RNA–Protein interactions for RNA: ENST00000332281.5

SNAI3-201, Transcript of snail family transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAI3, Length 1,732 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3-201ENST00000332281 SSH3Q8TE77 659 aa23.58■■□□□ 1.37
SNAI3-201ENST00000332281 METTL22Q9BUU2 404 aaPredicted RBP23.58■■□□□ 1.37
SNAI3-201ENST00000332281 UTYO14607 1347 aa23.58■■□□□ 1.36
SNAI3-201ENST00000332281 CWF19L2Q2TBE0 894 aaKnown RBP23.56■■□□□ 1.36
SNAI3-201ENST00000332281 POLA2Q14181 598 aa23.56■■□□□ 1.36
SNAI3-201ENST00000332281 POTEAQ6S8J7 498 aa23.56■■□□□ 1.36
SNAI3-201ENST00000332281 KRT27Q7Z3Y8 459 aa23.56■■□□□ 1.36
SNAI3-201ENST00000332281 NPM2Q86SE8 214 aaKnown RBP23.56■■□□□ 1.36
SNAI3-201ENST00000332281 NBPF26B4DH59 902 aa23.55■■□□□ 1.36
SNAI3-201ENST00000332281 GRM8O00222 908 aa23.55■■□□□ 1.36
SNAI3-201ENST00000332281 MTX1Q13505 466 aa23.55■■□□□ 1.36
SNAI3-201ENST00000332281 NBPF14Q5TI25 921 aa23.55■■□□□ 1.36
SNAI3-201ENST00000332281 NBPF10Q6P3W6 841 aaKnown RBP23.55■■□□□ 1.36
SNAI3-201ENST00000332281 ILDR1Q86SU0 546 aaPredicted RBP23.55■■□□□ 1.36
SNAI3-201ENST00000332281 NBPF15Q8N660 670 aa23.55■■□□□ 1.36
SNAI3-201ENST00000332281 PLBD2Q8NHP8 589 aa23.55■■□□□ 1.36
SNAI3-201ENST00000332281 RBM42Q9BTD8 480 aaKnown RBP23.55■■□□□ 1.36
SNAI3-201ENST00000332281 BRWD3Q6RI45 1802 aa23.54■■□□□ 1.36
SNAI3-201ENST00000332281 IGKV5-2P06315 115 aa23.54■■□□□ 1.36
SNAI3-201ENST00000332281 PPP1R42Q7Z4L9 355 aa23.54■■□□□ 1.36
SNAI3-201ENST00000332281 PLEKHM2Q8IWE5 1019 aa23.54■■□□□ 1.36
SNAI3-201ENST00000332281 NEURL1BA8MQ27 555 aa23.53■■□□□ 1.36
SNAI3-201ENST00000332281 PIP4K2AP48426 406 aaPredicted RBP23.53■■□□□ 1.36
SNAI3-201ENST00000332281 IPO9Q96P70 1041 aaKnown RBP23.53■■□□□ 1.36
SNAI3-201ENST00000332281 AFDNP55196 1824 aaKnown RBP23.53■■□□□ 1.36
SNAI3-201ENST00000332281 PTF1AQ7RTS3 328 aa23.52■■□□□ 1.36
SNAI3-201ENST00000332281 MYD88Q99836 296 aa23.52■■□□□ 1.36
SNAI3-201ENST00000332281 LRRCC1Q9C099 1032 aa23.52■■□□□ 1.36
SNAI3-201ENST00000332281 EXOC6BQ9Y2D4 811 aa23.52■■□□□ 1.36
SNAI3-201ENST00000332281 NUP188Q5SRE5 1749 aa23.52■■□□□ 1.36
SNAI3-201ENST00000332281 SRGAP3O43295 1099 aa23.51■■□□□ 1.35
SNAI3-201ENST00000332281 A1BGP04217 495 aa23.51■■□□□ 1.35
SNAI3-201ENST00000332281 GCKRQ14397 625 aa23.51■■□□□ 1.35
SNAI3-201ENST00000332281 RAB11FIP3O75154 756 aa23.5■■□□□ 1.35
SNAI3-201ENST00000332281 UPF2Q9HAU5 1272 aaKnown RBP23.5■■□□□ 1.35
SNAI3-201ENST00000332281 APBB1O00213 710 aa23.5■■□□□ 1.35
SNAI3-201ENST00000332281 STARD3NLO95772 234 aa23.5■■□□□ 1.35
SNAI3-201ENST00000332281 SMARCA5O60264 1052 aaPredicted RBP23.49■■□□□ 1.35
SNAI3-201ENST00000332281 SEC24BO95487 1268 aa23.48■■□□□ 1.35
SNAI3-201ENST00000332281 HSP90AB4PQ58FF6 505 aa23.48■■□□□ 1.35
SNAI3-201ENST00000332281 FAM196AQ6ZSG2 479 aa23.48■■□□□ 1.35
SNAI3-201ENST00000332281 DNAJC10Q8IXB1 793 aa23.47■■□□□ 1.35
SNAI3-201ENST00000332281 C16orf71Q8IYS4 520 aaPredicted RBP23.47■■□□□ 1.35
SNAI3-201ENST00000332281 TTC22Q5TAA0 569 aa23.47■■□□□ 1.35
SNAI3-201ENST00000332281 SMARCC1Q92922 1105 aaPredicted RBP23.47■■□□□ 1.35
SNAI3-201ENST00000332281 DDRGK1Q96HY6 314 aa23.47■■□□□ 1.35
SNAI3-201ENST00000332281 SLC4A9Q96Q91 983 aa23.47■■□□□ 1.35
SNAI3-201ENST00000332281 OSBPL3Q9H4L5 887 aa23.47■■□□□ 1.35
SNAI3-201ENST00000332281 COL15A1P39059 1388 aa23.47■■□□□ 1.35
SNAI3-201ENST00000332281 SURF6O75683 361 aaKnown RBP23.46■■□□□ 1.35
SNAI3-201ENST00000332281 NOP58Q9Y2X3 529 aaKnown RBP23.46■■□□□ 1.35
SNAI3-201ENST00000332281 SBF2Q86WG5 1849 aa23.45■■□□□ 1.35
SNAI3-201ENST00000332281 SUCLG2Q96I99 432 aa23.45■■□□□ 1.34
SNAI3-201ENST00000332281 PALLDQ8WX93 1383 aa23.45■■□□□ 1.34
SNAI3-201ENST00000332281 TTLL7Q6ZT98 887 aa23.45■■□□□ 1.34
SNAI3-201ENST00000332281 TJP1Q07157 1748 aa23.44■■□□□ 1.34
SNAI3-201ENST00000332281 NHSQ6T4R5 1651 aa23.44■■□□□ 1.34
SNAI3-201ENST00000332281 MSH5O43196 834 aa23.44■■□□□ 1.34
SNAI3-201ENST00000332281 OTUD7AQ8TE49 926 aaPredicted RBP23.44■■□□□ 1.34
SNAI3-201ENST00000332281 KAZALD1Q96I82 304 aa23.44■■□□□ 1.34
SNAI3-201ENST00000332281 LOC102724428A0A0B4J2F2 783 aa23.43■■□□□ 1.34
SNAI3-201ENST00000332281 GSPT1P15170 499 aaKnown RBP23.43■■□□□ 1.34
SNAI3-201ENST00000332281 SIK1P57059 783 aa23.43■■□□□ 1.34
SNAI3-201ENST00000332281 KIF1BPQ96EK5 621 aa23.43■■□□□ 1.34
SNAI3-201ENST00000332281 BICC1Q9H694 974 aaKnown RBP23.43■■□□□ 1.34
SNAI3-201ENST00000332281 SALL3Q9BXA9 1300 aa23.43■■□□□ 1.34
SNAI3-201ENST00000332281 CICQ96RK0 1608 aaPredicted RBP23.42■■□□□ 1.34
SNAI3-201ENST00000332281 ATP6V1AP38606 617 aa23.42■■□□□ 1.34
SNAI3-201ENST00000332281 BCL11BQ9C0K0 894 aaPredicted RBP23.42■■□□□ 1.34
SNAI3-201ENST00000332281 BTAF1O14981 1849 aa23.42■■□□□ 1.34
SNAI3-201ENST00000332281 CYP19A1P11511 503 aaPredicted RBP23.42■■□□□ 1.34
SNAI3-201ENST00000332281 PDE1AP54750 535 aa23.42■■□□□ 1.34
SNAI3-201ENST00000332281 EIF5BO60841 1220 aaKnown RBP23.41■■□□□ 1.34
SNAI3-201ENST00000332281 TRIM37O94972 964 aa23.41■■□□□ 1.34
SNAI3-201ENST00000332281 RHPN1Q8TCX5 695 aa23.41■■□□□ 1.34
SNAI3-201ENST00000332281 A0A087WZG4 1122 aa23.4■■□□□ 1.34
SNAI3-201ENST00000332281 ATP5J2-PTCD1G3V325 749 aa23.4■■□□□ 1.34
SNAI3-201ENST00000332281 CDC45O75419 566 aa23.4■■□□□ 1.34
SNAI3-201ENST00000332281 CCDC191Q8NCU4 936 aa23.4■■□□□ 1.34
SNAI3-201ENST00000332281 TBC1D32Q96NH3 1257 aa23.4■■□□□ 1.34
SNAI3-201ENST00000332281 ERC1Q8IUD2 1116 aa23.39■■□□□ 1.34
SNAI3-201ENST00000332281 BCL11AQ9H165 835 aa23.39■■□□□ 1.34
SNAI3-201ENST00000332281 ZBTB3Q9H5J0 574 aa23.39■■□□□ 1.34
SNAI3-201ENST00000332281 CWC25Q9NXE8 425 aaPredicted RBP23.39■■□□□ 1.34
SNAI3-201ENST00000332281 STAP2Q9UGK3 403 aa23.39■■□□□ 1.34
SNAI3-201ENST00000332281 MX1P20591 662 aa23.39■■□□□ 1.33
SNAI3-201ENST00000332281 KIF6Q6ZMV9 814 aa23.39■■□□□ 1.33
SNAI3-201ENST00000332281 AOX1Q06278 1338 aa23.39■■□□□ 1.33
SNAI3-201ENST00000332281 EP400Q96L91 3159 aa23.38■■□□□ 1.33
SNAI3-201ENST00000332281 UBE3BQ7Z3V4 1068 aa23.38■■□□□ 1.33
SNAI3-201ENST00000332281 TUBGCP6Q96RT7 1819 aa23.38■■□□□ 1.33
SNAI3-201ENST00000332281 H7C1W4 665 aa23.37■■□□□ 1.33
SNAI3-201ENST00000332281 CASP7P55210 303 aa23.37■■□□□ 1.33
SNAI3-201ENST00000332281 KCNQ4P56696 695 aa23.37■■□□□ 1.33
SNAI3-201ENST00000332281 ITPK1Q13572 414 aa23.37■■□□□ 1.33
SNAI3-201ENST00000332281 RABL6Q3YEC7 729 aaPredicted RBP23.37■■□□□ 1.33
SNAI3-201ENST00000332281 MFAP1P55081 439 aaKnown RBP23.36■■□□□ 1.33
SNAI3-201ENST00000332281 TBC1D9Q6ZT07 1266 aa23.36■■□□□ 1.33
SNAI3-201ENST00000332281 ZNF831Q5JPB2 1677 aa23.36■■□□□ 1.33
SNAI3-201ENST00000332281 TRIM28Q13263 835 aaKnown RBP23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms