RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 PAGE3Q5JUK9 113 aa8.54□□□□□ -1.04
VCL-206ENST00000623461 C1orf220Q5T0J3 134 aa8.54□□□□□ -1.04
VCL-206ENST00000623461 DHRS4L2Q6PKH6 230 aa8.54□□□□□ -1.04
VCL-206ENST00000623461 SIAH1Q8IUQ4 282 aa8.54□□□□□ -1.04
VCL-206ENST00000623461 B3GNT7Q8NFL0 401 aa8.54□□□□□ -1.04
VCL-206ENST00000623461 SORCS1Q8WY21 1168 aa8.54□□□□□ -1.04
VCL-206ENST00000623461 C3orf49Q96BT1 292 aa8.54□□□□□ -1.04
VCL-206ENST00000623461 SPACA7Q96KW9 195 aa8.54□□□□□ -1.04
VCL-206ENST00000623461 FCRL1Q96LA6 429 aa8.54□□□□□ -1.04
VCL-206ENST00000623461 DHRS9Q9BPW9 319 aa8.54□□□□□ -1.04
VCL-206ENST00000623461 ATG5Q9H1Y0 275 aa8.54□□□□□ -1.04
VCL-206ENST00000623461 ZFP57Q9NU63 452 aa8.54□□□□□ -1.04
VCL-206ENST00000623461 ENPP4Q9Y6X5 453 aa8.54□□□□□ -1.04
VCL-206ENST00000623461 SLC35F4A4IF30 521 aa8.54□□□□□ -1.04
VCL-206ENST00000623461 UNC119BA6NIH7 251 aa8.54□□□□□ -1.04
VCL-206ENST00000623461 POLR1CO15160 346 aaPredicted RBP8.54□□□□□ -1.04
VCL-206ENST00000623461 RBMS1P29558 406 aaKnown RBP8.54□□□□□ -1.04
VCL-206ENST00000623461 MLLT6P55198 1093 aaPredicted RBP8.54□□□□□ -1.04
VCL-206ENST00000623461 DLX5P56178 289 aa8.54□□□□□ -1.04
VCL-206ENST00000623461 SLC35G1Q2M3R5 365 aa8.54□□□□□ -1.04
VCL-206ENST00000623461 CPZQ66K79 652 aa8.54□□□□□ -1.04
VCL-206ENST00000623461 PXKQ7Z7A4 578 aa8.54□□□□□ -1.04
VCL-206ENST00000623461 SERPINA11Q86U17 422 aa8.54□□□□□ -1.04
VCL-206ENST00000623461 GPR152Q8TDT2 470 aa8.54□□□□□ -1.04
VCL-206ENST00000623461 PMEPA1Q969W9 287 aa8.54□□□□□ -1.04
VCL-206ENST00000623461 LRRC46Q96FV0 321 aa8.54□□□□□ -1.04
VCL-206ENST00000623461 ARHGAP39Q9C0H5 1083 aa8.54□□□□□ -1.04
VCL-206ENST00000623461 MEPEQ9NQ76 525 aaPredicted RBP8.54□□□□□ -1.04
VCL-206ENST00000623461 CD84Q9UIB8 345 aa8.54□□□□□ -1.04
VCL-206ENST00000623461 UTS2RQ9UKP6 389 aa8.54□□□□□ -1.04
VCL-206ENST00000623461 PRSS44E7EML9 344 aa8.54□□□□□ -1.04
VCL-206ENST00000623461 H7C417 338 aa8.54□□□□□ -1.04
VCL-206ENST00000623461 TLX3O43711 291 aaPredicted RBP8.54□□□□□ -1.04
VCL-206ENST00000623461 MMP3P08254 477 aa8.54□□□□□ -1.04
VCL-206ENST00000623461 CDKN2DP55273 166 aa8.54□□□□□ -1.04
VCL-206ENST00000623461 TAP2Q03519 686 aa8.54□□□□□ -1.04
VCL-206ENST00000623461 CHRNA6Q15825 494 aa8.54□□□□□ -1.04
VCL-206ENST00000623461 ZNF783Q6ZMS7 281 aa8.54□□□□□ -1.04
VCL-206ENST00000623461 ISCA2Q86U28 154 aa8.54□□□□□ -1.04
VCL-206ENST00000623461 C12orf45Q8N5I9 185 aaPredicted RBP8.54□□□□□ -1.04
VCL-206ENST00000623461 FAM83FQ8NEG4 500 aaPredicted RBP8.54□□□□□ -1.04
VCL-206ENST00000623461 IMP4Q96G21 291 aaKnown RBP8.54□□□□□ -1.04
VCL-206ENST00000623461 LAMP5Q9UJQ1 280 aa8.54□□□□□ -1.04
VCL-206ENST00000623461 ZCWPW2A0A1B0GU75 182 aa8.53□□□□□ -1.04
VCL-206ENST00000623461 PRNPP04156 253 aa8.53□□□□□ -1.04
VCL-206ENST00000623461 MPC1LP0DKB6 136 aa8.53□□□□□ -1.04
VCL-206ENST00000623461 MLLT1Q03111 559 aaPredicted RBP8.53□□□□□ -1.04
VCL-206ENST00000623461 GNMTQ14749 295 aa8.53□□□□□ -1.04
VCL-206ENST00000623461 GPR149Q86SP6 731 aa8.53□□□□□ -1.04
VCL-206ENST00000623461 MRGPRX2Q96LB1 330 aa8.53□□□□□ -1.04
VCL-206ENST00000623461 P2RY13Q9BPV8 354 aa8.53□□□□□ -1.04
VCL-206ENST00000623461 OR2S2Q9NQN1 319 aa8.53□□□□□ -1.04
VCL-206ENST00000623461 RBFOX1Q9NWB1 397 aaKnown RBP8.53□□□□□ -1.04
VCL-206ENST00000623461 HEBP2Q9Y5Z4 205 aa8.53□□□□□ -1.04
VCL-206ENST00000623461 HS3ST4Q9Y661 456 aa8.53□□□□□ -1.04
VCL-206ENST00000623461 PEAK1Q9H792 1746 aa8.53□□□□□ -1.04
VCL-206ENST00000623461 VSTM5A8MXK1 200 aa8.53□□□□□ -1.04
VCL-206ENST00000623461 SLC22A5O76082 557 aa8.53□□□□□ -1.04
VCL-206ENST00000623461 POLR2CP19387 275 aaPredicted RBP8.53□□□□□ -1.04
VCL-206ENST00000623461 GABRB3P28472 473 aa8.53□□□□□ -1.04
VCL-206ENST00000623461 LASP1Q14847 261 aaKnown RBP8.53□□□□□ -1.04
VCL-206ENST00000623461 MS4A13Q5J8X5 152 aa8.53□□□□□ -1.04
VCL-206ENST00000623461 MOCOSQ96EN8 888 aa8.53□□□□□ -1.04
VCL-206ENST00000623461 IL12RB2Q99665 862 aa8.53□□□□□ -1.04
VCL-206ENST00000623461 OCEL1Q9H607 264 aa8.53□□□□□ -1.04
VCL-206ENST00000623461 SOHLH2Q9NX45 425 aa8.53□□□□□ -1.04
VCL-206ENST00000623461 PCTPQ9UKL6 214 aa8.53□□□□□ -1.04
VCL-206ENST00000623461 NAV1Q8NEY1 1877 aa8.53□□□□□ -1.04
VCL-206ENST00000623461 A0A0D9SG52 128 aa8.53□□□□□ -1.04
VCL-206ENST00000623461 ACOT8O14734 319 aa8.53□□□□□ -1.04
VCL-206ENST00000623461 SELENOWP63302 87 aa8.53□□□□□ -1.04
VCL-206ENST00000623461 POM121L1PQ3SYA9 428 aa8.53□□□□□ -1.04
VCL-206ENST00000623461 CLVS2Q5SYC1 327 aa8.53□□□□□ -1.04
VCL-206ENST00000623461 UBXN11Q5T124 520 aa8.53□□□□□ -1.04
VCL-206ENST00000623461 NDUFAF5Q5TEU4 345 aa8.53□□□□□ -1.04
VCL-206ENST00000623461 RFPL4BQ6ZWI9 263 aa8.53□□□□□ -1.04
VCL-206ENST00000623461 ZBED3Q96IU2 234 aaPredicted RBP8.53□□□□□ -1.04
VCL-206ENST00000623461 MCHR1Q99705 422 aa8.53□□□□□ -1.04
VCL-206ENST00000623461 RPS10P5Q9NQ39 176 aa8.53□□□□□ -1.04
VCL-206ENST00000623461 CRTAC1Q9NQ79 661 aa8.53□□□□□ -1.04
VCL-206ENST00000623461 TMEM39AQ9NV64 488 aa8.53□□□□□ -1.04
VCL-206ENST00000623461 PIGBOS1A0A0B4J2F0 54 aa8.53□□□□□ -1.04
VCL-206ENST00000623461 METTL15A6NJ78 407 aa8.53□□□□□ -1.04
VCL-206ENST00000623461 IFNA10P01566 189 aa8.53□□□□□ -1.04
VCL-206ENST00000623461 IFNA4P05014 189 aa8.53□□□□□ -1.04
VCL-206ENST00000623461 ATP5A1P25705 553 aaKnown RBP8.53□□□□□ -1.04
VCL-206ENST00000623461 PTPN6P29350 595 aa8.53□□□□□ -1.04
VCL-206ENST00000623461 PDX1P52945 283 aa8.53□□□□□ -1.04
VCL-206ENST00000623461 OR4D1Q15615 310 aa8.53□□□□□ -1.04
VCL-206ENST00000623461 Q8N9G6 341 aaPredicted RBP8.53□□□□□ -1.04
VCL-206ENST00000623461 ZNF527Q8NB42 609 aa8.53□□□□□ -1.04
VCL-206ENST00000623461 OR56A3Q8NH54 315 aa8.53□□□□□ -1.04
VCL-206ENST00000623461 C1orf74Q96LT6 269 aa8.53□□□□□ -1.04
VCL-206ENST00000623461 YIPF4Q9BSR8 244 aa8.53□□□□□ -1.04
VCL-206ENST00000623461 FBXO8Q9NRD0 319 aa8.53□□□□□ -1.04
VCL-206ENST00000623461 RIPK3Q9Y572 518 aa8.53□□□□□ -1.04
VCL-206ENST00000623461 KCTD3Q9Y597 815 aa8.53□□□□□ -1.04
VCL-206ENST00000623461 KDELR3O43731 214 aa8.53□□□□□ -1.04
VCL-206ENST00000623461 MMP20O60882 483 aa8.53□□□□□ -1.04
VCL-206ENST00000623461 CAPNS1P04632 268 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms