BQ8WYB5 2073 aa8.65□□□□□ -1.02
EPHA3-201ENST00000336596 POLR3AO14802 1390 aaPredicted RBP8.65□□□□□ -1.02
EPHA3-201ENST00000336596 SASS6Q6UVJ0 657 aa8.65□□□□□ -1.02
EPHA3-201ENST00000336596 CCP110O43303 1012 aa8.65□□□□□ -1.03
EPHA3-201ENST00000336596 TCIRG1Q13488 830 aa8.65□□□□□ -1.03
EPHA3-201ENST00000336596 BRDTQ58F21 947 aaPredicted RBP8.65□□□□□ -1.03
EPHA3-201ENST00000336596 TRPC5Q9UL62 973 aaPredicted RBP8.65□□□□□ -1.03
EPHA3-201ENST00000336596 TRAPPC3LQ5T215 181 aa8.65□□□□□ -1.03
EPHA3-201ENST00000336596 PDCL3Q9H2J4 239 aa8.65□□□□□ -1.03
EPHA3-201ENST00000336596 CROCC2H7BZ55 1655 aa8.65□□□□□ -1.03
EPHA3-201ENST00000336596 KDM5CP41229 1560 aa8.64□□□□□ -1.03
EPHA3-201ENST00000336596 PDE4BQ07343 736 aa8.64□□□□□ -1.03
EPHA3-201ENST00000336596 ALDH1L2Q3SY69 923 aa8.64□□□□□ -1.03
EPHA3-201ENST00000336596 ZSCAN31Q96LW9 406 aaPredicted RBP8.64□□□□□ -1.03
EPHA3-201ENST00000336596 PDZRN3Q9UPQ7 1066 aa8.64□□□□□ -1.03
EPHA3-201ENST00000336596 AKAP4Q5JQC9 854 aa8.64□□□□□ -1.03
EPHA3-201ENST00000336596 PYM1Q9BRP8 204 aaKnown RBP8.64□□□□□ -1.03
EPHA3-201ENST00000336596 SSFA2P28290 1259 aa8.64□□□□□ -1.03
EPHA3-201ENST00000336596 TMEM266Q2M3C6 531 aa8.64□□□□□ -1.03
EPHA3-201ENST00000336596 SSH1Q8WYL5 1049 aa8.64□□□□□ -1.03
EPHA3-201ENST00000336596 EYA1Q99502 592 aa8.64□□□□□ -1.03
EPHA3-201ENST00000336596 LRRC27Q9C0I9 530 aa8.64□□□□□ -1.03
EPHA3-201ENST00000336596 PTPRCP08575 1304 aa8.64□□□□□ -1.03
EPHA3-201ENST00000336596 HMGB1P09429 215 aaKnown RBP8.63□□□□□ -1.03
EPHA3-201ENST00000336596 KIF5BP33176 963 aa8.63□□□□□ -1.03
EPHA3-201ENST00000336596 IQCA1Q86XH1 822 aa8.63□□□□□ -1.03
EPHA3-201ENST00000336596 UTP14AQ9BVJ6 771 aaKnown RBP8.63□□□□□ -1.03
EPHA3-201ENST00000336596 CRNKL1Q9BZJ0 848 aaKnown RBP8.63□□□□□ -1.03
EPHA3-201ENST00000336596 LRRIQ1Q96JM4 1722 aa8.63□□□□□ -1.03
EPHA3-201ENST00000336596 UNC13BO14795 1591 aa8.63□□□□□ -1.03
EPHA3-201ENST00000336596 PER1O15534 1290 aaPredicted RBP8.63□□□□□ -1.03
EPHA3-201ENST00000336596 ZFYVE27Q5T4F4 411 aa8.63□□□□□ -1.03
EPHA3-201ENST00000336596 WDR78Q5VTH9 848 aa8.63□□□□□ -1.03
EPHA3-201ENST00000336596 ACSBG1Q96GR2 724 aa8.63□□□□□ -1.03
EPHA3-201ENST00000336596 SIL1Q9H173 461 aa8.63□□□□□ -1.03
EPHA3-201ENST00000336596 SLC5A4Q9NY91 659 aa8.63□□□□□ -1.03
EPHA3-201ENST00000336596 USP21Q9UK80 565 aa8.63□□□□□ -1.03
EPHA3-201ENST00000336596 PIK3R4Q99570 1358 aa8.63□□□□□ -1.03
EPHA3-201ENST00000336596 RBM19Q9Y4C8 960 aaKnown RBP8.63□□□□□ -1.03
EPHA3-201ENST00000336596 MAP3K9P80192 1104 aa8.63□□□□□ -1.03
EPHA3-201ENST00000336596 DPY19L2Q6NUT2 758 aa8.63□□□□□ -1.03
EPHA3-201ENST00000336596 AACSQ86V21 672 aa8.63□□□□□ -1.03
EPHA3-201ENST00000336596 MTMR7Q9Y216 660 aa8.63□□□□□ -1.03
EPHA3-201ENST00000336596 CYP46A1Q9Y6A2 500 aa8.63□□□□□ -1.03
EPHA3-201ENST00000336596 PLA2R1Q13018 1463 aa8.63□□□□□ -1.03
EPHA3-201ENST00000336596 DIP2BQ9P265 1576 aa8.63□□□□□ -1.03
EPHA3-201ENST00000336596 IL16Q14005 1332 aa8.63□□□□□ -1.03
EPHA3-201ENST00000336596 RARSP54136 660 aaKnown RBP8.62□□□□□ -1.03
EPHA3-201ENST00000336596 PDE4CQ08493 712 aa8.62□□□□□ -1.03
EPHA3-201ENST00000336596 NCBP1Q09161 790 aaKnown RBP8.62□□□□□ -1.03
EPHA3-201ENST00000336596 CCDC96Q2M329 555 aa8.62□□□□□ -1.03
EPHA3-201ENST00000336596 PARP10Q53GL7 1025 aa8.62□□□□□ -1.03
EPHA3-201ENST00000336596 MBIPQ9NS73 344 aa8.62□□□□□ -1.03
EPHA3-201ENST00000336596 SBNO1A3KN83 1393 aa8.62□□□□□ -1.03
EPHA3-201ENST00000336596 SBNO2Q9Y2G9 1366 aa8.62□□□□□ -1.03
EPHA3-201ENST00000336596 DIP2CQ9Y2E4 1556 aa8.62□□□□□ -1.03
EPHA3-201ENST00000336596 SRGAP3O43295 1099 aa8.62□□□□□ -1.03
EPHA3-201ENST00000336596 RXRBP28702 533 aa8.62□□□□□ -1.03
EPHA3-201ENST00000336596 CETN2P41208 172 aa8.62□□□□□ -1.03
EPHA3-201ENST00000336596 MYD88Q99836 296 aa8.62□□□□□ -1.03
EPHA3-201ENST00000336596 ACBD3Q9H3P7 528 aa8.62□□□□□ -1.03
EPHA3-201ENST00000336596 U3KPZ7 1027 aaPredicted RBP8.62□□□□□ -1.03
EPHA3-201ENST00000336596 GLI2P10070 1586 aa8.62□□□□□ -1.03
EPHA3-201ENST00000336596 ROBO2Q9HCK4 1378 aa8.62□□□□□ -1.03
EPHA3-201ENST00000336596 ZRSR2Q15696 482 aaKnown RBP8.62□□□□□ -1.03
EPHA3-201ENST00000336596 CTCFLQ8NI51 663 aaPredicted RBP8.62□□□□□ -1.03
EPHA3-201ENST00000336596 LRRC45Q96CN5 670 aa8.62□□□□□ -1.03
EPHA3-201ENST00000336596 A2ML1A8K2U0 1454 aa8.62□□□□□ -1.03
EPHA3-201ENST00000336596 MTHFSDQ2M296 383 aaKnown RBP8.62□□□□□ -1.03
EPHA3-201ENST00000336596 OTUD7BQ6GQQ9 843 aa8.62□□□□□ -1.03
EPHA3-201ENST00000336596 TMEM57Q8N5G2 664 aa8.62□□□□□ -1.03
EPHA3-201ENST00000336596 KIF1BPQ96EK5 621 aa8.62□□□□□ -1.03
EPHA3-201ENST00000336596 LPXNO60711 386 aa8.62□□□□□ -1.03
EPHA3-201ENST00000336596 PDE4AP27815 886 aa8.62□□□□□ -1.03
EPHA3-201ENST00000336596 FKBP4Q02790 459 aaKnown RBP eCLIP8.62□□□□□ -1.03
EPHA3-201ENST00000336596 CCDC39Q9UFE4 941 aa8.62□□□□□ -1.03
EPHA3-201ENST00000336596 LRRFIP2Q9Y608 721 aaKnown RBP8.62□□□□□ -1.03
EPHA3-201ENST00000336596 KDM5AP29375 1690 aaKnown RBP8.61□□□□□ -1.03
EPHA3-201ENST00000336596 ZNF335Q9H4Z2 1342 aaPredicted RBP8.61□□□□□ -1.03
EPHA3-201ENST00000336596 NPC1L1Q9UHC9 1359 aa8.61□□□□□ -1.03
EPHA3-201ENST00000336596 FGFR1OPO95684 399 aaKnown RBP8.61□□□□□ -1.03
EPHA3-201ENST00000336596 ZNHIT6Q9NWK9 470 aaKnown RBP8.61□□□□□ -1.03
EPHA3-201ENST00000336596 CEP152O94986 1710 aa8.61□□□□□ -1.03
EPHA3-201ENST00000336596 DNAAF4Q8WXU2 420 aa8.61□□□□□ -1.03
EPHA3-201ENST00000336596 CCDC85AQ96PX6 553 aaPredicted RBP8.61□□□□□ -1.03
EPHA3-201ENST00000336596 RNF17Q9BXT8 1623 aaKnown RBP8.61□□□□□ -1.03
EPHA3-201ENST00000336596 MAP3K4Q9Y6R4 1608 aa8.61□□□□□ -1.03
EPHA3-201ENST00000336596 H0YIN7 160 aa8.6□□□□□ -1.03
EPHA3-201ENST00000336596 NAP1L4Q99733 375 aaKnown RBP8.6□□□□□ -1.03
EPHA3-201ENST00000336596 PNMA2Q9UL42 364 aa8.6□□□□□ -1.03
EPHA3-201ENST00000336596 CLTCL1P53675 1640 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms