RNA–Protein interactions for RNA: ENST00000216492.9

CHGA-201, Transcript of chromogranin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHGA, Length 2,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-201ENST00000216492 ANTXR1Q9H6X2 564 aa20.97■□□□□ 0.95
CHGA-201ENST00000216492 LRRFIP2Q9Y608 721 aaKnown RBP20.97■□□□□ 0.95
CHGA-201ENST00000216492 STARD3NLO95772 234 aa20.97■□□□□ 0.95
CHGA-201ENST00000216492 NEXNQ0ZGT2 675 aa20.97■□□□□ 0.95
CHGA-201ENST00000216492 CWF19L2Q2TBE0 894 aaKnown RBP20.97■□□□□ 0.95
CHGA-201ENST00000216492 DNAJC10Q8IXB1 793 aa20.97■□□□□ 0.95
CHGA-201ENST00000216492 GJD4Q96KN9 370 aaPredicted RBP20.97■□□□□ 0.95
CHGA-201ENST00000216492 METTL22Q9BUU2 404 aaPredicted RBP20.96■□□□□ 0.95
CHGA-201ENST00000216492 C9orf78Q9NZ63 289 aaPredicted RBP20.96■□□□□ 0.95
CHGA-201ENST00000216492 WNK3Q9BYP7 1800 aa20.96■□□□□ 0.95
CHGA-201ENST00000216492 ATP8B2P98198 1209 aa20.95■□□□□ 0.94
CHGA-201ENST00000216492 PAPPAQ13219 1627 aa20.95■□□□□ 0.94
CHGA-201ENST00000216492 UBR2Q8IWV8 1755 aa20.95■□□□□ 0.94
CHGA-201ENST00000216492 KAT6BQ8WYB5 2073 aa20.95■□□□□ 0.94
CHGA-201ENST00000216492 GLI3P10071 1580 aa20.95■□□□□ 0.94
CHGA-201ENST00000216492 PLBD2Q8NHP8 589 aa20.94■□□□□ 0.94
CHGA-201ENST00000216492 SLC4A9Q96Q91 983 aa20.94■□□□□ 0.94
CHGA-201ENST00000216492 IGKV5-2P06315 115 aa20.93■□□□□ 0.94
CHGA-201ENST00000216492 RBM25P49756 843 aaKnown RBP20.93■□□□□ 0.94
CHGA-201ENST00000216492 HSCBQ8IWL3 235 aa20.93■□□□□ 0.94
CHGA-201ENST00000216492 MYD88Q99836 296 aa20.93■□□□□ 0.94
CHGA-201ENST00000216492 TRPC5Q9UL62 973 aaPredicted RBP20.93■□□□□ 0.94
CHGA-201ENST00000216492 HDAC5Q9UQL6 1122 aa20.92■□□□□ 0.94
CHGA-201ENST00000216492 PNMA6EA0A0J9YXQ4 647 aa20.92■□□□□ 0.94
CHGA-201ENST00000216492 KCNQ2O43526 872 aa20.92■□□□□ 0.94
CHGA-201ENST00000216492 EIF5BO60841 1220 aaKnown RBP20.92■□□□□ 0.94
CHGA-201ENST00000216492 ITGB4P16144 1822 aa20.91■□□□□ 0.94
CHGA-201ENST00000216492 NEURL1BA8MQ27 555 aa20.91■□□□□ 0.94
CHGA-201ENST00000216492 TTLL7Q6ZT98 887 aa20.91■□□□□ 0.94
CHGA-201ENST00000216492 GRM8O00222 908 aa20.9■□□□□ 0.94
CHGA-201ENST00000216492 CYP19A1P11511 503 aaPredicted RBP20.9■□□□□ 0.94
CHGA-201ENST00000216492 GCKRQ14397 625 aa20.89■□□□□ 0.93
CHGA-201ENST00000216492 QTRT2Q9H974 415 aaKnown RBP20.89■□□□□ 0.93
CHGA-201ENST00000216492 ZNF330Q9Y3S2 320 aaPredicted RBP20.89■□□□□ 0.93
CHGA-201ENST00000216492 ONECUT3O60422 494 aaPredicted RBP20.89■□□□□ 0.93
CHGA-201ENST00000216492 PPP1R42Q7Z4L9 355 aa20.88■□□□□ 0.93
CHGA-201ENST00000216492 UTYO14607 1347 aa20.88■□□□□ 0.93
CHGA-201ENST00000216492 LAMB4A4D0S4 1761 aa20.88■□□□□ 0.93
CHGA-201ENST00000216492 LOC102724428A0A0B4J2F2 783 aa20.87■□□□□ 0.93
CHGA-201ENST00000216492 ATP5J2-PTCD1G3V325 749 aa20.87■□□□□ 0.93
CHGA-201ENST00000216492 APBB1O00213 710 aa20.87■□□□□ 0.93
CHGA-201ENST00000216492 ATP6V1AP38606 617 aa20.87■□□□□ 0.93
CHGA-201ENST00000216492 SIK1P57059 783 aa20.87■□□□□ 0.93
CHGA-201ENST00000216492 SSH3Q8TE77 659 aa20.87■□□□□ 0.93
CHGA-201ENST00000216492 SMARCC1Q92922 1105 aaPredicted RBP20.87■□□□□ 0.93
CHGA-201ENST00000216492 ZBTB3Q9H5J0 574 aa20.87■□□□□ 0.93
CHGA-201ENST00000216492 CHMP5Q9NZZ3 219 aa20.87■□□□□ 0.93
CHGA-201ENST00000216492 SRGAP3O43295 1099 aa20.86■□□□□ 0.93
CHGA-201ENST00000216492 SNX21Q969T3 373 aa20.86■□□□□ 0.93
CHGA-201ENST00000216492 IBTKQ9P2D0 1353 aaPredicted RBP20.86■□□□□ 0.93
CHGA-201ENST00000216492 DOT1LQ8TEK3 1739 aa20.86■□□□□ 0.93
CHGA-201ENST00000216492 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.86■□□□□ 0.93
CHGA-201ENST00000216492 N4BP2Q86UW6 1770 aaPredicted RBP20.85■□□□□ 0.93
CHGA-201ENST00000216492 EXOC6BQ9Y2D4 811 aa20.85■□□□□ 0.93
CHGA-201ENST00000216492 ARXQ96QS3 562 aa20.85■□□□□ 0.93
CHGA-201ENST00000216492 ATRNO75882 1429 aa20.85■□□□□ 0.93
CHGA-201ENST00000216492 POLA2Q14181 598 aa20.84■□□□□ 0.93
CHGA-201ENST00000216492 FAM182BQ5T319 152 aa20.84■□□□□ 0.93
CHGA-201ENST00000216492 SEPT12Q8IYM1 358 aa20.84■□□□□ 0.93
CHGA-201ENST00000216492 PALLDQ8WX93 1383 aa20.84■□□□□ 0.93
CHGA-201ENST00000216492 CDC45O75419 566 aa20.84■□□□□ 0.93
CHGA-201ENST00000216492 SUCLG2Q96I99 432 aa20.84■□□□□ 0.93
CHGA-201ENST00000216492 ZBTB1Q9Y2K1 713 aa20.84■□□□□ 0.93
CHGA-201ENST00000216492 MTX1Q13505 466 aa20.83■□□□□ 0.93
CHGA-201ENST00000216492 KIF6Q6ZMV9 814 aa20.83■□□□□ 0.93
CHGA-201ENST00000216492 TBC1D9Q6ZT07 1266 aa20.83■□□□□ 0.93
CHGA-201ENST00000216492 SPRYD3Q8NCJ5 442 aa20.83■□□□□ 0.93
CHGA-201ENST00000216492 A0A087WZG4 1122 aa20.82■□□□□ 0.92
CHGA-201ENST00000216492 SMARCA5O60264 1052 aaPredicted RBP20.82■□□□□ 0.92
CHGA-201ENST00000216492 C16orf71Q8IYS4 520 aaPredicted RBP20.82■□□□□ 0.92
CHGA-201ENST00000216492 KAZALD1Q96I82 304 aa20.82■□□□□ 0.92
CHGA-201ENST00000216492 SURF6O75683 361 aaKnown RBP20.81■□□□□ 0.92
CHGA-201ENST00000216492 BICC1Q9H694 974 aaKnown RBP20.81■□□□□ 0.92
CHGA-201ENST00000216492 IL6STP40189 918 aaPredicted RBP20.81■□□□□ 0.92
CHGA-201ENST00000216492 PTF1AQ7RTS3 328 aa20.81■□□□□ 0.92
CHGA-201ENST00000216492 JARID2Q92833 1246 aaPredicted RBP20.81■□□□□ 0.92
CHGA-201ENST00000216492 LRRCC1Q9C099 1032 aa20.81■□□□□ 0.92
CHGA-201ENST00000216492 TCIRG1Q13488 830 aa20.8■□□□□ 0.92
CHGA-201ENST00000216492 ITPK1Q13572 414 aa20.8■□□□□ 0.92
CHGA-201ENST00000216492 UBE3BQ7Z3V4 1068 aa20.8■□□□□ 0.92
CHGA-201ENST00000216492 CCDC191Q8NCU4 936 aa20.8■□□□□ 0.92
CHGA-201ENST00000216492 CWC25Q9NXE8 425 aaPredicted RBP20.8■□□□□ 0.92
CHGA-201ENST00000216492 INTS5Q6P9B9 1019 aaKnown RBP20.79■□□□□ 0.92
CHGA-201ENST00000216492 PLEKHM2Q8IWE5 1019 aa20.79■□□□□ 0.92
CHGA-201ENST00000216492 MAP3K15Q6ZN16 1313 aa20.79■□□□□ 0.92
CHGA-201ENST00000216492 CRKLP46109 303 aaKnown RBP20.79■□□□□ 0.92
CHGA-201ENST00000216492 CCDC87Q9NVE4 849 aa20.79■□□□□ 0.92
CHGA-201ENST00000216492 H7C1W4 665 aa20.78■□□□□ 0.92
CHGA-201ENST00000216492 RAB11FIP3O75154 756 aa20.78■□□□□ 0.92
CHGA-201ENST00000216492 THSD7AQ9UPZ6 1657 aa20.78■□□□□ 0.92
CHGA-201ENST00000216492 TTC22Q5TAA0 569 aa20.77■□□□□ 0.92
CHGA-201ENST00000216492 GIGYF2Q6Y7W6 1299 aaKnown RBP20.77■□□□□ 0.92
CHGA-201ENST00000216492 MCM4P33991 863 aa20.77■□□□□ 0.92
CHGA-201ENST00000216492 ISCA1Q9BUE6 129 aa20.77■□□□□ 0.92
CHGA-201ENST00000216492 EIF5P55010 431 aaKnown RBP20.76■□□□□ 0.91
CHGA-201ENST00000216492 CASP7P55210 303 aa20.76■□□□□ 0.91
CHGA-201ENST00000216492 TRIM28Q13263 835 aaKnown RBP20.76■□□□□ 0.91
CHGA-201ENST00000216492 HSP90AB4PQ58FF6 505 aa20.76■□□□□ 0.91
CHGA-201ENST00000216492 EPHA10Q5JZY3 1008 aa20.76■□□□□ 0.91
CHGA-201ENST00000216492 TBC1D2BQ9UPU7 963 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms