RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 GALNT18Q6P9A2 607 aa23.11■■□□□ 1.29
PMS1-220ENST00000618056 TRIM46Q7Z4K8 759 aa23.11■■□□□ 1.29
PMS1-220ENST00000618056 RIT1Q92963 219 aa23.11■■□□□ 1.29
PMS1-220ENST00000618056 SDAD1Q9NVU7 687 aaKnown RBP eCLIP23.11■■□□□ 1.29
PMS1-220ENST00000618056 ASPDHA6ND91 283 aa23.1■■□□□ 1.29
PMS1-220ENST00000618056 NME2P1O60361 137 aa23.1■■□□□ 1.29
PMS1-220ENST00000618056 OR2J2O76002 312 aa23.1■■□□□ 1.29
PMS1-220ENST00000618056 UROSP10746 265 aa23.1■■□□□ 1.29
PMS1-220ENST00000618056 NME2P22392 152 aa23.1■■□□□ 1.29
PMS1-220ENST00000618056 TDGF1P3P51864 188 aa23.1■■□□□ 1.29
PMS1-220ENST00000618056 RAE1P78406 368 aaKnown RBP23.1■■□□□ 1.29
PMS1-220ENST00000618056 ELOAQ14241 798 aaKnown RBP23.1■■□□□ 1.29
PMS1-220ENST00000618056 EIF2S3LQ2VIR3 472 aaKnown RBP23.1■■□□□ 1.29
PMS1-220ENST00000618056 GALNTL5Q7Z4T8 443 aa23.1■■□□□ 1.29
PMS1-220ENST00000618056 GPALPP1Q8IXQ4 340 aa23.1■■□□□ 1.29
PMS1-220ENST00000618056 NUBPLQ8TB37 319 aa23.1■■□□□ 1.29
PMS1-220ENST00000618056 TMEM125Q96AQ2 219 aa23.1■■□□□ 1.29
PMS1-220ENST00000618056 APIPQ96GX9 242 aa23.1■■□□□ 1.29
PMS1-220ENST00000618056 FAIM2Q9BWQ8 316 aa23.1■■□□□ 1.29
PMS1-220ENST00000618056 CXorf21Q9HAI6 301 aa23.1■■□□□ 1.29
PMS1-220ENST00000618056 TNFRSF12AQ9NP84 129 aa23.1■■□□□ 1.29
PMS1-220ENST00000618056 A0A1W2PS29 197 aa23.09■■□□□ 1.29
PMS1-220ENST00000618056 HRKO00198 91 aa23.09■■□□□ 1.29
PMS1-220ENST00000618056 TYROBPO43914 113 aa23.09■■□□□ 1.29
PMS1-220ENST00000618056 PCDH7O60245 1069 aa23.09■■□□□ 1.29
PMS1-220ENST00000618056 CRCPO75575 148 aa23.09■■□□□ 1.29
PMS1-220ENST00000618056 CREB1P16220 341 aa23.09■■□□□ 1.29
PMS1-220ENST00000618056 ALDH3A1P30838 453 aa23.09■■□□□ 1.29
PMS1-220ENST00000618056 XKP51811 444 aa23.09■■□□□ 1.29
PMS1-220ENST00000618056 FHL5Q5TD97 284 aa23.09■■□□□ 1.29
PMS1-220ENST00000618056 C16orf47Q6ZP98 133 aaPredicted RBP23.09■■□□□ 1.29
PMS1-220ENST00000618056 C9orf40Q8IXQ3 194 aa23.09■■□□□ 1.29
PMS1-220ENST00000618056 CYP4Z2PQ8N1L4 340 aa23.09■■□□□ 1.29
PMS1-220ENST00000618056 RASL10BQ96S79 203 aa23.09■■□□□ 1.29
PMS1-220ENST00000618056 LIN28AQ9H9Z2 209 aaKnown RBP23.09■■□□□ 1.29
PMS1-220ENST00000618056 DOPEY1Q5JWR5 2465 aa23.08■■□□□ 1.29
PMS1-220ENST00000618056 WWP2O00308 870 aa23.08■■□□□ 1.29
PMS1-220ENST00000618056 RGS16O15492 202 aaPredicted RBP23.08■■□□□ 1.29
PMS1-220ENST00000618056 CPMP14384 443 aa23.08■■□□□ 1.29
PMS1-220ENST00000618056 TIA1P31483 386 aaKnown RBP eCLIP23.08■■□□□ 1.29
PMS1-220ENST00000618056 ERVK-8P63133 956 aa23.08■■□□□ 1.29
PMS1-220ENST00000618056 ZNF267Q14586 743 aaPredicted RBP23.08■■□□□ 1.29
PMS1-220ENST00000618056 MPEG1Q2M385 716 aa23.08■■□□□ 1.29
PMS1-220ENST00000618056 SCIMPQ6UWF3 145 aa23.08■■□□□ 1.29
PMS1-220ENST00000618056 HOMEZQ8IX15 550 aa23.08■■□□□ 1.29
PMS1-220ENST00000618056 FAM98AQ8NCA5 519 aaKnown RBP23.08■■□□□ 1.29
PMS1-220ENST00000618056 CNPPD1Q9BV87 410 aa23.08■■□□□ 1.29
PMS1-220ENST00000618056 RYDENQ9NUL5 291 aaKnown RBP23.08■■□□□ 1.29
PMS1-220ENST00000618056 PSME2Q9UL46 239 aa23.08■■□□□ 1.29
PMS1-220ENST00000618056 ERVK-19Q9WJR5 959 aa23.08■■□□□ 1.29
PMS1-220ENST00000618056 ICE1Q9Y2F5 2266 aa23.07■■□□□ 1.28
PMS1-220ENST00000618056 GOLGA6L10A6NI86 522 aa23.07■■□□□ 1.28
PMS1-220ENST00000618056 NPHS1O60500 1241 aa23.07■■□□□ 1.28
PMS1-220ENST00000618056 PORP16435 677 aaPredicted RBP23.07■■□□□ 1.28
PMS1-220ENST00000618056 SERPINB3P29508 390 aa23.07■■□□□ 1.28
PMS1-220ENST00000618056 GSTM5P46439 218 aa23.07■■□□□ 1.28
PMS1-220ENST00000618056 SLC37A1P57057 533 aa23.07■■□□□ 1.28
PMS1-220ENST00000618056 PMP22Q01453 160 aa23.07■■□□□ 1.28
PMS1-220ENST00000618056 MAPKAPK3Q16644 382 aa23.07■■□□□ 1.28
PMS1-220ENST00000618056 PRR7Q8TB68 274 aa23.07■■□□□ 1.28
PMS1-220ENST00000618056 ASB15Q8WXK1 588 aa23.07■■□□□ 1.28
PMS1-220ENST00000618056 FRMD6Q96NE9 622 aa23.07■■□□□ 1.28
PMS1-220ENST00000618056 SHCBP1LQ9BZQ2 653 aa23.07■■□□□ 1.28
PMS1-220ENST00000618056 KLF13Q9Y2Y9 288 aaPredicted RBP23.07■■□□□ 1.28
PMS1-220ENST00000618056 GNG14A0A1W2PPG7 69 aa23.06■■□□□ 1.28
PMS1-220ENST00000618056 OR6C76A6NM76 312 aa23.06■■□□□ 1.28
PMS1-220ENST00000618056 A8MVJ9 347 aa23.06■■□□□ 1.28
PMS1-220ENST00000618056 DRD2P14416 443 aa23.06■■□□□ 1.28
PMS1-220ENST00000618056 ETV4P43268 484 aa23.06■■□□□ 1.28
PMS1-220ENST00000618056 RNF111Q6ZNA4 994 aa23.06■■□□□ 1.28
PMS1-220ENST00000618056 RNF165Q6ZSG1 346 aa23.06■■□□□ 1.28
PMS1-220ENST00000618056 CROCCP2Q86T23 111 aa23.06■■□□□ 1.28
PMS1-220ENST00000618056 GALNT12Q8IXK2 581 aa23.06■■□□□ 1.28
PMS1-220ENST00000618056 MMP21Q8N119 569 aa23.06■■□□□ 1.28
PMS1-220ENST00000618056 ZIM3Q96PE6 472 aa23.06■■□□□ 1.28
PMS1-220ENST00000618056 MECRQ9BV79 373 aa23.06■■□□□ 1.28
PMS1-220ENST00000618056 HPF1Q9NWY4 346 aa23.06■■□□□ 1.28
PMS1-220ENST00000618056 DLGAP4Q9Y2H0 992 aa23.06■■□□□ 1.28
PMS1-220ENST00000618056 MYO7BQ6PIF6 2116 aa23.06■■□□□ 1.28
PMS1-220ENST00000618056 NPIPB8E9PQR5 432 aa23.05■■□□□ 1.28
PMS1-220ENST00000618056 AZIN1O14977 448 aa23.05■■□□□ 1.28
PMS1-220ENST00000618056 RSL1D1O76021 490 aaKnown RBP23.05■■□□□ 1.28
PMS1-220ENST00000618056 OR6B1O95007 311 aa23.05■■□□□ 1.28
PMS1-220ENST00000618056 CLPSP04118 112 aa23.05■■□□□ 1.28
PMS1-220ENST00000618056 MST1P26927 711 aa23.05■■□□□ 1.28
PMS1-220ENST00000618056 SOX3P41225 446 aa23.05■■□□□ 1.28
PMS1-220ENST00000618056 FUT7Q11130 342 aa23.05■■□□□ 1.28
PMS1-220ENST00000618056 IMPG1Q17R60 797 aa23.05■■□□□ 1.28
PMS1-220ENST00000618056 TNFAIP8L3Q5GJ75 292 aa23.05■■□□□ 1.28
PMS1-220ENST00000618056 SPDYAQ5MJ70 313 aa23.05■■□□□ 1.28
PMS1-220ENST00000618056 CLEC6AQ6EIG7 209 aa23.05■■□□□ 1.28
PMS1-220ENST00000618056 FAM76AQ8TAV0 307 aa23.05■■□□□ 1.28
PMS1-220ENST00000618056 METTL2AQ96IZ6 378 aaKnown RBP23.05■■□□□ 1.28
PMS1-220ENST00000618056 SSU72Q9NP77 194 aaKnown RBP23.05■■□□□ 1.28
PMS1-220ENST00000618056 TIMMDC1Q9NPL8 285 aa23.05■■□□□ 1.28
PMS1-220ENST00000618056 HEY2Q9UBP5 337 aa23.05■■□□□ 1.28
PMS1-220ENST00000618056 ERVK-11Q9UQG0 969 aa23.05■■□□□ 1.28
PMS1-220ENST00000618056 ERAL1O75616 437 aaKnown RBP23.05■■□□□ 1.28
PMS1-220ENST00000618056 ATP1B1P05026 303 aa23.05■■□□□ 1.28
PMS1-220ENST00000618056 FGF4P08620 206 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms