RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 LRP10Q7Z4F1 713 aa34.27■■■■□ 3.08
CCM2-201ENST00000258781 SLC4A9Q96Q91 983 aa34.27■■■■□ 3.08
CCM2-201ENST00000258781 RBM42Q9BTD8 480 aaKnown RBP34.27■■■■□ 3.08
CCM2-201ENST00000258781 NHSQ6T4R5 1651 aa34.27■■■■□ 3.08
CCM2-201ENST00000258781 SMARCA5O60264 1052 aaPredicted RBP34.27■■■■□ 3.08
CCM2-201ENST00000258781 POLA2Q14181 598 aa34.27■■■■□ 3.08
CCM2-201ENST00000258781 TTC22Q5TAA0 569 aa34.26■■■■□ 3.07
CCM2-201ENST00000258781 TJP1Q07157 1748 aa34.25■■■■□ 3.07
CCM2-201ENST00000258781 MYL6BP14649 208 aa34.25■■■■□ 3.07
CCM2-201ENST00000258781 AIMP1Q12904 312 aaKnown RBP34.25■■■■□ 3.07
CCM2-201ENST00000258781 C16orf71Q8IYS4 520 aaPredicted RBP34.25■■■■□ 3.07
CCM2-201ENST00000258781 XAGE3Q8WTP9 111 aa34.25■■■■□ 3.07
CCM2-201ENST00000258781 EXOC6BQ9Y2D4 811 aa34.25■■■■□ 3.07
CCM2-201ENST00000258781 APBB1O00213 710 aa34.24■■■■□ 3.07
CCM2-201ENST00000258781 PTF1AQ7RTS3 328 aa34.24■■■■□ 3.07
CCM2-201ENST00000258781 ANP32EQ9BTT0 268 aa34.24■■■■□ 3.07
CCM2-201ENST00000258781 RIC3Q7Z5B4 369 aa34.24■■■■□ 3.07
CCM2-201ENST00000258781 VSIG10Q8N0Z9 540 aa34.24■■■■□ 3.07
CCM2-201ENST00000258781 LRRCC1Q9C099 1032 aa34.24■■■■□ 3.07
CCM2-201ENST00000258781 BTAF1O14981 1849 aa34.23■■■■□ 3.07
CCM2-201ENST00000258781 PPP1R42Q7Z4L9 355 aa34.23■■■■□ 3.07
CCM2-201ENST00000258781 ARFGEF2Q9Y6D5 1785 aa34.23■■■■□ 3.07
CCM2-201ENST00000258781 UTYO14607 1347 aa34.23■■■■□ 3.07
CCM2-201ENST00000258781 RBM6P78332 1123 aaKnown RBP34.22■■■■□ 3.07
CCM2-201ENST00000258781 COPS6Q7L5N1 327 aa34.22■■■■□ 3.07
CCM2-201ENST00000258781 C9orf78Q9NZ63 289 aaPredicted RBP34.22■■■■□ 3.07
CCM2-201ENST00000258781 GSPT1P15170 499 aaKnown RBP34.22■■■■□ 3.07
CCM2-201ENST00000258781 MTX1Q13505 466 aa34.22■■■■□ 3.07
CCM2-201ENST00000258781 DNAJC10Q8IXB1 793 aa34.22■■■■□ 3.07
CCM2-201ENST00000258781 OTUD7AQ8TE49 926 aaPredicted RBP34.21■■■■□ 3.07
CCM2-201ENST00000258781 NEXNQ0ZGT2 675 aa34.2■■■■□ 3.07
CCM2-201ENST00000258781 OSBPL3Q9H4L5 887 aa34.2■■■■□ 3.07
CCM2-201ENST00000258781 RGS17Q9UGC6 210 aaPredicted RBP34.2■■■■□ 3.07
CCM2-201ENST00000258781 NBPF26B4DH59 902 aa34.2■■■■□ 3.06
CCM2-201ENST00000258781 MFAP1P55081 439 aaKnown RBP34.2■■■■□ 3.06
CCM2-201ENST00000258781 CWF19L2Q2TBE0 894 aaKnown RBP34.2■■■■□ 3.06
CCM2-201ENST00000258781 NBPF14Q5TI25 921 aa34.2■■■■□ 3.06
CCM2-201ENST00000258781 NBPF10Q6P3W6 841 aaKnown RBP34.2■■■■□ 3.06
CCM2-201ENST00000258781 NBPF15Q8N660 670 aa34.2■■■■□ 3.06
CCM2-201ENST00000258781 RAB11FIP3O75154 756 aa34.19■■■■□ 3.06
CCM2-201ENST00000258781 METTL22Q9BUU2 404 aaPredicted RBP34.19■■■■□ 3.06
CCM2-201ENST00000258781 GRM8O00222 908 aa34.18■■■■□ 3.06
CCM2-201ENST00000258781 CDC45O75419 566 aa34.18■■■■□ 3.06
CCM2-201ENST00000258781 A1BGP04217 495 aa34.18■■■■□ 3.06
CCM2-201ENST00000258781 ANKRD13DQ6ZTN6 518 aa34.18■■■■□ 3.06
CCM2-201ENST00000258781 PALLDQ8WX93 1383 aa34.18■■■■□ 3.06
CCM2-201ENST00000258781 SRGAP3O43295 1099 aa34.18■■■■□ 3.06
CCM2-201ENST00000258781 AFDNP55196 1824 aaKnown RBP34.18■■■■□ 3.06
CCM2-201ENST00000258781 EIF5BO60841 1220 aaKnown RBP34.16■■■■□ 3.06
CCM2-201ENST00000258781 IGKV5-2P06315 115 aa34.16■■■■□ 3.06
CCM2-201ENST00000258781 C22orf23Q9BZE7 217 aa34.16■■■■□ 3.06
CCM2-201ENST00000258781 SALL3Q9BXA9 1300 aa34.16■■■■□ 3.06
CCM2-201ENST00000258781 TBC1D9Q6ZT07 1266 aa34.16■■■■□ 3.06
CCM2-201ENST00000258781 DAXXQ9UER7 740 aaPredicted RBP34.16■■■■□ 3.06
CCM2-201ENST00000258781 TUBGCP6Q96RT7 1819 aa34.15■■■■□ 3.06
CCM2-201ENST00000258781 CICQ96RK0 1608 aaPredicted RBP34.15■■■■□ 3.06
CCM2-201ENST00000258781 TEX13AQ9BXU3 409 aaPredicted RBP34.14■■■■□ 3.06
CCM2-201ENST00000258781 NEURL1BA8MQ27 555 aa34.14■■■■□ 3.06
CCM2-201ENST00000258781 KRT27Q7Z3Y8 459 aa34.14■■■■□ 3.06
CCM2-201ENST00000258781 NUP188Q5SRE5 1749 aa34.13■■■■□ 3.05
CCM2-201ENST00000258781 PDE1AP54750 535 aa34.13■■■■□ 3.05
CCM2-201ENST00000258781 HSP90AB4PQ58FF6 505 aa34.13■■■■□ 3.05
CCM2-201ENST00000258781 LOC102724428A0A0B4J2F2 783 aa34.12■■■■□ 3.05
CCM2-201ENST00000258781 SIK1P57059 783 aa34.12■■■■□ 3.05
CCM2-201ENST00000258781 SURF6O75683 361 aaKnown RBP34.12■■■■□ 3.05
CCM2-201ENST00000258781 PLBD2Q8NHP8 589 aa34.12■■■■□ 3.05
CCM2-201ENST00000258781 MYD88Q99836 296 aa34.12■■■■□ 3.05
CCM2-201ENST00000258781 BCL11AQ9H165 835 aa34.12■■■■□ 3.05
CCM2-201ENST00000258781 CYP19A1P11511 503 aaPredicted RBP34.11■■■■□ 3.05
CCM2-201ENST00000258781 STARD3NLO95772 234 aa34.1■■■■□ 3.05
CCM2-201ENST00000258781 GCKRQ14397 625 aa34.1■■■■□ 3.05
CCM2-201ENST00000258781 SMARCC1Q92922 1105 aaPredicted RBP34.1■■■■□ 3.05
CCM2-201ENST00000258781 RXRBP28702 533 aa34.1■■■■□ 3.05
CCM2-201ENST00000258781 ZNF831Q5JPB2 1677 aa34.1■■■■□ 3.05
CCM2-201ENST00000258781 POTEAQ6S8J7 498 aa34.09■■■■□ 3.05
CCM2-201ENST00000258781 COL5A3P25940 1745 aaPredicted RBP34.09■■■■□ 3.05
CCM2-201ENST00000258781 ATP6V1AP38606 617 aa34.08■■■■□ 3.05
CCM2-201ENST00000258781 KIF1BPQ96EK5 621 aa34.08■■■■□ 3.05
CCM2-201ENST00000258781 SUCLG2Q96I99 432 aa34.08■■■■□ 3.05
CCM2-201ENST00000258781 STAP2Q9UGK3 403 aa34.08■■■■□ 3.05
CCM2-201ENST00000258781 AOX1Q06278 1338 aa34.08■■■■□ 3.05
CCM2-201ENST00000258781 SDSP20132 328 aa34.07■■■■□ 3.05
CCM2-201ENST00000258781 MX1P20591 662 aa34.07■■■■□ 3.05
CCM2-201ENST00000258781 ITPK1Q13572 414 aa34.07■■■■□ 3.05
CCM2-201ENST00000258781 BECN1Q14457 450 aa34.07■■■■□ 3.05
CCM2-201ENST00000258781 RBM25P49756 843 aaKnown RBP34.07■■■■□ 3.04
CCM2-201ENST00000258781 MYH14Q7Z406 1995 aaKnown RBP34.07■■■■□ 3.04
CCM2-201ENST00000258781 RHPN1Q8TCX5 695 aa34.06■■■■□ 3.04
CCM2-201ENST00000258781 KAZALD1Q96I82 304 aa34.05■■■■□ 3.04
CCM2-201ENST00000258781 LY75O60449 1722 aa34.05■■■■□ 3.04
CCM2-201ENST00000258781 COL15A1P39059 1388 aa34.05■■■■□ 3.04
CCM2-201ENST00000258781 ZBTB1Q9Y2K1 713 aa34.04■■■■□ 3.04
CCM2-201ENST00000258781 FAM196AQ6ZSG2 479 aa34.03■■■■□ 3.04
CCM2-201ENST00000258781 TTLL7Q6ZT98 887 aa34.03■■■■□ 3.04
CCM2-201ENST00000258781 RREB1Q92766 1687 aa34.03■■■■□ 3.04
CCM2-201ENST00000258781 BICC1Q9H694 974 aaKnown RBP34.03■■■■□ 3.04
CCM2-201ENST00000258781 CASC1Q6TDU7 716 aa34.02■■■■□ 3.04
CCM2-201ENST00000258781 SLC4A3P48751 1232 aa34.01■■■■□ 3.03
CCM2-201ENST00000258781 KCNQ4P56696 695 aa34.01■■■■□ 3.03
CCM2-201ENST00000258781 BCL11BQ9C0K0 894 aaPredicted RBP34.01■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms