RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 GALNT18Q6P9A2 607 aa20.72■□□□□ 0.91
SF1-220ENST00000626028 FRMD7Q6ZUT3 714 aa20.72■□□□□ 0.91
SF1-220ENST00000626028 CCNYL1Q8N7R7 359 aa20.72■□□□□ 0.91
SF1-220ENST00000626028 GPR137Q96N19 417 aa20.72■□□□□ 0.91
SF1-220ENST00000626028 SHCBP1LQ9BZQ2 653 aa20.72■□□□□ 0.91
SF1-220ENST00000626028 SIRT5Q9NXA8 310 aa20.72■□□□□ 0.91
SF1-220ENST00000626028 MCM8Q9UJA3 840 aa20.72■□□□□ 0.91
SF1-220ENST00000626028 PCDHA9Q9Y5H5 950 aa20.72■□□□□ 0.91
SF1-220ENST00000626028 WWP2O00308 870 aa20.71■□□□□ 0.91
SF1-220ENST00000626028 IFFO1Q0D2I5 559 aa20.71■□□□□ 0.91
SF1-220ENST00000626028 ASPHQ12797 758 aa20.71■□□□□ 0.91
SF1-220ENST00000626028 LIPMQ5VYY2 423 aa20.71■□□□□ 0.91
SF1-220ENST00000626028 MTFR2Q6P444 385 aa20.71■□□□□ 0.91
SF1-220ENST00000626028 RNF111Q6ZNA4 994 aa20.71■□□□□ 0.91
SF1-220ENST00000626028 RTL4Q6ZR62 310 aa20.71■□□□□ 0.91
SF1-220ENST00000626028 SLC29A4Q7RTT9 530 aa20.71■□□□□ 0.91
SF1-220ENST00000626028 SIAH3Q8IW03 269 aa20.71■□□□□ 0.91
SF1-220ENST00000626028 MREGQ8N565 214 aa20.71■□□□□ 0.91
SF1-220ENST00000626028 C1orf52Q8N6N3 182 aaKnown RBP20.71■□□□□ 0.91
SF1-220ENST00000626028 ZNF321PQ8N8H1 164 aa20.71■□□□□ 0.91
SF1-220ENST00000626028 ZFP62Q8NB50 900 aaPredicted RBP20.71■□□□□ 0.91
SF1-220ENST00000626028 PSD4Q8NDX1 1056 aa20.71■□□□□ 0.91
SF1-220ENST00000626028 C16orf52Q8NHV5 167 aa20.71■□□□□ 0.91
SF1-220ENST00000626028 SLC22A8Q8TCC7 542 aa20.71■□□□□ 0.91
SF1-220ENST00000626028 PPWD1Q96BP3 646 aaKnown RBP20.71■□□□□ 0.91
SF1-220ENST00000626028 TRMOQ9BU70 441 aa20.71■□□□□ 0.91
SF1-220ENST00000626028 ACPTQ9BZG2 426 aa20.71■□□□□ 0.91
SF1-220ENST00000626028 CXorf21Q9HAI6 301 aa20.71■□□□□ 0.91
SF1-220ENST00000626028 MID1IP1Q9NPA3 183 aa20.71■□□□□ 0.91
SF1-220ENST00000626028 DNAJC13O75165 2243 aa20.71■□□□□ 0.91
SF1-220ENST00000626028 ESPNB1AK53 854 aa20.7■□□□□ 0.9
SF1-220ENST00000626028 OR6B1O95007 311 aa20.7■□□□□ 0.9
SF1-220ENST00000626028 PORP16435 677 aaPredicted RBP20.7■□□□□ 0.9
SF1-220ENST00000626028 SOX3P41225 446 aa20.7■□□□□ 0.9
SF1-220ENST00000626028 ST13P50502 369 aaKnown RBP20.7■□□□□ 0.9
SF1-220ENST00000626028 SLC37A1P57057 533 aa20.7■□□□□ 0.9
SF1-220ENST00000626028 ERVK-8P63133 956 aa20.7■□□□□ 0.9
SF1-220ENST00000626028 C6orf163Q5TEZ5 329 aa20.7■□□□□ 0.9
SF1-220ENST00000626028 TRABD2AQ86V40 505 aa20.7■□□□□ 0.9
SF1-220ENST00000626028 SULF2Q8IWU5 870 aa20.7■□□□□ 0.9
SF1-220ENST00000626028 C9orf40Q8IXQ3 194 aa20.7■□□□□ 0.9
SF1-220ENST00000626028 SAMD14Q8IZD0 417 aaPredicted RBP20.7■□□□□ 0.9
SF1-220ENST00000626028 CCDC63Q8NA47 563 aa20.7■□□□□ 0.9
SF1-220ENST00000626028 TM4SF18Q96CE8 201 aa20.7■□□□□ 0.9
SF1-220ENST00000626028 C11orf24Q96F05 449 aaPredicted RBP20.7■□□□□ 0.9
SF1-220ENST00000626028 APOPT1Q96IL0 206 aa20.7■□□□□ 0.9
SF1-220ENST00000626028 METTL2AQ96IZ6 378 aaKnown RBP20.7■□□□□ 0.9
SF1-220ENST00000626028 CNPPD1Q9BV87 410 aa20.7■□□□□ 0.9
SF1-220ENST00000626028 TMEM109Q9BVC6 243 aa20.7■□□□□ 0.9
SF1-220ENST00000626028 IQCGQ9H095 443 aaKnown RBP20.7■□□□□ 0.9
SF1-220ENST00000626028 CES1P1Q9UKY3 287 aa20.7■□□□□ 0.9
SF1-220ENST00000626028 ERVK-19Q9WJR5 959 aa20.7■□□□□ 0.9
SF1-220ENST00000626028 PLLPQ9Y342 182 aa20.7■□□□□ 0.9
SF1-220ENST00000626028 PCNX1Q96RV3 2341 aa20.69■□□□□ 0.9
SF1-220ENST00000626028 TLDC2A0PJX2 215 aa20.69■□□□□ 0.9
SF1-220ENST00000626028 FOXO6A8MYZ6 492 aa20.69■□□□□ 0.9
SF1-220ENST00000626028 LRRTM2O43300 516 aa20.69■□□□□ 0.9
SF1-220ENST00000626028 ASNA1O43681 348 aa20.69■□□□□ 0.9
SF1-220ENST00000626028 PEX1O43933 1283 aa20.69■□□□□ 0.9
SF1-220ENST00000626028 ATP1B1P05026 303 aa20.69■□□□□ 0.9
SF1-220ENST00000626028 CPMP14384 443 aa20.69■□□□□ 0.9
SF1-220ENST00000626028 DRD2P14416 443 aa20.69■□□□□ 0.9
SF1-220ENST00000626028 CSNK2A2P19784 350 aaPredicted RBP20.69■□□□□ 0.9
SF1-220ENST00000626028 XKP51811 444 aa20.69■□□□□ 0.9
SF1-220ENST00000626028 CASP6P55212 293 aa20.69■□□□□ 0.9
SF1-220ENST00000626028 KCNK10P57789 538 aa20.69■□□□□ 0.9
SF1-220ENST00000626028 ACSM2AQ08AH3 577 aa20.69■□□□□ 0.9
SF1-220ENST00000626028 FUT7Q11130 342 aa20.69■□□□□ 0.9
SF1-220ENST00000626028 ZNF267Q14586 743 aaPredicted RBP20.69■□□□□ 0.9
SF1-220ENST00000626028 ACSM2BQ68CK6 577 aa20.69■□□□□ 0.9
SF1-220ENST00000626028 IL20RBQ6UXL0 311 aa20.69■□□□□ 0.9
SF1-220ENST00000626028 DGAT2L6Q6ZPD8 337 aa20.69■□□□□ 0.9
SF1-220ENST00000626028 RGS9BPQ6ZS82 235 aa20.69■□□□□ 0.9
SF1-220ENST00000626028 TRIM46Q7Z4K8 759 aa20.69■□□□□ 0.9
SF1-220ENST00000626028 MDGA2Q7Z553 956 aa20.69■□□□□ 0.9
SF1-220ENST00000626028 GALNT12Q8IXK2 581 aa20.69■□□□□ 0.9
SF1-220ENST00000626028 GHDCQ8N2G8 530 aa20.69■□□□□ 0.9
SF1-220ENST00000626028 CPSF7Q8N684 471 aaKnown RBP20.69■□□□□ 0.9
SF1-220ENST00000626028 C17orf47Q8NEP4 570 aa20.69■□□□□ 0.9
SF1-220ENST00000626028 OR7G1Q8NGA0 311 aa20.69■□□□□ 0.9
SF1-220ENST00000626028 TP53INP1Q96A56 240 aa20.69■□□□□ 0.9
SF1-220ENST00000626028 HBEGFQ99075 208 aa20.69■□□□□ 0.9
SF1-220ENST00000626028 LIN28AQ9H9Z2 209 aaKnown RBP20.69■□□□□ 0.9
SF1-220ENST00000626028 ZNF835Q9Y2P0 537 aa20.69■□□□□ 0.9
SF1-220ENST00000626028 NINQ8N4C6 2090 aa20.69■□□□□ 0.9
SF1-220ENST00000626028 ZNF407Q9C0G0 2248 aa20.69■□□□□ 0.9
SF1-220ENST00000626028 WASHC1A8K0Z3 465 aa20.68■□□□□ 0.9
SF1-220ENST00000626028 UBFD1O14562 309 aaKnown RBP20.68■□□□□ 0.9
SF1-220ENST00000626028 DEKP35659 375 aaKnown RBP20.68■□□□□ 0.9
SF1-220ENST00000626028 MEOX1P50221 254 aa20.68■□□□□ 0.9
SF1-220ENST00000626028 HEPACAMQ14CZ8 416 aa20.68■□□□□ 0.9
SF1-220ENST00000626028 TCHHL1Q5QJ38 904 aaPredicted RBP20.68■□□□□ 0.9
SF1-220ENST00000626028 C16orf47Q6ZP98 133 aaPredicted RBP20.68■□□□□ 0.9
SF1-220ENST00000626028 Q6ZPB1 254 aaPredicted RBP20.68■□□□□ 0.9
SF1-220ENST00000626028 C4orf33Q8N1A6 199 aa20.68■□□□□ 0.9
SF1-220ENST00000626028 BANPQ8N9N5 519 aa20.68■□□□□ 0.9
SF1-220ENST00000626028 FAM76AQ8TAV0 307 aa20.68■□□□□ 0.9
SF1-220ENST00000626028 WWTR1Q9GZV5 400 aa20.68■□□□□ 0.9
SF1-220ENST00000626028 WBP11Q9Y2W2 641 aaKnown RBP20.68■□□□□ 0.9
SF1-220ENST00000626028 NPIPA5E9PKD4 350 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms