RNA–Protein interactions for RNA: ENST00000251654.8

PCCB-201, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCCB, Length 1,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-201ENST00000251654 MYD88Q99836 296 aa21.46■■□□□ 1.03
PCCB-201ENST00000251654 TEX13AQ9BXU3 409 aaPredicted RBP21.46■■□□□ 1.03
PCCB-201ENST00000251654 APBB1O00213 710 aa21.45■■□□□ 1.03
PCCB-201ENST00000251654 SMARCA5O60264 1052 aaPredicted RBP21.45■■□□□ 1.03
PCCB-201ENST00000251654 SEC24BO95487 1268 aa21.45■■□□□ 1.03
PCCB-201ENST00000251654 FAM98CQ17RN3 349 aaKnown RBP21.45■■□□□ 1.03
PCCB-201ENST00000251654 GCKRQ14397 625 aa21.45■■□□□ 1.02
PCCB-201ENST00000251654 TTLL7Q6ZT98 887 aa21.45■■□□□ 1.02
PCCB-201ENST00000251654 NPM2Q86SE8 214 aaKnown RBP21.45■■□□□ 1.02
PCCB-201ENST00000251654 C16orf71Q8IYS4 520 aaPredicted RBP21.45■■□□□ 1.02
PCCB-201ENST00000251654 KAZALD1Q96I82 304 aa21.45■■□□□ 1.02
PCCB-201ENST00000251654 THSD7AQ9UPZ6 1657 aa21.45■■□□□ 1.02
PCCB-201ENST00000251654 SRGAP3O43295 1099 aa21.44■■□□□ 1.02
PCCB-201ENST00000251654 OTUD7AQ8TE49 926 aaPredicted RBP21.44■■□□□ 1.02
PCCB-201ENST00000251654 RBM42Q9BTD8 480 aaKnown RBP21.44■■□□□ 1.02
PCCB-201ENST00000251654 ZBTB47Q9UFB7 747 aaPredicted RBP21.44■■□□□ 1.02
PCCB-201ENST00000251654 HDAC5Q9UQL6 1122 aa21.43■■□□□ 1.02
PCCB-201ENST00000251654 CICQ96RK0 1608 aaPredicted RBP21.43■■□□□ 1.02
PCCB-201ENST00000251654 USP21Q9UK80 565 aa21.43■■□□□ 1.02
PCCB-201ENST00000251654 STARD3NLO95772 234 aa21.42■■□□□ 1.02
PCCB-201ENST00000251654 SUCLG2Q96I99 432 aa21.42■■□□□ 1.02
PCCB-201ENST00000251654 LRRCC1Q9C099 1032 aa21.42■■□□□ 1.02
PCCB-201ENST00000251654 CYP19A1P11511 503 aaPredicted RBP21.4■■□□□ 1.02
PCCB-201ENST00000251654 GSPT1P15170 499 aaKnown RBP21.4■■□□□ 1.02
PCCB-201ENST00000251654 ACSBG1Q96GR2 724 aa21.4■■□□□ 1.02
PCCB-201ENST00000251654 SALL3Q9BXA9 1300 aa21.4■■□□□ 1.02
PCCB-201ENST00000251654 ATP5J2-PTCD1G3V325 749 aa21.39■■□□□ 1.02
PCCB-201ENST00000251654 BICC1Q9H694 974 aaKnown RBP21.39■■□□□ 1.02
PCCB-201ENST00000251654 COL15A1P39059 1388 aa21.39■■□□□ 1.01
PCCB-201ENST00000251654 TUBGCP6Q96RT7 1819 aa21.39■■□□□ 1.01
PCCB-201ENST00000251654 MSH5O43196 834 aa21.39■■□□□ 1.01
PCCB-201ENST00000251654 SURF6O75683 361 aaKnown RBP21.38■■□□□ 1.01
PCCB-201ENST00000251654 TTC22Q5TAA0 569 aa21.38■■□□□ 1.01
PCCB-201ENST00000251654 IPO9Q96P70 1041 aaKnown RBP21.38■■□□□ 1.01
PCCB-201ENST00000251654 BCL11AQ9H165 835 aa21.38■■□□□ 1.01
PCCB-201ENST00000251654 ZBTB3Q9H5J0 574 aa21.38■■□□□ 1.01
PCCB-201ENST00000251654 NOP58Q9Y2X3 529 aaKnown RBP21.38■■□□□ 1.01
PCCB-201ENST00000251654 RAB11FIP3O75154 756 aa21.37■■□□□ 1.01
PCCB-201ENST00000251654 OSBPL3Q9H4L5 887 aa21.37■■□□□ 1.01
PCCB-201ENST00000251654 CASP7P55210 303 aa21.36■■□□□ 1.01
PCCB-201ENST00000251654 RREB1Q92766 1687 aa21.36■■□□□ 1.01
PCCB-201ENST00000251654 PDE1AP54750 535 aa21.35■■□□□ 1.01
PCCB-201ENST00000251654 EPHA10Q5JZY3 1008 aa21.35■■□□□ 1.01
PCCB-201ENST00000251654 UBE3BQ7Z3V4 1068 aa21.35■■□□□ 1.01
PCCB-201ENST00000251654 ZNF831Q5JPB2 1677 aa21.35■■□□□ 1.01
PCCB-201ENST00000251654 A0A087WZG4 1122 aa21.34■■□□□ 1.01
PCCB-201ENST00000251654 KCNQ2O43526 872 aa21.34■■□□□ 1.01
PCCB-201ENST00000251654 MEX3CQ5U5Q3 659 aaKnown RBP21.34■■□□□ 1.01
PCCB-201ENST00000251654 ZBTB1Q9Y2K1 713 aa21.34■■□□□ 1.01
PCCB-201ENST00000251654 AFF2P51816 1311 aa21.34■■□□□ 1.01
PCCB-201ENST00000251654 A0A0G2JS52 829 aa21.34■■□□□ 1.01
PCCB-201ENST00000251654 RHPN1Q8TCX5 695 aa21.34■■□□□ 1.01
PCCB-201ENST00000251654 ANKRD36CQ5JPF3 1778 aa21.33■■□□□ 1.01
PCCB-201ENST00000251654 PALLDQ8WX93 1383 aa21.33■■□□□ 1.01
PCCB-201ENST00000251654 HSP90AB4PQ58FF6 505 aa21.33■■□□□ 1.01
PCCB-201ENST00000251654 CCDC191Q8NCU4 936 aa21.33■■□□□ 1.01
PCCB-201ENST00000251654 KIF1BPQ96EK5 621 aa21.33■■□□□ 1.01
PCCB-201ENST00000251654 CWC25Q9NXE8 425 aaPredicted RBP21.33■■□□□ 1.01
PCCB-201ENST00000251654 ZNF330Q9Y3S2 320 aaPredicted RBP21.33■■□□□ 1.01
PCCB-201ENST00000251654 COL5A3P25940 1745 aaPredicted RBP21.33■■□□□ 1
PCCB-201ENST00000251654 LOC102724428A0A0B4J2F2 783 aa21.32■■□□□ 1
PCCB-201ENST00000251654 H7C1W4 665 aa21.32■■□□□ 1
PCCB-201ENST00000251654 SIK1P57059 783 aa21.32■■□□□ 1
PCCB-201ENST00000251654 RABL6Q3YEC7 729 aaPredicted RBP21.32■■□□□ 1
PCCB-201ENST00000251654 JARID2Q92833 1246 aaPredicted RBP21.32■■□□□ 1
PCCB-201ENST00000251654 IL1RAPL2Q9NP60 686 aa21.32■■□□□ 1
PCCB-201ENST00000251654 ATRNO75882 1429 aa21.32■■□□□ 1
PCCB-201ENST00000251654 MYH14Q7Z406 1995 aaKnown RBP21.32■■□□□ 1
PCCB-201ENST00000251654 MX1P20591 662 aa21.32■■□□□ 1
PCCB-201ENST00000251654 KIF6Q6ZMV9 814 aa21.32■■□□□ 1
PCCB-201ENST00000251654 GJD4Q96KN9 370 aaPredicted RBP21.32■■□□□ 1
PCCB-201ENST00000251654 ISCA1Q9BUE6 129 aa21.32■■□□□ 1
PCCB-201ENST00000251654 PA2G4Q9UQ80 394 aaKnown RBP21.32■■□□□ 1
PCCB-201ENST00000251654 MAP3K15Q6ZN16 1313 aa21.31■■□□□ 1
PCCB-201ENST00000251654 NHSQ6T4R5 1651 aa21.31■■□□□ 1
PCCB-201ENST00000251654 TCIRG1Q13488 830 aa21.31■■□□□ 1
PCCB-201ENST00000251654 TBC1D9Q6ZT07 1266 aa21.31■■□□□ 1
PCCB-201ENST00000251654 TBC1D32Q96NH3 1257 aa21.31■■□□□ 1
PCCB-201ENST00000251654 UPF2Q9HAU5 1272 aaKnown RBP21.31■■□□□ 1
PCCB-201ENST00000251654 STAP2Q9UGK3 403 aa21.31■■□□□ 1
PCCB-201ENST00000251654 IL6STP40189 918 aaPredicted RBP21.3■■□□□ 1
PCCB-201ENST00000251654 MYT1Q01538 1121 aa21.3■■□□□ 1
PCCB-201ENST00000251654 NUP98P52948 1817 aa21.3■■□□□ 1
PCCB-201ENST00000251654 TRIM28Q13263 835 aaKnown RBP21.29■■□□□ 1
PCCB-201ENST00000251654 EP400Q96L91 3159 aa21.29■■□□□ 1
PCCB-201ENST00000251654 BTAF1O14981 1849 aa21.29■■□□□ 1
PCCB-201ENST00000251654 CDC45O75419 566 aa21.29■■□□□ 1
PCCB-201ENST00000251654 SDSP20132 328 aa21.29■■□□□ 1
PCCB-201ENST00000251654 ATP6V1AP38606 617 aa21.29■■□□□ 1
PCCB-201ENST00000251654 ITPK1Q13572 414 aa21.29■■□□□ 1
PCCB-201ENST00000251654 TSHZ3Q63HK5 1081 aa21.29■■□□□ 1
PCCB-201ENST00000251654 SMARCC1Q92922 1105 aaPredicted RBP21.29■■□□□ 1
PCCB-201ENST00000251654 MFAP1P55081 439 aaKnown RBP21.28■■□□□ 1
PCCB-201ENST00000251654 INTS5Q6P9B9 1019 aaKnown RBP21.28■■□□□ 1
PCCB-201ENST00000251654 GIGYF2Q6Y7W6 1299 aaKnown RBP21.27■■□□□ 1
PCCB-201ENST00000251654 AOX1Q06278 1338 aa21.27■■□□□ 1
PCCB-201ENST00000251654 ONECUT3O60422 494 aaPredicted RBP21.27■□□□□ 0.99
PCCB-201ENST00000251654 RFX5P48382 616 aaPredicted RBP21.27■□□□□ 0.99
PCCB-201ENST00000251654 FOXO4P98177 505 aa21.27■□□□□ 0.99
PCCB-201ENST00000251654 OS9Q13438 667 aaPredicted RBP21.27■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms