RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 SMARCA5O60264 1052 aaPredicted RBP27.39■■□□□ 1.98
CCDC7-201ENST00000277657 SEC24BO95487 1268 aa27.39■■□□□ 1.98
CCDC7-201ENST00000277657 GCKRQ14397 625 aa27.38■■□□□ 1.97
CCDC7-201ENST00000277657 C16orf71Q8IYS4 520 aaPredicted RBP27.38■■□□□ 1.97
CCDC7-201ENST00000277657 KAT6BQ8WYB5 2073 aa27.38■■□□□ 1.97
CCDC7-201ENST00000277657 SRGAP3O43295 1099 aa27.38■■□□□ 1.97
CCDC7-201ENST00000277657 DNAJC10Q8IXB1 793 aa27.38■■□□□ 1.97
CCDC7-201ENST00000277657 APBB1O00213 710 aa27.37■■□□□ 1.97
CCDC7-201ENST00000277657 SYTL4Q96C24 671 aaPredicted RBP27.36■■□□□ 1.97
CCDC7-201ENST00000277657 RBM42Q9BTD8 480 aaKnown RBP27.36■■□□□ 1.97
CCDC7-201ENST00000277657 LRRCC1Q9C099 1032 aa27.36■■□□□ 1.97
CCDC7-201ENST00000277657 AFDNP55196 1824 aaKnown RBP27.36■■□□□ 1.97
CCDC7-201ENST00000277657 TTLL7Q6ZT98 887 aa27.36■■□□□ 1.97
CCDC7-201ENST00000277657 KAZALD1Q96I82 304 aa27.36■■□□□ 1.97
CCDC7-201ENST00000277657 SLC4A9Q96Q91 983 aa27.36■■□□□ 1.97
CCDC7-201ENST00000277657 STARD3NLO95772 234 aa27.35■■□□□ 1.97
CCDC7-201ENST00000277657 OTUD7AQ8TE49 926 aaPredicted RBP27.35■■□□□ 1.97
CCDC7-201ENST00000277657 SUCLG2Q96I99 432 aa27.34■■□□□ 1.97
CCDC7-201ENST00000277657 IPO9Q96P70 1041 aaKnown RBP27.34■■□□□ 1.97
CCDC7-201ENST00000277657 HSPA1LP34931 641 aa27.34■■□□□ 1.97
CCDC7-201ENST00000277657 FAM98CQ17RN3 349 aaKnown RBP27.34■■□□□ 1.97
CCDC7-201ENST00000277657 RAB11FIP3O75154 756 aa27.33■■□□□ 1.97
CCDC7-201ENST00000277657 MSH5O43196 834 aa27.32■■□□□ 1.96
CCDC7-201ENST00000277657 TJP1Q07157 1748 aa27.32■■□□□ 1.96
CCDC7-201ENST00000277657 TTC22Q5TAA0 569 aa27.32■■□□□ 1.96
CCDC7-201ENST00000277657 USP21Q9UK80 565 aa27.32■■□□□ 1.96
CCDC7-201ENST00000277657 NOP58Q9Y2X3 529 aaKnown RBP27.32■■□□□ 1.96
CCDC7-201ENST00000277657 COL15A1P39059 1388 aa27.32■■□□□ 1.96
CCDC7-201ENST00000277657 SALL3Q9BXA9 1300 aa27.31■■□□□ 1.96
CCDC7-201ENST00000277657 SURF6O75683 361 aaKnown RBP27.31■■□□□ 1.96
CCDC7-201ENST00000277657 CYP19A1P11511 503 aaPredicted RBP27.31■■□□□ 1.96
CCDC7-201ENST00000277657 GSPT1P15170 499 aaKnown RBP27.31■■□□□ 1.96
CCDC7-201ENST00000277657 OSBPL3Q9H4L5 887 aa27.31■■□□□ 1.96
CCDC7-201ENST00000277657 BICC1Q9H694 974 aaKnown RBP27.3■■□□□ 1.96
CCDC7-201ENST00000277657 ATP5J2-PTCD1G3V325 749 aa27.29■■□□□ 1.96
CCDC7-201ENST00000277657 HSP90AB4PQ58FF6 505 aa27.28■■□□□ 1.96
CCDC7-201ENST00000277657 ACSBG1Q96GR2 724 aa27.28■■□□□ 1.96
CCDC7-201ENST00000277657 THSD7AQ9UPZ6 1657 aa27.27■■□□□ 1.96
CCDC7-201ENST00000277657 ZBTB3Q9H5J0 574 aa27.27■■□□□ 1.96
CCDC7-201ENST00000277657 CICQ96RK0 1608 aaPredicted RBP27.26■■□□□ 1.96
CCDC7-201ENST00000277657 PDE1AP54750 535 aa27.26■■□□□ 1.95
CCDC7-201ENST00000277657 CASP7P55210 303 aa27.26■■□□□ 1.95
CCDC7-201ENST00000277657 BCL11AQ9H165 835 aa27.26■■□□□ 1.95
CCDC7-201ENST00000277657 UPF2Q9HAU5 1272 aaKnown RBP27.26■■□□□ 1.95
CCDC7-201ENST00000277657 RHPN1Q8TCX5 695 aa27.25■■□□□ 1.95
CCDC7-201ENST00000277657 KIF1BPQ96EK5 621 aa27.25■■□□□ 1.95
CCDC7-201ENST00000277657 A0A087WZG4 1122 aa27.25■■□□□ 1.95
CCDC7-201ENST00000277657 CCDC191Q8NCU4 936 aa27.24■■□□□ 1.95
CCDC7-201ENST00000277657 CWC25Q9NXE8 425 aaPredicted RBP27.24■■□□□ 1.95
CCDC7-201ENST00000277657 H7C1W4 665 aa27.23■■□□□ 1.95
CCDC7-201ENST00000277657 EPHA10Q5JZY3 1008 aa27.23■■□□□ 1.95
CCDC7-201ENST00000277657 UBE3BQ7Z3V4 1068 aa27.23■■□□□ 1.95
CCDC7-201ENST00000277657 TBC1D32Q96NH3 1257 aa27.23■■□□□ 1.95
CCDC7-201ENST00000277657 STAP2Q9UGK3 403 aa27.23■■□□□ 1.95
CCDC7-201ENST00000277657 RABL6Q3YEC7 729 aaPredicted RBP27.23■■□□□ 1.95
CCDC7-201ENST00000277657 MEX3CQ5U5Q3 659 aaKnown RBP27.22■■□□□ 1.95
CCDC7-201ENST00000277657 DDRGK1Q96HY6 314 aa27.22■■□□□ 1.95
CCDC7-201ENST00000277657 ISCA1Q9BUE6 129 aa27.22■■□□□ 1.95
CCDC7-201ENST00000277657 MX1P20591 662 aa27.21■■□□□ 1.95
CCDC7-201ENST00000277657 KIF6Q6ZMV9 814 aa27.21■■□□□ 1.95
CCDC7-201ENST00000277657 TBC1D9Q6ZT07 1266 aa27.21■■□□□ 1.95
CCDC7-201ENST00000277657 ZBTB1Q9Y2K1 713 aa27.21■■□□□ 1.95
CCDC7-201ENST00000277657 CDC45O75419 566 aa27.21■■□□□ 1.95
CCDC7-201ENST00000277657 TCIRG1Q13488 830 aa27.21■■□□□ 1.95
CCDC7-201ENST00000277657 IL1RAPL2Q9NP60 686 aa27.21■■□□□ 1.95
CCDC7-201ENST00000277657 TUBGCP6Q96RT7 1819 aa27.2■■□□□ 1.95
CCDC7-201ENST00000277657 MAP3K15Q6ZN16 1313 aa27.2■■□□□ 1.94
CCDC7-201ENST00000277657 TRIM28Q13263 835 aaKnown RBP27.2■■□□□ 1.94
CCDC7-201ENST00000277657 AOX1Q06278 1338 aa27.19■■□□□ 1.94
CCDC7-201ENST00000277657 LOC102724428A0A0B4J2F2 783 aa27.19■■□□□ 1.94
CCDC7-201ENST00000277657 KCNQ2O43526 872 aa27.19■■□□□ 1.94
CCDC7-201ENST00000277657 IL6STP40189 918 aaPredicted RBP27.19■■□□□ 1.94
CCDC7-201ENST00000277657 SIK1P57059 783 aa27.19■■□□□ 1.94
CCDC7-201ENST00000277657 ERC1Q8IUD2 1116 aa27.19■■□□□ 1.94
CCDC7-201ENST00000277657 JARID2Q92833 1246 aaPredicted RBP27.19■■□□□ 1.94
CCDC7-201ENST00000277657 SMARCC1Q92922 1105 aaPredicted RBP27.19■■□□□ 1.94
CCDC7-201ENST00000277657 PA2G4Q9UQ80 394 aaKnown RBP27.19■■□□□ 1.94
CCDC7-201ENST00000277657 ZNF330Q9Y3S2 320 aaPredicted RBP27.19■■□□□ 1.94
CCDC7-201ENST00000277657 PALLDQ8WX93 1383 aa27.19■■□□□ 1.94
CCDC7-201ENST00000277657 A0A0G2JS52 829 aa27.19■■□□□ 1.94
CCDC7-201ENST00000277657 SDSP20132 328 aa27.19■■□□□ 1.94
CCDC7-201ENST00000277657 RREB1Q92766 1687 aa27.19■■□□□ 1.94
CCDC7-201ENST00000277657 AFF2P51816 1311 aa27.18■■□□□ 1.94
CCDC7-201ENST00000277657 ZNF831Q5JPB2 1677 aa27.18■■□□□ 1.94
CCDC7-201ENST00000277657 MFAP1P55081 439 aaKnown RBP27.18■■□□□ 1.94
CCDC7-201ENST00000277657 GJD4Q96KN9 370 aaPredicted RBP27.18■■□□□ 1.94
CCDC7-201ENST00000277657 ATRNO75882 1429 aa27.17■■□□□ 1.94
CCDC7-201ENST00000277657 ATP6V1AP38606 617 aa27.17■■□□□ 1.94
CCDC7-201ENST00000277657 OS9Q13438 667 aaPredicted RBP27.17■■□□□ 1.94
CCDC7-201ENST00000277657 GIGYF2Q6Y7W6 1299 aaKnown RBP27.17■■□□□ 1.94
CCDC7-201ENST00000277657 RFX5P48382 616 aaPredicted RBP27.15■■□□□ 1.94
CCDC7-201ENST00000277657 FOXO4P98177 505 aa27.15■■□□□ 1.94
CCDC7-201ENST00000277657 MYT1Q01538 1121 aa27.15■■□□□ 1.94
CCDC7-201ENST00000277657 INTS5Q6P9B9 1019 aaKnown RBP27.15■■□□□ 1.94
CCDC7-201ENST00000277657 COPRSQ9NQ92 184 aa27.15■■□□□ 1.94
CCDC7-201ENST00000277657 ITPK1Q13572 414 aa27.14■■□□□ 1.94
CCDC7-201ENST00000277657 C22orf23Q9BZE7 217 aa27.14■■□□□ 1.94
CCDC7-201ENST00000277657 CCDC87Q9NVE4 849 aa27.14■■□□□ 1.94
CCDC7-201ENST00000277657 ANKRD36CQ5JPF3 1778 aa27.13■■□□□ 1.93
CCDC7-201ENST00000277657 ONECUT3O60422 494 aaPredicted RBP27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms