RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 LRIF1Q5T3J3 769 aa16.36■□□□□ 0.21
PPFIA3-207ENST00000602716 TTC33Q6PID6 262 aaPredicted RBP16.36■□□□□ 0.21
PPFIA3-207ENST00000602716 R3HCC1LQ7Z5L2 792 aaKnown RBP16.36■□□□□ 0.21
PPFIA3-207ENST00000602716 IFNEQ86WN2 208 aa16.36■□□□□ 0.21
PPFIA3-207ENST00000602716 SLITRK4Q8IW52 837 aa16.36■□□□□ 0.21
PPFIA3-207ENST00000602716 CARFQ8N187 725 aa16.36■□□□□ 0.21
PPFIA3-207ENST00000602716 OR4D9Q8NGE8 314 aa16.36■□□□□ 0.21
PPFIA3-207ENST00000602716 CCDC115Q96NT0 180 aa16.36■□□□□ 0.21
PPFIA3-207ENST00000602716 RBCK1Q9BYM8 510 aa16.36■□□□□ 0.21
PPFIA3-207ENST00000602716 BHLHE41Q9C0J9 482 aaPredicted RBP16.36■□□□□ 0.21
PPFIA3-207ENST00000602716 FTSJ1Q9UET6 329 aa16.36■□□□□ 0.21
PPFIA3-207ENST00000602716 ANAPC2Q9UJX6 822 aa16.36■□□□□ 0.21
PPFIA3-207ENST00000602716 DAPP1Q9UN19 280 aa16.36■□□□□ 0.21
PPFIA3-207ENST00000602716 TMEM184BQ9Y519 407 aaPredicted RBP16.36■□□□□ 0.21
PPFIA3-207ENST00000602716 OTOGLQ3ZCN5 2332 aa16.36■□□□□ 0.21
PPFIA3-207ENST00000602716 A0A096LPI6 279 aa16.35■□□□□ 0.21
PPFIA3-207ENST00000602716 RNF103-CHMP3A0A140T963 221 aa16.35■□□□□ 0.21
PPFIA3-207ENST00000602716 URADA6NGE7 173 aa16.35■□□□□ 0.21
PPFIA3-207ENST00000602716 NTN3O00634 580 aaPredicted RBP16.35■□□□□ 0.21
PPFIA3-207ENST00000602716 B3GALT2O43825 422 aa16.35■□□□□ 0.21
PPFIA3-207ENST00000602716 UMPSP11172 480 aa16.35■□□□□ 0.21
PPFIA3-207ENST00000602716 TGM1P22735 817 aa16.35■□□□□ 0.21
PPFIA3-207ENST00000602716 SOX11P35716 441 aa16.35■□□□□ 0.21
PPFIA3-207ENST00000602716 HBA1P69905 142 aa16.35■□□□□ 0.21
PPFIA3-207ENST00000602716 SHC2P98077 582 aa16.35■□□□□ 0.21
PPFIA3-207ENST00000602716 MAT1AQ00266 395 aaKnown RBP16.35■□□□□ 0.21
PPFIA3-207ENST00000602716 TNFRSF17Q02223 184 aa16.35■□□□□ 0.21
PPFIA3-207ENST00000602716 MSANTD1Q6ZTZ1 278 aa16.35■□□□□ 0.21
PPFIA3-207ENST00000602716 NAXDQ8IW45 347 aa16.35■□□□□ 0.21
PPFIA3-207ENST00000602716 CA13Q8N1Q1 262 aa16.35■□□□□ 0.21
PPFIA3-207ENST00000602716 ZNF786Q8N393 782 aa16.35■□□□□ 0.21
PPFIA3-207ENST00000602716 B4GALNT2Q8NHY0 566 aa16.35■□□□□ 0.21
PPFIA3-207ENST00000602716 MTERF3Q96E29 417 aa16.35■□□□□ 0.21
PPFIA3-207ENST00000602716 PANX1Q96RD7 426 aa16.35■□□□□ 0.21
PPFIA3-207ENST00000602716 CPPED1Q9BRF8 314 aaPredicted RBP16.35■□□□□ 0.21
PPFIA3-207ENST00000602716 NLNQ9BYT8 704 aa16.35■□□□□ 0.21
PPFIA3-207ENST00000602716 RMND5AQ9H871 391 aa16.35■□□□□ 0.21
PPFIA3-207ENST00000602716 HCN3Q9P1Z3 774 aa16.35■□□□□ 0.21
PPFIA3-207ENST00000602716 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.35■□□□□ 0.21
PPFIA3-207ENST00000602716 ACSL6Q9UKU0 697 aa16.35■□□□□ 0.21
PPFIA3-207ENST00000602716 HYKKA2RU49 373 aa16.35■□□□□ 0.21
PPFIA3-207ENST00000602716 FITM1A5D6W6 292 aa16.35■□□□□ 0.21
PPFIA3-207ENST00000602716 FAM227AF5H4B4 570 aa16.35■□□□□ 0.21
PPFIA3-207ENST00000602716 RNASET2O00584 256 aaKnown RBP16.35■□□□□ 0.21
PPFIA3-207ENST00000602716 NPPAP01160 153 aa16.35■□□□□ 0.21
PPFIA3-207ENST00000602716 NR2F6P10588 404 aa16.35■□□□□ 0.21
PPFIA3-207ENST00000602716 CLDN6P56747 220 aa16.35■□□□□ 0.21
PPFIA3-207ENST00000602716 SIM1P81133 766 aaPredicted RBP16.35■□□□□ 0.21
PPFIA3-207ENST00000602716 HPCAP84074 193 aa16.35■□□□□ 0.21
PPFIA3-207ENST00000602716 SYT16Q17RD7 645 aa16.35■□□□□ 0.21
PPFIA3-207ENST00000602716 AASDHQ4L235 1098 aaPredicted RBP16.35■□□□□ 0.21
PPFIA3-207ENST00000602716 MANEAQ5SRI9 462 aa16.35■□□□□ 0.21
PPFIA3-207ENST00000602716 ZNF551Q7Z340 670 aaPredicted RBP16.35■□□□□ 0.21
PPFIA3-207ENST00000602716 ADAMTS16Q8TE57 1224 aa16.35■□□□□ 0.21
PPFIA3-207ENST00000602716 ZNF501Q96CX3 271 aaPredicted RBP16.35■□□□□ 0.21
PPFIA3-207ENST00000602716 GFM1Q96RP9 751 aaKnown RBP16.35■□□□□ 0.21
PPFIA3-207ENST00000602716 PIF1Q9H611 641 aa16.35■□□□□ 0.21
PPFIA3-207ENST00000602716 TMEM9BQ9NQ34 198 aa16.35■□□□□ 0.21
PPFIA3-207ENST00000602716 LYARQ9NX58 379 aaKnown RBP16.35■□□□□ 0.21
PPFIA3-207ENST00000602716 UTS2RQ9UKP6 389 aa16.35■□□□□ 0.21
PPFIA3-207ENST00000602716 CES1P1Q9UKY3 287 aa16.35■□□□□ 0.21
PPFIA3-207ENST00000602716 C4orf47A7E2U8 309 aa16.34■□□□□ 0.21
PPFIA3-207ENST00000602716 EI24O14681 340 aa16.34■□□□□ 0.21
PPFIA3-207ENST00000602716 TBX19O60806 448 aa16.34■□□□□ 0.21
PPFIA3-207ENST00000602716 CBFA2T3O75081 653 aa16.34■□□□□ 0.21
PPFIA3-207ENST00000602716 OR2B3O76000 313 aa16.34■□□□□ 0.21
PPFIA3-207ENST00000602716 ANKRD34CP0C6C1 535 aa16.34■□□□□ 0.21
PPFIA3-207ENST00000602716 C8orf89P0DMQ9 161 aa16.34■□□□□ 0.21
PPFIA3-207ENST00000602716 SPTBP11277 2137 aa16.34■□□□□ 0.21
PPFIA3-207ENST00000602716 PCSK2P16519 638 aa16.34■□□□□ 0.21
PPFIA3-207ENST00000602716 HTR1EP28566 365 aa16.34■□□□□ 0.21
PPFIA3-207ENST00000602716 DUSP3P51452 185 aaPredicted RBP16.34■□□□□ 0.21
PPFIA3-207ENST00000602716 LRRC23Q53EV4 343 aaPredicted RBP16.34■□□□□ 0.21
PPFIA3-207ENST00000602716 OR4A15Q8NGL6 344 aa16.34■□□□□ 0.21
PPFIA3-207ENST00000602716 PNPT1Q8TCS8 783 aaKnown RBP16.34■□□□□ 0.21
PPFIA3-207ENST00000602716 CNRIP1Q96F85 164 aaPredicted RBP16.34■□□□□ 0.21
PPFIA3-207ENST00000602716 ANKHQ9HCJ1 492 aa16.34■□□□□ 0.21
PPFIA3-207ENST00000602716 FGF21Q9NSA1 209 aa16.34■□□□□ 0.21
PPFIA3-207ENST00000602716 ATAD3AQ9NVI7 634 aa16.34■□□□□ 0.21
PPFIA3-207ENST00000602716 DHCR7Q9UBM7 475 aaKnown RBP16.34■□□□□ 0.21
PPFIA3-207ENST00000602716 ZNF639Q9UID6 485 aa16.34■□□□□ 0.21
PPFIA3-207ENST00000602716 BTNL2Q9UIR0 455 aa16.34■□□□□ 0.21
PPFIA3-207ENST00000602716 CUL9Q8IWT3 2517 aa16.34■□□□□ 0.21
PPFIA3-207ENST00000602716 ASCC3Q8N3C0 2202 aaKnown RBP16.33■□□□□ 0.21
PPFIA3-207ENST00000602716 COL5A1P20908 1838 aaPredicted RBP16.33■□□□□ 0.21
PPFIA3-207ENST00000602716 PDPK1O15530 556 aa16.33■□□□□ 0.21
PPFIA3-207ENST00000602716 CPN2P22792 545 aa16.33■□□□□ 0.21
PPFIA3-207ENST00000602716 ACP1P24666 158 aa16.33■□□□□ 0.21
PPFIA3-207ENST00000602716 RPL3P39023 403 aaKnown RBP16.33■□□□□ 0.21
PPFIA3-207ENST00000602716 GCGRP47871 477 aa16.33■□□□□ 0.21
PPFIA3-207ENST00000602716 INAVAQ3KP66 663 aa16.33■□□□□ 0.21
PPFIA3-207ENST00000602716 CCDC157Q569K6 752 aa16.33■□□□□ 0.21
PPFIA3-207ENST00000602716 RUNDC3AQ59EK9 446 aa16.33■□□□□ 0.21
PPFIA3-207ENST00000602716 PHF19Q5T6S3 580 aa16.33■□□□□ 0.21
PPFIA3-207ENST00000602716 SLC48A1Q6P1K1 146 aa16.33■□□□□ 0.21
PPFIA3-207ENST00000602716 KMT5CQ86Y97 462 aa16.33■□□□□ 0.21
PPFIA3-207ENST00000602716 CYGBQ8WWM9 190 aa16.33■□□□□ 0.21
PPFIA3-207ENST00000602716 FBXL20Q96IG2 436 aa16.33■□□□□ 0.21
PPFIA3-207ENST00000602716 FAIM2Q9BWQ8 316 aa16.33■□□□□ 0.21
PPFIA3-207ENST00000602716 ROGDIQ9GZN7 287 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms