RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 OR9A2Q8NGT5 310 aa9.39□□□□□ -0.91
VTA1-205ENST00000620996 GAL3ST3Q96A11 431 aa9.39□□□□□ -0.91
VTA1-205ENST00000620996 TMEM19Q96HH6 336 aa9.39□□□□□ -0.91
VTA1-205ENST00000620996 AMDHD1Q96NU7 426 aa9.39□□□□□ -0.91
VTA1-205ENST00000620996 ZFYVE21Q9BQ24 234 aa9.39□□□□□ -0.91
VTA1-205ENST00000620996 OR51I1Q9H343 314 aa9.39□□□□□ -0.91
VTA1-205ENST00000620996 CLK4Q9HAZ1 481 aaKnown RBP9.39□□□□□ -0.91
VTA1-205ENST00000620996 CAPN10Q9HC96 672 aa9.39□□□□□ -0.91
VTA1-205ENST00000620996 THUMPD1Q9NXG2 353 aaKnown RBP9.39□□□□□ -0.91
VTA1-205ENST00000620996 RHCGQ9UBD6 479 aa9.39□□□□□ -0.91
VTA1-205ENST00000620996 CARD8Q9Y2G2 431 aa9.39□□□□□ -0.91
VTA1-205ENST00000620996 WBP11Q9Y2W2 641 aaKnown RBP9.39□□□□□ -0.91
VTA1-205ENST00000620996 H0YGG7 62 aa9.39□□□□□ -0.91
VTA1-205ENST00000620996 IFNA14P01570 189 aa9.39□□□□□ -0.91
VTA1-205ENST00000620996 CSNK2A2P19784 350 aaPredicted RBP9.39□□□□□ -0.91
VTA1-205ENST00000620996 MYF6P23409 242 aa9.39□□□□□ -0.91
VTA1-205ENST00000620996 ELK4P28324 431 aa9.39□□□□□ -0.91
VTA1-205ENST00000620996 POLR2IP36954 125 aaKnown RBP9.39□□□□□ -0.91
VTA1-205ENST00000620996 BUD31P41223 144 aaPredicted RBP9.39□□□□□ -0.91
VTA1-205ENST00000620996 LSSP48449 732 aa9.39□□□□□ -0.91
VTA1-205ENST00000620996 RAD23AP54725 363 aa9.39□□□□□ -0.91
VTA1-205ENST00000620996 ARF3P61204 181 aaPredicted RBP9.39□□□□□ -0.91
VTA1-205ENST00000620996 KCNAB2Q13303 367 aa9.39□□□□□ -0.91
VTA1-205ENST00000620996 SUZ12Q15022 739 aaKnown RBP9.39□□□□□ -0.91
VTA1-205ENST00000620996 GPR19Q15760 415 aa9.39□□□□□ -0.91
VTA1-205ENST00000620996 FAM92BQ6ZTR7 304 aa9.39□□□□□ -0.91
VTA1-205ENST00000620996 GPR155Q7Z3F1 870 aa9.39□□□□□ -0.91
VTA1-205ENST00000620996 WDR53Q7Z5U6 358 aaPredicted RBP9.39□□□□□ -0.91
VTA1-205ENST00000620996 RBCK1Q9BYM8 510 aa9.39□□□□□ -0.91
VTA1-205ENST00000620996 SEMA3GQ9NS98 782 aa9.39□□□□□ -0.91
VTA1-205ENST00000620996 EVA1BQ9NVM1 165 aa9.39□□□□□ -0.91
VTA1-205ENST00000620996 ASB4Q9Y574 426 aa9.39□□□□□ -0.91
VTA1-205ENST00000620996 URADA6NGE7 173 aa9.38□□□□□ -0.91
VTA1-205ENST00000620996 OR5K4A6NMS3 321 aa9.38□□□□□ -0.91
VTA1-205ENST00000620996 CHURC1-FNTBB4DL54 471 aa9.38□□□□□ -0.91
VTA1-205ENST00000620996 AGRPO00253 132 aa9.38□□□□□ -0.91
VTA1-205ENST00000620996 B3GALT2O43825 422 aa9.38□□□□□ -0.91
VTA1-205ENST00000620996 WNT1P04628 370 aa9.38□□□□□ -0.91
VTA1-205ENST00000620996 ARAFP10398 606 aa9.38□□□□□ -0.91
VTA1-205ENST00000620996 MATN1P21941 496 aa9.38□□□□□ -0.91
VTA1-205ENST00000620996 CD27P26842 260 aa9.38□□□□□ -0.91
VTA1-205ENST00000620996 MC3RP41968 323 aa9.38□□□□□ -0.91
VTA1-205ENST00000620996 CSNK1EP49674 416 aaKnown RBP9.38□□□□□ -0.91
VTA1-205ENST00000620996 PCBP4P57723 403 aaKnown RBP9.38□□□□□ -0.91
VTA1-205ENST00000620996 TRA2BP62995 288 aaKnown RBP9.38□□□□□ -0.91
VTA1-205ENST00000620996 SELENOWP63302 87 aa9.38□□□□□ -0.91
VTA1-205ENST00000620996 KCNJ10P78508 379 aa9.38□□□□□ -0.91
VTA1-205ENST00000620996 IL5RAQ01344 420 aa9.38□□□□□ -0.91
VTA1-205ENST00000620996 RBBP4Q09028 425 aa9.38□□□□□ -0.91
VTA1-205ENST00000620996 LTB4RQ15722 352 aa9.38□□□□□ -0.91
VTA1-205ENST00000620996 CLPPQ16740 277 aaPredicted RBP9.38□□□□□ -0.91
VTA1-205ENST00000620996 GPAT3Q53EU6 434 aa9.38□□□□□ -0.91
VTA1-205ENST00000620996 REEP3Q6NUK4 255 aa9.38□□□□□ -0.91
VTA1-205ENST00000620996 C8orf59Q8N0T1 100 aaPredicted RBP9.38□□□□□ -0.91
VTA1-205ENST00000620996 CAMKVQ8NCB2 501 aa9.38□□□□□ -0.91
VTA1-205ENST00000620996 UTP15Q8TED0 518 aaKnown RBP9.38□□□□□ -0.91
VTA1-205ENST00000620996 NEURL3Q96EH8 262 aa9.38□□□□□ -0.91
VTA1-205ENST00000620996 CNRIP1Q96F85 164 aaPredicted RBP9.38□□□□□ -0.91
VTA1-205ENST00000620996 COL21A1Q96P44 957 aa9.38□□□□□ -0.91
VTA1-205ENST00000620996 SLC38A3Q99624 504 aa9.38□□□□□ -0.91
VTA1-205ENST00000620996 ZNF696Q9H7X3 374 aa9.38□□□□□ -0.91
VTA1-205ENST00000620996 SIRT3Q9NTG7 399 aaPredicted RBP9.38□□□□□ -0.91
VTA1-205ENST00000620996 IFT80Q9P2H3 777 aaPredicted RBP9.38□□□□□ -0.91
VTA1-205ENST00000620996 C3orf18Q9UK00 162 aa9.38□□□□□ -0.91
VTA1-205ENST00000620996 PSME2Q9UL46 239 aa9.38□□□□□ -0.91
VTA1-205ENST00000620996 A0A0J9YY10 115 aa9.38□□□□□ -0.91
VTA1-205ENST00000620996 OR2A25A4D2G3 310 aa9.38□□□□□ -0.91
VTA1-205ENST00000620996 H3BNH8 94 aa9.38□□□□□ -0.91
VTA1-205ENST00000620996 J3KTA2 159 aa9.38□□□□□ -0.91
VTA1-205ENST00000620996 TNFRSF11BO00300 401 aa9.38□□□□□ -0.91
VTA1-205ENST00000620996 DNAJB6O75190 326 aa9.38□□□□□ -0.91
VTA1-205ENST00000620996 GCM2O75603 506 aaPredicted RBP9.38□□□□□ -0.91
VTA1-205ENST00000620996 IGLV3-19P01714 112 aa9.38□□□□□ -0.91
VTA1-205ENST00000620996 TCEA1P23193 301 aaKnown RBP9.38□□□□□ -0.91
VTA1-205ENST00000620996 GSTM2P28161 218 aa9.38□□□□□ -0.91
VTA1-205ENST00000620996 DNAJA1P31689 397 aaKnown RBP9.38□□□□□ -0.91
VTA1-205ENST00000620996 PIGAP37287 484 aa9.38□□□□□ -0.91
VTA1-205ENST00000620996 CRYBA2P53672 197 aa9.38□□□□□ -0.91
VTA1-205ENST00000620996 DUSP2Q05923 314 aa9.38□□□□□ -0.91
VTA1-205ENST00000620996 ELOCQ15369 112 aa9.38□□□□□ -0.91
VTA1-205ENST00000620996 SYPL1Q16563 259 aa9.38□□□□□ -0.91
VTA1-205ENST00000620996 PUS10Q3MIT2 529 aaKnown RBP9.38□□□□□ -0.91
VTA1-205ENST00000620996 LEXMQ3ZCV2 418 aa9.38□□□□□ -0.91
VTA1-205ENST00000620996 SAXO2Q658L1 398 aa9.38□□□□□ -0.91
VTA1-205ENST00000620996 ABHD13Q7L211 337 aa9.38□□□□□ -0.91
VTA1-205ENST00000620996 PRSS41Q7RTY9 318 aa9.38□□□□□ -0.91
VTA1-205ENST00000620996 TAGAPQ8N103 731 aa9.38□□□□□ -0.91
VTA1-205ENST00000620996 NATD1Q8N6N6 113 aa9.38□□□□□ -0.91
VTA1-205ENST00000620996 CSNK1A1LQ8N752 337 aa9.38□□□□□ -0.91
VTA1-205ENST00000620996 FNDC8Q8TC99 324 aa9.38□□□□□ -0.91
VTA1-205ENST00000620996 SLC38A5Q8WUX1 472 aa9.38□□□□□ -0.91
VTA1-205ENST00000620996 POP5Q969H6 163 aaKnown RBP9.38□□□□□ -0.91
VTA1-205ENST00000620996 SPACA7Q96KW9 195 aa9.38□□□□□ -0.91
VTA1-205ENST00000620996 KRT84Q9NSB2 600 aa9.38□□□□□ -0.91
VTA1-205ENST00000620996 ZNF639Q9UID6 485 aa9.38□□□□□ -0.91
VTA1-205ENST00000620996 MRPS2Q9Y399 296 aaKnown RBP9.38□□□□□ -0.91
VTA1-205ENST00000620996 TOR1BO14657 336 aa9.37□□□□□ -0.91
VTA1-205ENST00000620996 PRSS23O95084 383 aa9.37□□□□□ -0.91
VTA1-205ENST00000620996 IL7RP16871 459 aa9.37□□□□□ -0.91
VTA1-205ENST00000620996 PPP2R1BP30154 601 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms