RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 ARXQ96QS3 562 aa13.97□□□□□ -0.17
SCG2-201ENST00000305409 ASAP1Q9ULH1 1129 aa13.97□□□□□ -0.17
SCG2-201ENST00000305409 ZBTB3Q9H5J0 574 aa13.97□□□□□ -0.17
SCG2-201ENST00000305409 ERC2O15083 957 aa13.96□□□□□ -0.17
SCG2-201ENST00000305409 PIP4K2BP78356 416 aa13.96□□□□□ -0.17
SCG2-201ENST00000305409 SYTL4Q96C24 671 aaPredicted RBP13.96□□□□□ -0.17
SCG2-201ENST00000305409 NUTM2BA6NNL0 878 aaPredicted RBP13.96□□□□□ -0.17
SCG2-201ENST00000305409 NUTM2EB1AL46 878 aaPredicted RBP13.96□□□□□ -0.17
SCG2-201ENST00000305409 ERVV-2B6SEH9 535 aa13.96□□□□□ -0.17
SCG2-201ENST00000305409 NUTM2AQ8IVF1 878 aaPredicted RBP13.96□□□□□ -0.17
SCG2-201ENST00000305409 STAP2Q9UGK3 403 aa13.96□□□□□ -0.17
SCG2-201ENST00000305409 CHMLP26374 656 aa13.95□□□□□ -0.18
SCG2-201ENST00000305409 PI4K2BQ8TCG2 481 aa13.95□□□□□ -0.18
SCG2-201ENST00000305409 CCDC8Q9H0W5 538 aaPredicted RBP13.95□□□□□ -0.18
SCG2-201ENST00000305409 A0A087WZG4 1122 aa13.95□□□□□ -0.18
SCG2-201ENST00000305409 PIGBQ92521 554 aa13.95□□□□□ -0.18
SCG2-201ENST00000305409 TMOD3Q9NYL9 352 aa13.95□□□□□ -0.18
SCG2-201ENST00000305409 MTX1Q13505 466 aa13.94□□□□□ -0.18
SCG2-201ENST00000305409 AACSQ86V21 672 aa13.94□□□□□ -0.18
SCG2-201ENST00000305409 ESYT1Q9BSJ8 1104 aa13.94□□□□□ -0.18
SCG2-201ENST00000305409 ANO2Q9NQ90 1003 aa13.94□□□□□ -0.18
SCG2-201ENST00000305409 SASH1O94885 1247 aa13.94□□□□□ -0.18
SCG2-201ENST00000305409 HSP90AA1P07900 732 aaKnown RBP13.94□□□□□ -0.18
SCG2-201ENST00000305409 NKX1-1Q15270 411 aaPredicted RBP13.94□□□□□ -0.18
SCG2-201ENST00000305409 TLR7Q9NYK1 1049 aaKnown RBP13.94□□□□□ -0.18
SCG2-201ENST00000305409 MRC1P22897 1456 aa13.94□□□□□ -0.18
SCG2-201ENST00000305409 G3BP1Q13283 466 aaKnown RBP eCLIP13.93□□□□□ -0.18
SCG2-201ENST00000305409 CLASRPQ8N2M8 674 aaKnown RBP13.93□□□□□ -0.18
SCG2-201ENST00000305409 SNX21Q969T3 373 aa13.93□□□□□ -0.18
SCG2-201ENST00000305409 CHMP3Q9Y3E7 222 aa13.93□□□□□ -0.18
SCG2-201ENST00000305409 PKD1L3Q7Z443 1732 aa13.93□□□□□ -0.18
SCG2-201ENST00000305409 ABCC6O95255 1503 aa13.93□□□□□ -0.18
SCG2-201ENST00000305409 REC8O95072 547 aa13.93□□□□□ -0.18
SCG2-201ENST00000305409 CCDC9Q9Y3X0 531 aaKnown RBP13.93□□□□□ -0.18
SCG2-201ENST00000305409 IFIT2P09913 472 aaKnown RBP13.92□□□□□ -0.18
SCG2-201ENST00000305409 HSP90AB4PQ58FF6 505 aa13.92□□□□□ -0.18
SCG2-201ENST00000305409 DNAJC10Q8IXB1 793 aa13.92□□□□□ -0.18
SCG2-201ENST00000305409 EAF2Q96CJ1 260 aaPredicted RBP13.92□□□□□ -0.18
SCG2-201ENST00000305409 PALD1Q9ULE6 856 aa13.92□□□□□ -0.18
SCG2-201ENST00000305409 UTYO14607 1347 aa13.92□□□□□ -0.18
SCG2-201ENST00000305409 PLBD2Q8NHP8 589 aa13.92□□□□□ -0.18
SCG2-201ENST00000305409 K7ELQ4 463 aaPredicted RBP13.91□□□□□ -0.18
SCG2-201ENST00000305409 N4BP2Q86UW6 1770 aaPredicted RBP13.91□□□□□ -0.18
SCG2-201ENST00000305409 NOL8Q76FK4 1167 aaKnown RBP13.91□□□□□ -0.18
SCG2-201ENST00000305409 CWC27Q6UX04 472 aaKnown RBP13.9□□□□□ -0.18
SCG2-201ENST00000305409 ABCA3Q99758 1704 aa13.9□□□□□ -0.18
SCG2-201ENST00000305409 ATG3Q9NT62 314 aa13.9□□□□□ -0.18
SCG2-201ENST00000305409 CHMP5Q9NZZ3 219 aa13.9□□□□□ -0.18
SCG2-201ENST00000305409 RABEP1Q15276 862 aa13.89□□□□□ -0.19
SCG2-201ENST00000305409 LMBR1LQ6UX01 489 aa13.89□□□□□ -0.19
SCG2-201ENST00000305409 CCDC85AQ96PX6 553 aaPredicted RBP13.89□□□□□ -0.19
SCG2-201ENST00000305409 NDUFB9Q9Y6M9 179 aa13.89□□□□□ -0.19
SCG2-201ENST00000305409 NHSL1Q5SYE7 1610 aa13.89□□□□□ -0.19
SCG2-201ENST00000305409 BOLA2Q9H3K6 86 aa13.89□□□□□ -0.19
SCG2-201ENST00000305409 HDAC5Q9UQL6 1122 aa13.89□□□□□ -0.19
SCG2-201ENST00000305409 EXOC5O00471 708 aa13.88□□□□□ -0.19
SCG2-201ENST00000305409 ACSBG1Q96GR2 724 aa13.88□□□□□ -0.19
SCG2-201ENST00000305409 ECHDC1Q9NTX5 307 aa13.88□□□□□ -0.19
SCG2-201ENST00000305409 PRIM1P49642 420 aaKnown RBP13.88□□□□□ -0.19
SCG2-201ENST00000305409 PTPN12Q05209 780 aaKnown RBP13.88□□□□□ -0.19
SCG2-201ENST00000305409 CNTROBQ8N137 903 aa13.88□□□□□ -0.19
SCG2-201ENST00000305409 EDC3Q96F86 508 aaKnown RBP13.88□□□□□ -0.19
SCG2-201ENST00000305409 SLC4A9Q96Q91 983 aa13.88□□□□□ -0.19
SCG2-201ENST00000305409 ROBO1Q9Y6N7 1651 aa13.88□□□□□ -0.19
SCG2-201ENST00000305409 PARP4Q9UKK3 1724 aaKnown RBP13.87□□□□□ -0.19
SCG2-201ENST00000305409 NEK4P51957 841 aa13.87□□□□□ -0.19
SCG2-201ENST00000305409 CASP7P55210 303 aa13.87□□□□□ -0.19
SCG2-201ENST00000305409 TFCP2Q12800 502 aa13.87□□□□□ -0.19
SCG2-201ENST00000305409 GLI3P10071 1580 aa13.87□□□□□ -0.19
SCG2-201ENST00000305409 KCPQ6ZWJ8 1503 aa13.87□□□□□ -0.19
SCG2-201ENST00000305409 GLRX3O76003 335 aaKnown RBP13.87□□□□□ -0.19
SCG2-201ENST00000305409 RFX5P48382 616 aaPredicted RBP13.87□□□□□ -0.19
SCG2-201ENST00000305409 ERC1Q8IUD2 1116 aa13.87□□□□□ -0.19
SCG2-201ENST00000305409 SYNE4Q8N205 404 aa13.87□□□□□ -0.19
SCG2-201ENST00000305409 ZNF594Q96JF6 807 aaPredicted RBP13.87□□□□□ -0.19
SCG2-201ENST00000305409 UPF3BQ9BZI7 483 aaKnown RBP13.87□□□□□ -0.19
SCG2-201ENST00000305409 AOX1Q06278 1338 aa13.87□□□□□ -0.19
SCG2-201ENST00000305409 CWC25Q9NXE8 425 aaPredicted RBP13.86□□□□□ -0.19
SCG2-201ENST00000305409 GPTP24298 496 aa13.85□□□□□ -0.19
SCG2-201ENST00000305409 DDIT3P35638 169 aa13.85□□□□□ -0.19
SCG2-201ENST00000305409 FOXO4P98177 505 aa13.85□□□□□ -0.19
SCG2-201ENST00000305409 PLEKHG2Q9H7P9 1386 aa13.85□□□□□ -0.19
SCG2-201ENST00000305409 CHGBP05060 677 aa13.85□□□□□ -0.19
SCG2-201ENST00000305409 ZGPATQ8N5A5 531 aaKnown RBP13.85□□□□□ -0.19
SCG2-201ENST00000305409 TTC41PQ6P2S7 1318 aa13.85□□□□□ -0.19
SCG2-201ENST00000305409 H7C1W4 665 aa13.84□□□□□ -0.19
SCG2-201ENST00000305409 HLFQ16534 295 aa13.84□□□□□ -0.19
SCG2-201ENST00000305409 FAM89AQ96GI7 184 aa13.84□□□□□ -0.19
SCG2-201ENST00000305409 LARP6Q9BRS8 491 aaKnown RBP13.84□□□□□ -0.19
SCG2-201ENST00000305409 DIAPH3Q9NSV4 1193 aa13.84□□□□□ -0.19
SCG2-201ENST00000305409 SHANK3Q9BYB0 1731 aa13.84□□□□□ -0.19
SCG2-201ENST00000305409 SGSM2O43147 1006 aa13.84□□□□□ -0.19
SCG2-201ENST00000305409 TNPO1Q92973 898 aaKnown RBP13.84□□□□□ -0.19
SCG2-201ENST00000305409 GPATCH3Q96I76 525 aa13.84□□□□□ -0.19
SCG2-201ENST00000305409 FAM227BQ96M60 508 aa13.84□□□□□ -0.19
SCG2-201ENST00000305409 ST18O60284 1047 aa13.83□□□□□ -0.19
SCG2-201ENST00000305409 MCM4P33991 863 aa13.83□□□□□ -0.19
SCG2-201ENST00000305409 GSE1Q14687 1217 aa13.83□□□□□ -0.19
SCG2-201ENST00000305409 RABL6Q3YEC7 729 aaPredicted RBP13.83□□□□□ -0.19
SCG2-201ENST00000305409 COPRSQ9NQ92 184 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms