RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 OR52N2Q8NGI0 321 aa17.53■□□□□ 0.4
CLN6-213ENST00000636212 ZNF483Q8TF39 744 aaPredicted RBP17.53■□□□□ 0.4
CLN6-213ENST00000636212 RHOXF2Q9BQY4 288 aa17.53■□□□□ 0.4
CLN6-213ENST00000636212 MRPL1Q9BYD6 325 aaKnown RBP17.53■□□□□ 0.4
CLN6-213ENST00000636212 TP63Q9H3D4 680 aaPredicted RBP17.53■□□□□ 0.4
CLN6-213ENST00000636212 BRF2Q9HAW0 419 aa17.53■□□□□ 0.4
CLN6-213ENST00000636212 IL1RL2Q9HB29 575 aa17.53■□□□□ 0.4
CLN6-213ENST00000636212 TRPS1Q9UHF7 1281 aa17.53■□□□□ 0.4
CLN6-213ENST00000636212 STK38LQ9Y2H1 464 aa17.53■□□□□ 0.4
CLN6-213ENST00000636212 MYO7BQ6PIF6 2116 aa17.53■□□□□ 0.4
CLN6-213ENST00000636212 CAPN14A8MX76 684 aa17.52■□□□□ 0.4
CLN6-213ENST00000636212 ZNHIT1O43257 154 aa17.52■□□□□ 0.4
CLN6-213ENST00000636212 SUPT7LO94864 414 aa17.52■□□□□ 0.4
CLN6-213ENST00000636212 CDH13P55290 713 aa17.52■□□□□ 0.4
CLN6-213ENST00000636212 C3P1Q6ZMU1 363 aa17.52■□□□□ 0.4
CLN6-213ENST00000636212 DGAT2L6Q6ZPD8 337 aa17.52■□□□□ 0.4
CLN6-213ENST00000636212 CHERPQ8IWX8 916 aaKnown RBP17.52■□□□□ 0.4
CLN6-213ENST00000636212 GALNT12Q8IXK2 581 aa17.52■□□□□ 0.4
CLN6-213ENST00000636212 METTL4Q8N3J2 472 aa17.52■□□□□ 0.4
CLN6-213ENST00000636212 FAM109AQ8N4B1 249 aa17.52■□□□□ 0.4
CLN6-213ENST00000636212 TRPC4APQ8TEL6 797 aa17.52■□□□□ 0.4
CLN6-213ENST00000636212 SPACA9Q96E40 222 aaPredicted RBP17.52■□□□□ 0.4
CLN6-213ENST00000636212 C1QTNF3Q9BXJ4 246 aa17.52■□□□□ 0.4
CLN6-213ENST00000636212 PSME2Q9UL46 239 aa17.52■□□□□ 0.4
CLN6-213ENST00000636212 C2orf92A0A1B0GVN3 265 aa17.51■□□□□ 0.39
CLN6-213ENST00000636212 GOLGA6L10A6NI86 522 aa17.51■□□□□ 0.39
CLN6-213ENST00000636212 HRKO00198 91 aa17.51■□□□□ 0.39
CLN6-213ENST00000636212 PDYNP01213 254 aa17.51■□□□□ 0.39
CLN6-213ENST00000636212 KRT6AP02538 564 aa17.51■□□□□ 0.39
CLN6-213ENST00000636212 KRT6BP04259 564 aa17.51■□□□□ 0.39
CLN6-213ENST00000636212 GRNP28799 593 aaKnown RBP17.51■□□□□ 0.39
CLN6-213ENST00000636212 PTGER4P35408 488 aa17.51■□□□□ 0.39
CLN6-213ENST00000636212 KRT6CP48668 564 aa17.51■□□□□ 0.39
CLN6-213ENST00000636212 KCNJ2P63252 427 aa17.51■□□□□ 0.39
CLN6-213ENST00000636212 CLCQ05315 142 aa17.51■□□□□ 0.39
CLN6-213ENST00000636212 RASA2Q15283 850 aa17.51■□□□□ 0.39
CLN6-213ENST00000636212 FGD2Q7Z6J4 655 aa17.51■□□□□ 0.39
CLN6-213ENST00000636212 TICAM1Q8IUC6 712 aa17.51■□□□□ 0.39
CLN6-213ENST00000636212 SLC22A9Q8IVM8 553 aa17.51■□□□□ 0.39
CLN6-213ENST00000636212 FAM13CQ8NE31 585 aa17.51■□□□□ 0.39
CLN6-213ENST00000636212 ACMSDQ8TDX5 336 aa17.51■□□□□ 0.39
CLN6-213ENST00000636212 DOK4Q8TEW6 326 aa17.51■□□□□ 0.39
CLN6-213ENST00000636212 CA5BP1Q8WTZ4 195 aa17.51■□□□□ 0.39
CLN6-213ENST00000636212 WWTR1Q9GZV5 400 aa17.51■□□□□ 0.39
CLN6-213ENST00000636212 LDAHQ9H6V9 325 aa17.51■□□□□ 0.39
CLN6-213ENST00000636212 EXO5Q9H790 373 aa17.51■□□□□ 0.39
CLN6-213ENST00000636212 ZDHHC11Q9H8X9 412 aa17.51■□□□□ 0.39
CLN6-213ENST00000636212 PLSCR2Q9NRY7 297 aa17.51■□□□□ 0.39
CLN6-213ENST00000636212 TEX10Q9NXF1 929 aaPredicted RBP17.51■□□□□ 0.39
CLN6-213ENST00000636212 CNIH4Q9P003 139 aa17.51■□□□□ 0.39
CLN6-213ENST00000636212 UNC79Q9P2D8 2635 aa17.51■□□□□ 0.39
CLN6-213ENST00000636212 PSMC3IPQ9P2W1 217 aaPredicted RBP17.51■□□□□ 0.39
CLN6-213ENST00000636212 BOKQ9UMX3 212 aaPredicted RBP17.51■□□□□ 0.39
CLN6-213ENST00000636212 C1orf226A1L170 272 aa17.5■□□□□ 0.39
CLN6-213ENST00000636212 CCDC151A5D8V7 595 aa17.5■□□□□ 0.39
CLN6-213ENST00000636212 PINLYPA6NC86 204 aa17.5■□□□□ 0.39
CLN6-213ENST00000636212 WASHC1A8K0Z3 465 aa17.5■□□□□ 0.39
CLN6-213ENST00000636212 TP53I11O14683 189 aa17.5■□□□□ 0.39
CLN6-213ENST00000636212 PGRMC2O15173 223 aa17.5■□□□□ 0.39
CLN6-213ENST00000636212 GSTA1P08263 222 aa17.5■□□□□ 0.39
CLN6-213ENST00000636212 CCL3P10147 92 aa17.5■□□□□ 0.39
CLN6-213ENST00000636212 PORP16435 677 aaPredicted RBP17.5■□□□□ 0.39
CLN6-213ENST00000636212 TSPAN8P19075 237 aa17.5■□□□□ 0.39
CLN6-213ENST00000636212 NT5EP21589 574 aa17.5■□□□□ 0.39
CLN6-213ENST00000636212 ATP5F1P24539 256 aaPredicted RBP17.5■□□□□ 0.39
CLN6-213ENST00000636212 HMOX2P30519 316 aa17.5■□□□□ 0.39
CLN6-213ENST00000636212 HSD17B3P37058 310 aa17.5■□□□□ 0.39
CLN6-213ENST00000636212 DNASE1L1P49184 302 aa17.5■□□□□ 0.39
CLN6-213ENST00000636212 TMED10P49755 219 aaKnown RBP17.5■□□□□ 0.39
CLN6-213ENST00000636212 XKP51811 444 aa17.5■□□□□ 0.39
CLN6-213ENST00000636212 NRG3P56975 720 aa17.5■□□□□ 0.39
CLN6-213ENST00000636212 SLC37A1P57057 533 aa17.5■□□□□ 0.39
CLN6-213ENST00000636212 SLC29A2Q14542 456 aa17.5■□□□□ 0.39
CLN6-213ENST00000636212 SLC10A1Q14973 349 aa17.5■□□□□ 0.39
CLN6-213ENST00000636212 EBPQ15125 230 aaKnown RBP17.5■□□□□ 0.39
CLN6-213ENST00000636212 ZNF791Q3KP31 576 aaPredicted RBP17.5■□□□□ 0.39
CLN6-213ENST00000636212 LETMD1Q6P1Q0 360 aa17.5■□□□□ 0.39
CLN6-213ENST00000636212 RPS27LQ71UM5 84 aaKnown RBP17.5■□□□□ 0.39
CLN6-213ENST00000636212 COMMD6Q7Z4G1 85 aa17.5■□□□□ 0.39
CLN6-213ENST00000636212 MCEMP1Q8IX19 187 aa17.5■□□□□ 0.39
CLN6-213ENST00000636212 SDCCAG3Q96C92 435 aa17.5■□□□□ 0.39
CLN6-213ENST00000636212 DMRTA2Q96SC8 542 aa17.5■□□□□ 0.39
CLN6-213ENST00000636212 FAIM2Q9BWQ8 316 aa17.5■□□□□ 0.39
CLN6-213ENST00000636212 CXorf21Q9HAI6 301 aa17.5■□□□□ 0.39
CLN6-213ENST00000636212 TMEM216Q9P0N5 145 aa17.5■□□□□ 0.39
CLN6-213ENST00000636212 FETUBQ9UGM5 382 aa17.5■□□□□ 0.39
CLN6-213ENST00000636212 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.5■□□□□ 0.39
CLN6-213ENST00000636212 A0A0G2JMM0 328 aa17.49■□□□□ 0.39
CLN6-213ENST00000636212 A0A1W2PPB8 328 aa17.49■□□□□ 0.39
CLN6-213ENST00000636212 A0A1W2PRS3 328 aa17.49■□□□□ 0.39
CLN6-213ENST00000636212 OR14I1A6ND48 311 aa17.49■□□□□ 0.39
CLN6-213ENST00000636212 KIR3DP1A8MWS1 328 aa17.49■□□□□ 0.39
CLN6-213ENST00000636212 NPIPA2E9PIF3 369 aa17.49■□□□□ 0.39
CLN6-213ENST00000636212 NPIPA3F8WFD2 350 aa17.49■□□□□ 0.39
CLN6-213ENST00000636212 BCKDKO14874 412 aa17.49■□□□□ 0.39
CLN6-213ENST00000636212 ZNF354AO60765 605 aaPredicted RBP17.49■□□□□ 0.39
CLN6-213ENST00000636212 GLSO94925 669 aaPredicted RBP17.49■□□□□ 0.39
CLN6-213ENST00000636212 OR4F21O95013 312 aa17.49■□□□□ 0.39
CLN6-213ENST00000636212 HSD3B1P14060 373 aa17.49■□□□□ 0.39
CLN6-213ENST00000636212 HSD3B2P26439 372 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms